TCONS_00067859 (transcript) - C. hemisphaerica

Overview
NameTCONS_00067859
Unique NameTCONS_00067859
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length315

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00067859 ID=TCONS_00067859|Name=TCONS_00067859|organism=Clytia hemisphaerica|type=transcript|length=315bp
GTTGAAGCAAGATGTGACGATTTCTTGGCTCGAAGATTAACGAGAAAATT
CGGTGATGATTATCTTAAATCTGATTTCGCACCGCGTGTGACGAAACCAG
CATCAGATTATCATGAACCGTGAATCGAAACCAAGCACAGCGGTAAAGAC
GATCACCGCAGCCTCATCGATACAACCGCCACACCAACTGAAATATGATG
GCTTTTTTTGTAAGCCATGCGTCAGTCTTTTCTAGTCATAGGTGGTGGCA
TGGCAAACGTCTGAACTGAGACACCATCTTCtacgcgttttttataagaa
cactcaaaattttga
Run BLAST on NCBI

transcript from alignment at scaffold_476:382457..382771

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00067859 ID=TCONS_00067859|Name=TCONS_00067859|organism=Clytia hemisphaerica|type=transcript|length=315bp|location=Sequence derived from alignment at scaffold_476:382457..382771 (Clytia hemisphaerica)
tcaaaattttgagtgttcttataaaaaacgcgtaGAAGATGGTGTCTCAG
TTCAGACGTTTGCCATGCCACCACCTATGACTAGAAAAGACTGACGCATG
GCTTACAAAAAAAGCCATCATATTTCAGTTGGTGTGGCGGTTGTATCGAT
GAGGCTGCGGTGATCGTCTTTACCGCTGTGCTTGGTTTCGATTCACGGTT
CATGATAATCTGATGCTGGTTTCGTCACACGCGGTGCGAAATCAGATTTA
AGATAATCATCACCGAATTTTCTCGTTAATCTTCGAGCCAAGAAATCGTC
ACATCTTGCTTCAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_042384XLOC_042384Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00067859-exon-scaffold_476-1491911889:382457..382771TCONS_00067859-exon-scaffold_476-1491911889:382457..382771Clytia hemisphaericaexon
TCONS_00067859-exon-scaffold_476-1510915933:382457..382771TCONS_00067859-exon-scaffold_476-1510915933:382457..382771Clytia hemisphaericaexon
TCONS_00067859-exon-scaffold_476-1575043694:382457..382771TCONS_00067859-exon-scaffold_476-1575043694:382457..382771Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_476supercontigscaffold_476:382457..382771 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.00385	0.326305	0.757743	0	0.451251	1.06975	0	0	0.281976	0	0	0.222854	0.222544	0	0.190007	0.407813	0	0.257468	0	0.372221	0	0.473416	1.91833	3.13927	0	0	0	0.489673	0.742799	1.13519
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00067859 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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