TCONS_00067880 (transcript) - C. hemisphaerica

Overview
NameTCONS_00067880
Unique NameTCONS_00067880
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2360

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00067880 ID=TCONS_00067880|Name=TCONS_00067880|organism=Clytia hemisphaerica|type=transcript|length=2360bp
ataacactcATATTGCAGTATTTATACGGATtaaaataaacaattctaat
gaaattattgtttttatctttacagacaaacaaacaaatataatgaaaaa
tagaaacaaaaaatattgaaccGAATCAACGAGACACAAttagaaaagta
aaaatgtaTGAAGACAACTCACAAAGAGAGCCTTTGCTCGCCGCAGCTGG
TGGTACTGGTCAAGAAAACTTTCAgcctcaacaacaacaacaaaatggaT
TTTTTGGTGGATTCAACTTTGGTCAATACCATCAATATCCTTCCTTCCAA
ACAAATGGTTCTTTGAATTTCCCAGCTGTTCCAGGGTCAAATCTACCACA
GTTATCAGGTGCGGATTTAGACTTTTTACCAACTGAACCGCCAGACTTTA
TCATTGACAATGCtgtttttccaaaagaaatatgCAAAAAACAGCaacga
aagaaagaaaagatgaCACAGATGGTAAAGTCGGTACAACGAATCAATTG
TGATGACATCAAGCTAAATATCATCCTTCAGACGACCACTAATTCATTAG
AATGGGTGGACAAAATTGACGTCATAGTCCATAATCATTACAAGAATATT
AGATCAGAAGTTCAATCAAGCTGGAGAAACTTCAACAGATTTAATACAAT
TCGTTTGGAGTTCAGTTTGAACGATGCTATAGACCACAAAGTCTTTGATC
TTCCAAAATCTCcagacaaagaaaaaaagaaattctcttATCTTATCACC
ATCAAATACAAAAACGTCTCAAAAACAGTCACAAAGGAGACTGATTCGTT
TTACTTGATCGGAACGGATAACAAGCGCCAAAGTTCAGtgaGTTCTGGAG
ATTCTGGAGTTGGATATTCACCGAGCGCCCCTTCATACGAAGGCAACAAC
AATggccaacaacaacaacaacaacaacaaagcaGAATATTGGACGAATA
TTCACGTATTATAACCGATCGAATTGAAACGAAGACTCTTTCACTTAATG
GTACGGAATTCGATGGAACATCATTCAAAACGGAACGCCATGACattggc
taccattttgaattagGTGATGATGATGGGAATTTCGAAGAAGGTGAAGT
AGTTGGCCTGTCCCCTATAGAAACGTACGATGCAGATGTTGATCAAAACT
CCATTCAAAAATTGGCCGTTGTCAAactgaccaatcagaatgcaAAAGAC
GCCATTTTGAAAGGTGTTGTTACGAAAGCACCATATATTGAAGCTTATTG
TCCAAAGAAAAATTCCAACAAACGAACCATTATTATTTGTATGATGGGTA
TTGTTCCAGTTCAAGTCATTGGTTCTGTGCGCACAAATGAGTTTTTATAC
GCAGCTCCGAACAACCCTGGGTTTGCAGTCGGTGATTACGACTTGGGGAC
TAAAAGCGAGAAAAACGAAGCAACTTTTATTGGTGTAGCATTCAACTCGC
GCTTGAACGGCGGTGGTAAAACTGTCGGTATAGTTGAAGCAGGGGTATCA
CTCATGCAAGCAGCTTCACAGCATTTAGTCAACGAAAAACTGAGAGACAT
GGAAACTAGTTTGGATCACAAGATTGAAAGAGTGAACAAGTCAGCAATTC
GATGGAGGAAATGTTTTTGTggatcagccattttgtttggtATTCTACTT
GGCTTATTGGGTATATTTTTATGGCAGAAATATACACCAGGTTCTGCTTA
CAAAAAATGGAAATGTAGAAAGGGCCACAAAGAACCATTTCAAACAGCTA
TAATGAATTATATTCCAAACAATTCGGATCAGCTGGTGGAGACATACGGT
ATTGAATTCACTTTAGAAGGTTTAAGGAAAAAGATTGGTCACTCAGAGTA
TAAACCTATTCCTGAAGTTGTTGATGGCATTTACGTTGGGAAAAATCCAC
ATTATATGCTCGGCTTCTACCGTTGCGCCTATGGTAATGCAATGATGTAC
GAAACAGAATCCGGTAAAAAGATCTACAGGGGACCGGAAAGTTTCGTTGT
GGACGAGAAATGTCAGCACACATTTTATCATCACGACCGTAAAAATATTT
GGGTACGATATCTCAGTGTGAATGCTATTACAGATCCCACAACACTGGTT
TGCAATCCAGCGCTGAAAAGTAACACCACTACGAGCAGGGATGAATAGAG
AATAAATAGAGACAAAACCTCATCCTTGttatatcaattttttggtGACA
GCGACTCACTATAAACAGggatgcttataagaaataaataaagaCAAACC
TATTCGTTtcattaaagggacataacagtacttgcgaaatttgtaaacaa
actgtatgcagcggatacaaaatcaaaacaaatatcacatgtcaaaataa
aaaatcaaac
Run BLAST on NCBI

