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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00068020 ID=TCONS_00068020|Name=TCONS_00068020|organism=Clytia hemisphaerica|type=transcript|length=1087bp
AAACCTTAGAAAAATTACTGTAACATCGGCAAGttagtgcagaaacaatt
tgtagtcatgtgctacctaaattgtgcagactaccgggctaacTTAATGG
AGTGGCCCATttgcttctacaaaaccttagaaagataacagtaacattgg
caagtcagtgtggaaacaatttgtagttatgtgctacctaaattgtgcag
actaccgggctaccttaatggaaaggcccgtttgcttctacaaaacctta
gaaagataacagtaacattggcaagtcagtgtggaaacaatttgtagtta
tgtgctacctaaattgtgcagactaccgggctaccttaatggaaaggccc
gtttgcttctacaaaaccttagaaagattaTTGTAACATTTGGAaagtca
gtgtggaaacaatttgtagtcatgtgctacctaaattttgcagactaccg
ggctaccttaatggagcagCCCGTTTGCTTCTGCGTAAAAACCTTGAATA
CTATTTCCGACTTTTTTCTGGTACAAGCCATTTATATTGAAATCAAAgct
ctttgtatttttttttcaggaaaagtgAATTGCAAACCCGGAAGGGAAAC
GTCATCTACTTGTCTACATCTCTACAAGTCGTCTTCAAAAGGAGACTGAT
TAACCGAACGCAAGAAAGAAAGAACTGTTTGCCTGAGATGCCAAGACTAA
TGGTAGAAGTTAGGACATGAAAATCGTTTATCGTGTATGATAGCAAGATT
TTGACGGTGGAGCCGCTTCCACTCGGTTTCTTATGTTTAATGGTTTTGTT
TTACTTGTTCCAAGAATACTATCCAACAGACAGAGCTGATTACCTACATG
CATGACAATCTAGCACCGGATCGTCTTCAAAGAAACTTGTTGTAAAGATT
CTCATTACGAAAGCTTTAATAATGCAGTAAAAAGACTTCAGAATTTCTAC
CCAGCGATTTCGACACCTCTATGTCACAGAGCCACTGGGACCCCCGccca
actggaaaatttgacaaaaatttcgtcccggtaggaaaaaaacctgaaat
ttcagtcccactgctgggaaattaactttgattcCTT Run BLAST on NCBI transcript from alignment at scaffold_478:553877..555138+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00068020 ID=TCONS_00068020|Name=TCONS_00068020|organism=Clytia hemisphaerica|type=transcript|length=1262bp|location=Sequence derived from alignment at scaffold_478:553877..555138+ (Clytia hemisphaerica)
AAACCTTAGAAAAATTACTGTAACATCGGCAAGttagtgcagaaacaatt
tgtagtcatgtgctacctaaattgtgcagactaccgggctaacTTAATGG
AGTGGCCCATttgcttctacaaaaccttagaaagataacagtaacattgg
caagtcagtgtggaaacaatttgtagttatgtgctacctaaattgtgcag
actaccgggctaccttaatggaaaggcccgtttgcttctacaaaacctta
gaaagataacagtaacattggcaagtcagtgtggaaacaatttgtagtta
tgtgctacctaaattgtgcagactaccgggctaccttaatggaaaggccc
gtttgcttctacaaaaccttagaaagattaTTGTAACATTTGGAaagtca
gtgtggaaacaatttgtagtcatgtgctacctaaattttgcagactaccg
ggctaccttaatggagcagCCCGTTTGCTTCTGCGTAAAAACCTTGAATA
CTATTTCCGACTTTTTTCTGGTACAAGCCATTTATATTGAAATCAAAgct
ctttgtatttttttttcaggaaaagtgAATTGCAAACCCGGAAGGGAAAC
GTCATCTACTTGTCTACATCTCTACAAGTCGTCTTCAAAAGGTAAGAAAA
TTTCTGTAATTGTTTACCCAGCACCTTCAATATTTGCAACTTCATCACTC
CAAGTACAAAATCTTTTCAGAGTCATTTAGCAAACGTAGGTGGAAAGAAG
CACTTACTTATCTTTGAGCTATGTTGGCTTGTGAAGTCTAATATATTCTA
ATTTCCTTTTCTACAGGAGACTGATTAACCGAACGCAAGAAAGAAAGAAC
TGTTTGCCTGAGATGCCAAGACTAATGGTAGAAGTTAGGACATGAAAATC
GTTTATCGTGTATGATAGCAAGATTTTGACGGTGGAGCCGCTTCCACTCG
GTTTCTTATGTTTAATGGTTTTGTTTTACTTGTTCCAAGAATACTATCCA
ACAGACAGAGCTGATTACCTACATGCATGACAATCTAGCACCGGATCGTC
TTCAAAGAAACTTGTTGTAAAGATTCTCATTACGAAAGCTTTAATAATGC
AGTAAAAAGACTTCAGAATTTCTACCCAGCGATTTCGACACCTCTATGTC
ACAGAGCCACTGGGACCCCCGcccaactggaaaatttgacaaaaatttcg
tcccggtaggaaaaaaacctgaaatttcagtcccactgctgggaaattaa
ctttgattcCTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00068020-exon-scaffold_478-1491911889:553877..554517 | TCONS_00068020-exon-scaffold_478-1491911889:553877..554517 | Clytia hemisphaerica | exon |
| TCONS_00068020-exon-scaffold_478-1510915933:553877..554517 | TCONS_00068020-exon-scaffold_478-1510915933:553877..554517 | Clytia hemisphaerica | exon |
| TCONS_00068020-exon-scaffold_478-1575043694:553877..554517 | TCONS_00068020-exon-scaffold_478-1575043694:553877..554517 | Clytia hemisphaerica | exon |
| TCONS_00068020-exon-scaffold_478-1491911889:554693..555138 | TCONS_00068020-exon-scaffold_478-1491911889:554693..555138 | Clytia hemisphaerica | exon |
| TCONS_00068020-exon-scaffold_478-1510915933:554693..555138 | TCONS_00068020-exon-scaffold_478-1510915933:554693..555138 | Clytia hemisphaerica | exon |
| TCONS_00068020-exon-scaffold_478-1575043694:554693..555138 | TCONS_00068020-exon-scaffold_478-1575043694:554693..555138 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_478 | supercontig | scaffold_478:553877..555138 + |
Blast
The following BLAST results are available for this feature:
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