TCONS_00067947 (transcript) - C. hemisphaerica

Overview
NameTCONS_00067947
Unique NameTCONS_00067947
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length85

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00067947 ID=TCONS_00067947|Name=TCONS_00067947|organism=Clytia hemisphaerica|type=transcript|length=85bp
CCGTTATTACCccaaaatgggaaaaaagctGGGGTAAAAACGGGACACTG
TCactaattttgttgaaagtccttTAAATGATTGC
Run BLAST on NCBI

transcript from alignment at scaffold_477:133878..133962

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00067947 ID=TCONS_00067947|Name=TCONS_00067947|organism=Clytia hemisphaerica|type=transcript|length=85bp|location=Sequence derived from alignment at scaffold_477:133878..133962 (Clytia hemisphaerica)
GCAATCATTTAaaggactttcaacaaaattagtGACAGTGTCCCGTTTTT
ACCCCagcttttttcccattttggGGTAATAACGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_042430XLOC_042430Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00067947-exon-scaffold_477-1491911889:133878..133962TCONS_00067947-exon-scaffold_477-1491911889:133878..133962Clytia hemisphaericaexon
TCONS_00067947-exon-scaffold_477-1510915933:133878..133962TCONS_00067947-exon-scaffold_477-1510915933:133878..133962Clytia hemisphaericaexon
TCONS_00067947-exon-scaffold_477-1575043694:133878..133962TCONS_00067947-exon-scaffold_477-1575043694:133878..133962Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_477supercontigscaffold_477:133878..133962 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00067947 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top