transcript from alignment at scaffold_477:115637..128797+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00067880 ID=TCONS_00067880|Name=TCONS_00067880|organism=Clytia hemisphaerica|type=transcript|length=13161bp|location=Sequence derived from alignment at scaffold_477:115637..128797+ (Clytia hemisphaerica)
ataacactcATATTGCAGTATTTATACGGATtaaaataaacaattctaat
gaaattattgtttttatctttacagacaaacaaacaaatataatgaaaaa
tagaaacaaaaaatattgaaccGAATCAACGAGACACAAttagaaaagta
aaaatgtaTGAAGACAACTCACAAAGAGAGCCTTTGCTCGCCGCAGCTGG
TGGTACTGGTCAAGAAAACTTTCAgcctcaacaacaacaacaaaatggaT
TTTTTGGTGGATTCAACTTTGGTCAATACCATCAATATCCTTCCTTCCAA
ACAAATGGTTCTTTGAATTTCCCAGCTGTTCCAGGTTTGTGTTTTGTCAa
aggtttttcatattttgttaagtttgcataacttttgacatTATGGAAGC
AAATCTTCGATTTTTTAGAGGCGATACCTTACGCACGCTTTGAACGTTTG
TTTCTATAATAGCGAAAGCCTTTATACACCGAGGGAGGGGGTATTCAGTA
TTCAGTTAAATTTGTTGTCCGAGTATGTGCAATCCATAAGGGTACCAAAA
ACCATAACACACCAATTGAGTTTTTGATTGGGTCCTAAAATTAAGGGCAA
TTTTTCCGGCTCGGACGTACCCGTCACCTCACAAACCTAGTTGtcttctt
tctgaccaatcttgctccacagtgacttgctccacatccgtgtcaatgcA
ATATCAAacagcttgtaaattaaaactgacgagtaagcaaacgataaaaa
caaaatctttaaggACGTCTTTTTAGAACCCTCAAAATCGCACTGAGGGT
TGTGTAAAAGCCTATgagctttttttttattttttggcttttttaagcCT
TATAAAGTTGTTAATCTCTACGTTTCTTTTCATCATCAGGGTCAAATCTA
CCACAGTTATCAGGTGCGGATTTAGACTTTTTACCAACTGAACCGCCAGA
CTTTATCATTGACAATGCtgtttttccaaaagaaatatgCAAAAAACAGg
tacttgaaaatattttcgaaatttcttcctttgtttGTCCGTCCGTCTAT
CCATCCGTTCGTTCGTCAGTCCgcccgtccgttcgttcgttcgttcgtca
gtccgtccgtccgtccgtccgtccgtccgtccgtccgtccgtccgtccgt
ccgtccgtccgtccgtccgtccgtccgtctgtatTTATGTTTATCTAAAG
ATTATATGTCCTACAGTTACCTAGACTTCACTTAGTCATAAGCTGCACTT
CCCACTAGTAAAGCGACTTTAATTTCGACAAGTCAAGCTAAAAACTTCTC
GGTAGTTTGCTCAAACTCGTCAGATAGACAATTCTCACCGAGACAGGGGT
GAAGATgtataaatatgattttttttcaaaagataagaTTTCGAAATCTC
ATACCTTGCAATCACTTGCACCATTTCACACTATTTTAATACTGAGTTTA
TGTacgtgtgtttttctgcgacggagacggtgaggttctaatttgtctac
atcctgaccAGCCCTCAGCCCTCAACGACGGTAAATTAGCACTTTTGGTC
CTCGATATTGTGGGTCAGAACTGTGGGTTTTTCCGAATCGCTTCAGTCAG
tccgccgtcctcaaaagtgtaaATACATAAACTCCGTAATGATGCGCGTG
GTGCCACAATTTTCGTGTGTTGTACCATAATGGAAAATGGACTGAGGGAC
TGGGAACGAGCTTAAAGCATACCTGAATTCATCTTTCTTCATAGCaacga
aagaaagaaaagatgaCACAGATGGTAAAGTCGGTACAACGAATCAATTG
TGATGACATCAAGCTAAATATCATCCTTCAGACGACCACTAATTCATTAG
AATGGGTGGACAAAATTGACGTCATAGTCCATAATCATTACAAGAATATT
AGATCAGAAGTTCAATCAAGCTGGAGAAACTTCAACAGATTTAATACAGT
AAgtatttaaataaattttgtgtcGTGATTGCTACTCGAGTTCTTGTTTC
TTTCAATACCCTCGTTCAGCTCATGGAAGCAGATTTGGTTGGTCGTGGAC
CCCCGCGAAAACAGAAATACTGTCTAGAACTTACCGAGCTACAaacatgg
tcgtaatatttgagaaaaaaggcaaattcctacgaaatcttataaccaca
aacgatttggaagtgctctaaattaggttggaagggtagagttttaactc
tgagttttaacgctagggctcagaatatagcctggaagtctataaatccc
tcccgaattgaaatactggaataaatttatcaattagcccaaaagtgact
ttctcgcccgaactccacatttcgaaaaacgaggaaataagctaaattct
caatatattttcacCATGATTGTATCCACAATAAATATCGACTCTTATCT
AATCGTGCAGTCACCCAGTCCCTTGATTTTTCAATTGATAGTGCTTTCGT
AAACCTACCAGAGATTTTGCCTAAATACCCCCATCCTCAGGTAAGGTCCA
GTAGTTCAACAATGATAATGTTTTCGCCTACTATGATAAAAATCCTTTCA
ATTCCAGATTCGTTTGGAGTTCAGTTTGAACGATGCTATAGACCACAAAG
TCTTTGATCTTCCAAAATCTCcagacaaagaaaaaaagaaattctcttAT
CTTATCACCATCAAATACAAAAACGTCTCAAAAACAGTCACAAAGGAGAC
TGATTCGTTTTACTTGATCGGAACGGATAACAAGCGCCAAAGTTCAGGTA
TGCTCAGCGTGTTAGtctagaatagaccttttcataaattacgtcacgaa
catcacttgcctcgttttgaaattattgccatggtaatTATGTTCCTTGa
tacattaaatgatttttttatgaaaagaaaatagTTACAAtgaaatccgc
tgggagttaatcaccatggcaataatttcaaaacgaggcaagtaatgttc
gtgacgtaatttatgaaaagttctATTATTAACCTTCAGTCAATATTCCC
TGGAAAAACattgtttagatttttttgtaatatttttgaaataagcTCAA
CACCGGGTAGCTGTTTTCTTCATTAAAATAATCGAAGTAAGCTTTAGTCG
AGGATGAAATCCTAATACCCTTTTAAGGGTTCATCCGAGTTTTCCTTCCA
AAACATGCAGAACAATATTTCTATTGAAACTTGGCTCTGCCCCTTCTGTG
TAAGGAAAGTACTGTTTCATCCataattaaaatcatttgtcaaaacaaat
tttttaaacaatagattgaAATGATTGGCTATTTTTtcacatgtgacatt
tgttttgtttatgtatccacccccttctcacagaaccaCTGGAATCCCTT
CcgactggaaaaattggcctaaATGTCGTCCTCATTGGAAAattttactc
taatttttgtcccgctgaaaataatcagaaaagcCAATCTCCACTGCAAA
TTATTGTGCCATTTTTTCCATCCTCATTGAATTTTTCTGACTCGAAAACA
ATGAatttcaaatccccagccataagagAAAACGGGAATatcgatcccca
tcgagttttactCCACTATTTTTACCTTCACTGGCTGAAGAAAttccact
gggtctgtgagaagggggtttaTGTATCACGTTGTATGAAGTTTGTTTTC
TTTGCAACTTTACTTTTATGTCCATTTGACTTTTCACAACTTTCACCCCC
AATGCATGACATTCATGACGTAAAGTCTTCTACGGAAACGCTTCGGTTAT
TGCTAGTAGTggagaaaatttaagaaatttaagCTAgagaaaaattgatt
aaaattcgCCACTACTTACAATAACCTGGGTGTCTCTGTAGAAAACAATA
CGTAATGAATATCATGGATAAAATACCATCATCATCACACACAACAGGTA
GCACATCAAACAATGAAGAACTTGAACGCCAAATCAAACGAACAAAATCT
GACTCTTTTAATTCAGGtaccaaaaaataacaaaataaaataacaacAAA
AACATCTAATGACATCAACTAATCAttcaataacaaaaaataattactAC
TTAAATAACGACACAGAGACTACTAACAACAACGACAAAAATATTAATTC
TCCGAAATTTACACGGATCCCTCGATAAGGAAAtataagaaatttatgaa
aCGCTCCCTAAGCTTCTTTTGCCGAACCTAGGAGTCATTAGCTGTCAATG
AGGATGATTAAATTGTCCAAGTTAGGGAGAACTTCCCAAAATCTAGGTTT
AGTTTAGTGATTTAATGGAAAAAAGCTTTCTCACTTTTCAACGTTATCAT
TCATTCTCTCATTAATTTATTGACTTTTTTAATTGGCCCCTGCTTATAAT
CATATCCACTTATGTATATTAGCGGGTGAGAATATCCTTTTGCCACCGCA
CATATATTTTACTGATCCAACTAATACCAACTAATCATTATATTCATTTT
GTGTGTATTGTATTGTTCTGTTTCTTGCTTCAGTATTtgtgagaaaattt
tcttttcctcaAATTACAGACCTAtacgttgtttttttataagaacatcc
aacttttttgagttttaagcctaaaaattttcctAACAtactcttatttt
ccccattttttgcgtatttttatccattttcttaagaaatcgggtgNCAC
Gttgtttattttataagaacatccaacttttttgagttttaggcctaaaa
attttcttaacatgctcttattttccccattttttgcgtatttttatcca
ttttcttaagaaatcgggtgttttatagtccgcaaagccttaaagtgttc
ttaacatgttctaaacattttggccatctaaccttatgttcttacatagt
ttgttcttgtaaaaaaaacgtgtacacacATTGAAAATAACAAACACAGT
TCGGAAGTGacgattttttgtacaaaggtAACAAACTTTTAGGGAATTAc
ccacaaaatggcgaaaataagaacatgttaagaacattttaaggcttcaa
tctGATAAAAGCGCAGCTCGTTAAAGACGAGCACCACATCGTTCGACCCT
CATTACACTGTACTGTAACGAActacttctttttctttcagtgaGTTCTG
GAGATTCTGGAGTTGGATATTCACCGAGCGCCCCTTCATGTAAGATATAC
ATTATAACCTTAATCNATTCTGGAGTTGGATATTCACCGAGCGCCCCTTC
ATGTAAGATATACATTATAACCATAATCGCACGATGGATCTTCCTTATTA
GAAATTAACAGGTTTTCCATACTCCCTATCAAACCTACTATCTGTTTTTA
TGCCTGTATATAATTATATATAACCATACATCTGTGGAATTTATTGACTT
GCCGGTTAATTTTACAAGCACTTGCTATTCTCTCGCTTCTAAAAAGGGAC
TTAAGGCTTGGGAACACGAGCAGTTCTTTTCACGTTTGttcaatgcaaca
tgctccatcccaccaacacaggAAGTCCAAAataggtacccttaagggcg
gcacataccgtaccctcaatttgcctaagtaccccccccccccggctggc
atcaaagaatgaaaagttcattttttcttcttcattttcaaaaaatttta
aaattatttttctcaagtatatattgcagttctctgattTATTCTgaatt
taaagatcttttttacgcttataaaaaggaattttgagTCGCATTTTTAT
aggaatctttttgtttttaatggattgagatttttcttaagaaaacgGGG
TATTTAcgacctgtgtgtacaatacaatgtgtatattttgtgtaacgctt
cattcaaaatccaTAATGCTGCCGGAGccacgtttcacgcgtcttcgtcg
ttgatgttctaatattatgcgaaattatcgactttaagtcgtcttgttta
atTTTACAGACGAAGGCAACAACAATggccaacaacaacaacaacaacaa
caaagcaGAATATTGGACGAATATTCACGTATTATAACCGATCGAATTGA
AACGAAGACTCTTTCACTTAATGGTACGGAATTCGATGGAACATCATTCA
AAACGGAACGCCATGACattggctaccattttgaattagGTGATGATGAT
GGGAATTTCGAAGAAGGTATGACCACCACTGATATCTAACTAGTTGACTG
GATCGGGCTTCCCGTATAATGGAAGCGTTTTAAGGTTTAGAGCTGACaag
tccgccatcttgttttcagtTTTGGTcgttaatacaccttttcgaccgta
gccgcgcgggtatttttttgtccgctttatctcactaaaaccgtcccagt
ctttttttcgcacctataaactaaagaaaaattgtgttaaaaaagaattg
gatcgagtttaggggggtAATTAagtaattaagtggcacgcacctgacca
cgcgactacggtcgaaaaggcgCGTGTATAgcgcgattcgaatgttttga
aattgacGTTCTAGAAGTCTTAAGGtaaaatagaaaacaacatGGCAGAC
TACTCGACCTTAAAACCAGACACACTTTTCCACGGGAAATCTGTGAGCCT
ATCTATGTGTTTATATTGTATAAAActatatcttatataaaactcTAAAT
GGACCATTTGCGTCCCTAACTGAACTAAAATCCTGCGCCATCTGTAAATG
GGAGAGTAAACCTATGTGATGGTGATTTGTTTCAAGAAGACCATCATACT
CGCATCACGCTATCTCATGGAACCGAACTTGACTTCTTCTTTTTGCTGCA
TTTTGCTGTCAGTAAAGAAATTCATCAACGGGAATTAGGTTCGAGTTTGG
ATGAaacgggactttggaaatccaaaagaggtacccttaagggcggcaca
tacagtactctccatttgcctaagtacccccccccccgggaataaTTTGT
TTTTGGTTTAGAAGGAGGGTACTGGCTATGGTAAACTAGACCCGATTCCT
TTGAGGGGTTTAGGGTTGATAGATGCATTGACAGTGTTTTCTCTACTTTT
TTGCAATCAACAACAGGTGAAGTAGTTGGCCTGTCCCCTATAGAAACGTA
CGATGCAGATGTTGATCAAAACTCCATTCAAAAATTGGCCGTTGTCAAac
tgaccaatcagaatgcaAAAGACGCCATTTTGAAAGGTGTTGTTACGAAA
GCACCATATATTGAAGCTTATTGTCCAAAGAAAAATTGTAAGTACAGTGT
GTATTTTTGTCTTTTGAATGTAGATAGTCGGGCTGAAACGATATCATGCG
GGACAAGTGAGTATAGAGGTTAGGTAAGCATAGATAGACAATTTGTTGGC
AAAGGTTGAAAGCAGTGTGGCTCGACCAAAATTGGGGCAAATATAGGAAA
CAATTTTCGAAAGTTGGNCTGTCCAAAGAAGAATTGTAAGTACAGTGtgt
ttttttgtcttttgaatGTAGATAGTCGGGCTGAAACAATATCAGGCGGG
ACAAGTGAGTGTAGAGGTTAGGTAAGCATAGATAGACAATATGTTGGCAA
AGGTTGAAAGCAGTGTGGCTCGACCAAAATTGGGGCAAATAAAGGAAACA
TTTTTCTTAAGTTGGGATTTTGGCGCGCCctaaaagtaaaatatatttgT
AAAAGTAACACGAGCGAAGCGAGTATGAAAATTGTtgggtaatgtttttt
tttctgcttATTTCAAGGTGATTATTTAAAAAGCAAAGGGGCGCtgaaat
tgatcatttttgctAAAGAAATTAGAATAAAACATTGCAGTCGACCGTCT
CTAATTCGAAAGGGGaattaaatttttatcttattagggagcgtatcaaa
tagtagagcatcgtttatgagagtttcttgatGACGATGACTTgtagaat
tatcaaaaaatggagcgtatcgaattgTAGAAAGTCGAATTATAGAGTAG
AATAATAtactatttttatttcttttcaccAGCCAACAAACGAACCATTA
TTATTTGTATGATGGGTATTGTTCCAGTTCAAGTCATTGGTTCTGTGCGC
ACAAATGAGTTTTTATACGCAGCTCCGAACAACCCTGGGTTTGCAGTCGG
TGATTACGACTTGGGGACTAAAAGCGAGAAAAACGAAGCAACTTTTATTG
GTGTAGCATTCAACTCGCGCTTGAACGGCGGTGGTAAAACTGTACgtatt
tctttgtatttctaCATGCCCTCATATATTGTGgtcggttagctcagtcg
gtagtgCATTCGTCTTACAATCCataggttgtgggttcgatccccggtca
ctgCTAACTCAGCGAATATGTTGTGAGTAGATGTGACGTTCTACCTCAGC
ATTAAATGGAAAAAGTGACGAAACGAGGATAGACTCCCTTTATCCCGGCT
CCACCGACAGCCAATACAATCCTGGCCAAAAGTAAATGGAATTTCACTTA
TTCTACTGTTTTTATGGCTCCTTCTCCTCTTCCCCCTATCTACAATGTTG
TTGAGTCAAGTTGGACTGAAATTTAACATTGTATAAGGGAGTAAAGGGGG
AACTTGTAATTCATACAAATAAATGAGGAATTCCATTACTTTTGGCCAGT
ATTGTAGATGATTATACTTACTTCATTTTTGTCAGTCTCTCGAATGGTGT
GAAGCATGggcacagatttctgtaaagcccaaagggctagatgtcgtgct
tcaagatcttccaagcaaaaaaaagtgaatatcgcaaaaaatattgctgc
taatgttttcgaaaacccgcgaagcttctttTTTGGTCAAACActtaaat
tctattgtaatgtcacgtcacctaggtaggatttccttacctaacctcgg
cacacttttcagccaaagcacgatatctagtccttcgggctttataaatc
tatgagtATGGGCTGAAAAGAGGCAAAATTAGAGGATTTCGTTTTAAAAG
ATAAGAACtgaatttttccaagaaaacaaaatttcttatcACTACATCGA
GAAAAGTCAAAACGCCGTTTCACAAATGATAGCTTTTGTCTCTTATTTTT
AGGTCGGTATAGTTGAAGCAGGGGTATCACTCATGCAAGCAGCTTCACAG
CATTTAGTCAACGAAAAACTGAGAGACATGGAAACTAGTTTGGATCACAA
GATTGAAAGAGTGAACAAGTCAGCAATTCGATGGAGGAAATGTGAGTTTT
ACCAAACAACTCTATCCTTGAGTTTTTCTCTAAATGAATACACCTAAAAA
CATTTAAGAAGGTTACAatataacacccccttctcacagactcactgGGA
CCCTTTCACACTGGAAACGGTGGacaattatcctccaatttttgtcccca
ctgaaaataatgaaataaaccaatcctcactgcataATAGTATGCtaatt
ttcccatccccactgaattttctgacttgaaaacaaaagaattaaaattt
ctaGCCATGAAAAATATGGCAATTTTCGTTTCAAGTGCAAAACCTTTAGA
GTAAAGCCTAGTATATTATGTAGACTATACTTTTTAGctgttttataaaa
ttttgaataaactaCGGACGGCTCCTGGACGGCTGAAAAAAAGTAAATCA
ACGACAGCATAATATTTTCCCCTCATTCTAGCAACTACTTATAAACATTC
AGCGACGAATTTAGTACCTGAAAAGTCTCATCCAAAACTGAGACAACAAG
AAACAATATAAAATGTAATTTGGAAATCTTTctttttgccaccggaggaa
gcctaaaaGCTTCTGAAGATgccattcatagcttcacgcataaggaagtt
gggcaaacatctcacaattttgcgcgtttttcagtattttagttccgctt
aacggtagcattcttatcttacggtctctctattgtattatcatcatcaa
aaagacttttccggagttattttgatctgattactcattttgaaacgtcA
GTTTNtcaaaaagacttttccggagttattttgatctgattactcatttt
gaaacgtcagttttgtctttttcttatccctggagagttaaatgaatcta
aggaaatgcccttttctgggaaattccctttttataccacaagtagttat
taagcgctcttcacaggttaaaaatattactctactcaaagtattcgaac
agttatgttgctaaacgtgtacattagtaaaataacagtatcttcagata
tatatacgctttttataggaaaaaccagtaagtcatatgattctggctgg
gctgctcttaaatttatatgagtttttcagccttaaatgtcaatattaat
taataCGGAAAcgtgtacttctcagtaatttctgaaatctgaggttcaga
ttcttcttaatttgttcttaggttttggccaaatttcagcctcgtattct
tatgcaattgtttttataaaaaacgtgtaagacaaggcacggatgtcacc
ctaagtagactgtaaatcactcccttgacacatttggtatcatttgaaag
aattttgtctcagatgagaggtcactcttaacaaaaattactgtagggct
aagatcatttcttttgagcgcaaattcaactctatgtgttcattttgctg
cggtggcaccttaatgaaagttatggctagtttaaGGGACAGAGCCTACA
ACATTTTTAACACGGAATCGAATTTTTTCAATAGCTAATATCACATTAAA
GGTTTTACCTTTTCATAAGTTTTCCCGTTTCATACCAgaaacatatttca
tatcagggcagtgtctgccttttgttatattatgctgatataagcgagaa
aaaaaattttcttttccactttctgaccaatcttgctccacatccgtgtc
aatccaacgtgaaaaagcttgtgaattaaaattgatgggtaagcaaacga
tatcacttttatttacaaacaaaacctttaataccTTTATTCCTTTATCT
CGTAGGTTTTTGTggatcagccattttgtttggtATTCTACTTGGCTTAT
TGGGTATATTTTTATGGCAGAAATATACACCAGGTTCTGCTTACAAAAAA
TGGAAATGTAGAAAGGGCCACAAAGAACCATTTCAAACAGCTATAATGAA
TTATATTCCAAACAATTCGGATCAGGTAAGAATGCCAAATATGCCCAAGA
AAGGACATCCGTTGTATACCGTACTTATGGCTACTTTTTTAAAGTTCACT
CAATAAtcaaatgggctattccagaaaaaatctaTACCCCTTGTGTTGCg
atcatttttttaaaaggtGATTCCCCTGGAtttctttctcaatttttcag
gaccccctaGGATTATTTTCCTCCCATttctttggaccaccctggatttt
caacccgattttactgaccaccctgaattttatcattcaaaaaaccagAC
CACCCTGAACTCTTTGTTTTCCAGGTCACCCTtaacgtcacacctcctca
acatagggggtacagactatttctggaatagcccaatgaaAATAATTCCA
GTGGAAATCCAAATTACCAAATATTTTGAGAGCTGGACGTTCATAAAAAC
AAATTGATATTAACTTATTTCACTTAAGTACGACCCCCTTAACTTTACTG
CTTTGAAAGGTTGGAAACTATGAAATTGTTctattaatttcattttcacc
gtttatttttttgtaagattATGCTcctttcattttaatttactttttat
cTTTCCTCTATATTTGCtaaatgaaattactttttattcataaaaattcC
AGCTGGTGGAGACATACGGTATTGAATTCACTTTAGAAGGTTTAAGGAAA
AAGATTGGTCACTCAGAGTATAAACCTATTCCTGAAGTTGTTGATGGCAT
TTACGTTGGGAGTAAGCAgatttgttcttaaaatgttcttatttacacca
ttttgtgactatttttacccattttccttagaaattgCTTAGGGACTCGG
TGGGTATTGAACTAAGGCCATTATACCACTACGCCAGATTTCATAACTGG
TTTAAANTCCTTAGAAATTGCTTAGGGGCTCGGTGGGTATTGAACTAAGG
CCTCCCAGGCGGGAGTCGAGGATGATAACCATTATACCACTACGTCAGAT
TTCATAACTGGTTTAAAAGTGCAAAGATTTTACTCTTTTCTCAACTGTGA
CATAGACAAATTACAATCTCGAATGTCACTCCCTCCATAAGTTgataaat
taaatattttttaagctttttggcAAACTTAGAACTTATCTGAACCGTCT
AGATTAGGCTGCAAATGTTCGTCTAACTAGCTTTAAGTCCTAGGATATCT
CGCAATCCCGGACAGTTCAGTGGTATAGTGAAggttagcctggagatcca
tgctatgatttcttcttttatatactgatggtgAAATGAATGGTATGATC
TGGGCTAAGATTTTGAGCTTCCCAGAAAACAAAgctaatcaaattttgtt
attctttcactggtcacactttgttagagaaaacgcaagttccgaaattt
ggtttaatttaattttagtaagaaGCGAGGACAGTGCTAATTTCGAATTT
CTCACTGTAAATTTTTCAAGGCAGAAATCTACTTCACAGCTCGtacccgt
cctgtatatatCAGAGTATAAAAAAACAGGACGGGTTTCCTGTCTAAGTG
ATGGTCCCATTGCGCATTAAAGCTGATGAGTGTCATATTAATTCATTAAT
TTGTGGTAATTCAACGATTTTCTTTAACTCTTTTTTGTTCAGAAAATCCA
CATTATATGCTCGGCTTCTACCGTTGCGCCTATGGTAATGCAATGATGTA
CGAAACAGAATCCGGTAAAAAGATCTACAGGGGACCGGAAAGTTTCGTTG
TGGACGAGAAATGTCAGCACACATTTTATCATCACGACCGTAAAAATATT
TGGGTACGATATCTCAGTGTGAATGCTATTACAGATCCCACAACACTGGT
TTGCAATCCAGCGCTGAAAAGTAACACCACTACGAGCAGGGATGAATAGA
GAATAAATAGAGACAAAACCTCATCCTTGttatatcaattttttggtGAC
AGCGACTCACTATAAACAGggatgcttataagaaataaataaagaCAAAC
CTATTCGTTtcattaaagggacataacagtacttgcgaaatttgtaaaca
aactgtatgcagcggatacaaaatcaaaacaaatatcacatgtcaaaata
aaaaatcaaac
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_042395XLOC_042395Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00067880-exon-scaffold_477-1491911889:115637..115970TCONS_00067880-exon-scaffold_477-1491911889:115637..115970Clytia hemisphaericaexon
TCONS_00067880-exon-scaffold_477-1510915933:115637..115970TCONS_00067880-exon-scaffold_477-1510915933:115637..115970Clytia hemisphaericaexon
TCONS_00067880-exon-scaffold_477-1575043694:115637..115970TCONS_00067880-exon-scaffold_477-1575043694:115637..115970Clytia hemisphaericaexon
TCONS_00067880-exon-scaffold_477-1491911889:116526..116635TCONS_00067880-exon-scaffold_477-1491911889:116526..116635Clytia hemisphaericaexon
TCONS_00067880-exon-scaffold_477-1510915933:116526..116635TCONS_00067880-exon-scaffold_477-1510915933:116526..116635Clytia hemisphaericaexon
TCONS_00067880-exon-scaffold_477-1575043694:116526..116635TCONS_00067880-exon-scaffold_477-1575043694:116526..116635Clytia hemisphaericaexon
TCONS_00067880-exon-scaffold_477-1491911889:117381..117584TCONS_00067880-exon-scaffold_477-1491911889:117381..117584Clytia hemisphaericaexon
TCONS_00067880-exon-scaffold_477-1510915933:117381..117584TCONS_00067880-exon-scaffold_477-1510915933:117381..117584Clytia hemisphaericaexon
TCONS_00067880-exon-scaffold_477-1575043694:117381..117584TCONS_00067880-exon-scaffold_477-1575043694:117381..117584Clytia hemisphaericaexon
TCONS_00067880-exon-scaffold_477-1491911889:118194..118383TCONS_00067880-exon-scaffold_477-1491911889:118194..118383Clytia hemisphaericaexon
TCONS_00067880-exon-scaffold_477-1510915933:118194..118383TCONS_00067880-exon-scaffold_477-1510915933:118194..118383Clytia hemisphaericaexon
TCONS_00067880-exon-scaffold_477-1575043694:118194..118383TCONS_00067880-exon-scaffold_477-1575043694:118194..118383Clytia hemisphaericaexon
TCONS_00067880-exon-scaffold_477-1491911889:120728..120775TCONS_00067880-exon-scaffold_477-1491911889:120728..120775Clytia hemisphaericaexon
TCONS_00067880-exon-scaffold_477-1510915933:120728..120775TCONS_00067880-exon-scaffold_477-1510915933:120728..120775Clytia hemisphaericaexon
TCONS_00067880-exon-scaffold_477-1575043694:120728..120775TCONS_00067880-exon-scaffold_477-1575043694:120728..120775Clytia hemisphaericaexon
TCONS_00067880-exon-scaffold_477-1491911889:121546..121752TCONS_00067880-exon-scaffold_477-1491911889:121546..121752Clytia hemisphaericaexon
TCONS_00067880-exon-scaffold_477-1510915933:121546..121752TCONS_00067880-exon-scaffold_477-1510915933:121546..121752Clytia hemisphaericaexon
TCONS_00067880-exon-scaffold_477-1575043694:121546..121752TCONS_00067880-exon-scaffold_477-1575043694:121546..121752Clytia hemisphaericaexon
TCONS_00067880-exon-scaffold_477-1491911889:122653..122823TCONS_00067880-exon-scaffold_477-1491911889:122653..122823Clytia hemisphaericaexon
TCONS_00067880-exon-scaffold_477-1510915933:122653..122823TCONS_00067880-exon-scaffold_477-1510915933:122653..122823Clytia hemisphaericaexon
TCONS_00067880-exon-scaffold_477-1575043694:122653..122823TCONS_00067880-exon-scaffold_477-1575043694:122653..122823Clytia hemisphaericaexon
TCONS_00067880-exon-scaffold_477-1491911889:123569..123777TCONS_00067880-exon-scaffold_477-1491911889:123569..123777Clytia hemisphaericaexon
TCONS_00067880-exon-scaffold_477-1510915933:123569..123777TCONS_00067880-exon-scaffold_477-1510915933:123569..123777Clytia hemisphaericaexon
TCONS_00067880-exon-scaffold_477-1575043694:123569..123777TCONS_00067880-exon-scaffold_477-1575043694:123569..123777Clytia hemisphaericaexon
TCONS_00067880-exon-scaffold_477-1491911889:124639..124777TCONS_00067880-exon-scaffold_477-1491911889:124639..124777Clytia hemisphaericaexon
TCONS_00067880-exon-scaffold_477-1510915933:124639..124777TCONS_00067880-exon-scaffold_477-1510915933:124639..124777Clytia hemisphaericaexon
TCONS_00067880-exon-scaffold_477-1575043694:124639..124777TCONS_00067880-exon-scaffold_477-1575043694:124639..124777Clytia hemisphaericaexon
TCONS_00067880-exon-scaffold_477-1491911889:126542..126711TCONS_00067880-exon-scaffold_477-1491911889:126542..126711Clytia hemisphaericaexon
TCONS_00067880-exon-scaffold_477-1510915933:126542..126711TCONS_00067880-exon-scaffold_477-1510915933:126542..126711Clytia hemisphaericaexon
TCONS_00067880-exon-scaffold_477-1575043694:126542..126711TCONS_00067880-exon-scaffold_477-1575043694:126542..126711Clytia hemisphaericaexon
TCONS_00067880-exon-scaffold_477-1491911889:127339..127447TCONS_00067880-exon-scaffold_477-1491911889:127339..127447Clytia hemisphaericaexon
TCONS_00067880-exon-scaffold_477-1510915933:127339..127447TCONS_00067880-exon-scaffold_477-1510915933:127339..127447Clytia hemisphaericaexon
TCONS_00067880-exon-scaffold_477-1575043694:127339..127447TCONS_00067880-exon-scaffold_477-1575043694:127339..127447Clytia hemisphaericaexon
TCONS_00067880-exon-scaffold_477-1491911889:128329..128797TCONS_00067880-exon-scaffold_477-1491911889:128329..128797Clytia hemisphaericaexon
TCONS_00067880-exon-scaffold_477-1510915933:128329..128797TCONS_00067880-exon-scaffold_477-1510915933:128329..128797Clytia hemisphaericaexon
TCONS_00067880-exon-scaffold_477-1575043694:128329..128797TCONS_00067880-exon-scaffold_477-1575043694:128329..128797Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_477supercontigscaffold_477:115637..128797 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.303055	0.312504	2.46207e-07	0	0.868896	0.377386	1.35922	1.63115	5.37852	7.00978	6.75922	9.52034	21.6112	14.4579	16.0466	22.4031	5.17	4.95634	19.1139	17.2321	4.69182	4.40545	15.8582	16.8743	33.0281	24.8503	55.4636	63.7111	2.70969	2.87539
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00067880 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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