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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00067831 ID=TCONS_00067831|Name=TCONS_00067831|organism=Clytia hemisphaerica|type=transcript|length=3181bp
TCCGTCATTATTTCCAGTACTACACGAACGCTCTCATAAGATATTTGTat
tcaaattttcttagaaatcatCAGGAAGTCACTATGGTAAAACATTTACT
TCCACTGCTCGTTCTTCTGTTCCTGGAAGTGATGCTATGTAACGGTGGAG
AtgtttttggaaatgaaattgaCCAAagtctaaagaaaaaaattatccgA
GGCCAAGGTGGTTTTGAGGTCATCGGTGTTTTCCCATTCAatgaaatcaa
caaaagaagcgaagttgatcttcaaaatGGTGTCATGCTTGCTGAAGCAA
TGAGATTCACTATCCAACAAGTCAACAAGCTTGATATACTCCACGGTTAC
AAATTCAATTTGACCAGTATGTTCAATTGTCAAACTGAATTTTGTGTCCG
TGAAAAAATTCGTGATACTTTCTTAACAAAAACTCAATTTCTGATTGGTC
CATACTCGTCCGAGACTTCTTATTATGGCTCTATTCTTACTGATACTTTC
CAACTGCCGTCGATCAGTTACAGCGCTACGTACAGCGATTTCGGACGTTA
CGGGCTTATGCAACGATACATGTACCGGACAGTTCCATCAGACGATTATC
GTATTTTGGCCGCTTTACAATTTATCCGACAATCCAACTGGACGTACGTT
GGCGTCATTAGTTCCCATGGTTACGATGGAGAACGTGACGCTATTCTGTT
TATAcggaaactttcaaaatatggtGCTTGTTTGTCGAGCCAAAGAAAAA
TTCCGAATTATGAAGACACTGAAAAACATTACGAGAATATTATCGAAGAA
ATGCTCTCAGAAACCAGGTTAAGTGTTCTTGTTTTATTTACAACCAATAA
AGATACAAGAAACATTTTCCGTGTCTTAAAAGCGAAAAAATTAGAATCTA
GATTCACAATACTGTGTATGTATGGCTGTACTAACTATTTGGATGTCGTA
AATGGAAACCAGGATATAGCAAACGGTACCTTGAGTATGTATATCCACAA
TACTGAAGTTGAAGAATTCAAGTCCTGGTTTTTACGCTTGAAACCTGAAA
ACCATCCTTTCGGAGATCTGTACTTTAACACATTTTGGGAAAACGTATTT
CACTGTCATGTTAATGAATCAGAAAATGTTAAATTGTATGACAAAAAATG
CACCATGAATGAGCAACTGGATGTCGGTCAAGGATACTACCCGTCTACCC
CTATCCATACTGTTCTCGATGCAGTTTATGGTATGGCTTTGGCAAccaaa
aatttcattgaaaacacatGTAACGAATTTGAATATCGAAAATTGGAGCT
CAACAAGAACGTATCCATTGGAACAGCGAAACGAATTTGCTATATCGGAG
CTCAAAGAATCCACAAGAATAGCAAGCACGTCAGAGATGAACTCCTCAAA
TTGGTTTACAAAGATGGCACCCTCCGTATCTCTGACCCAGGTAACCCTAA
CGACGGCAGCCGAAAATCAACCATCCAATATGATATCAGTCGCTATAGTT
ACGACCAAACAACAGGGCAGAGTAACATTGAACCAGTTTGGACATGGAAA
GTACAAAGAGATGAAAATACAACGTCAGCTGAAGTTGAGAAgaaattttt
agcaaaatctgAATGGTTTATGAGGCGCCATTCTGCTCAAAATTTTGGTG
TTTGTAGTATGCCGTGCGGAATCGGTCAATATATGGAGCATGATCAAAAT
TACGTTAGAGCTAAATGTTGTTGGACTTGCCGTAAATGTCCCACAGATCA
CATTGTTGTCAACAACACTTGTATCGAATGTAAGAATACGGAATTTCCCG
ATGAACAGCATACCCGGTGTTTATCCTTACCGATCAAAGCCATCACTTGG
GGATCGAATGTGATTTcgatcatttttgttttgttttcagtggTAGGCTT
ATTCCTAACCATCTGTGTGGCGCTGATATTCTCGAAAAACAATGATAACA
GAATTGTCAGAGCATCTGGTCGTGATCTCTGCTACACAATTATGTTTGGT
ATATGTATGATTTTTGTATGTCCGTTTCTCTTTCTCACGGAAACTAATAA
AGCTTCTTGTATCATACGTGGCGCTTTACCTGGATTCGCATTTCTGACGT
GTTACgctcctttgtttttaaaaacaaaccgtATCTATCGGATCTTTTTC
AGCGCACGTGTTTCCGTATCTCGACCATCATTGGTTAGTTCCCAGTCCCA
GTTCGCAGCTTTGTTCGGTGTTTTAGCTGTCCAGATTATCTTGAGTATCG
TTTGGTTCACGTCACAGATTCCTATCCCCGAATCGCAGGTTTCAAAATCC
GGAAATTACGTCACCATTCATTGTAGCTCTGATTCCAATCCAGTTCTCAT
GATCCTGAACCTCTCATTAAGCGTCTTGTTCATGATCTGCTGCACCGTGT
TAGCCTTCAAGACGCGACGTTTCCCGAAGAATTACAACGAGGCTAAATAC
ATTGGTCTCACTTTGTACATAACCTGCGTCGTATGGTCACTTTTCCTACC
AATCTTCTTTCTAACGCGTTCGGTCGATTATGATTTCCTTCGTGAATACC
TAATGTGTATCGTATGTATTTTGATCGGTTTTGTCACGCTTTTCGGAATG
TTTGGACCAAAGATCATTATGATATATCATGCGCCGCCACAGGGATCGAG
CCAAGGAAGCCTCCCGACATGGTATATAACAAATTCAAGAGACGAAACAG
AACATGACCGTGAAAATACCGCTTTCACAACCATAACACCTGAGCGATCT
TAATGATATCACATATCACCATAAGATGGGGCTTGGTGTAAAGACAATGA
AACAATGACACTAATCATTATTCCCTTGGCAACATTTTGTGTACGTCCAT
TTAACATTACCATGTGGTCGTTGAGTTGATGTGTTATGCAGGCAGGGATA
GCTCTGAGTATtctgtaaaacattttcaagcgTTACAGTGGCATGTCCAA
AGTAAAAGTGAAGCAGTTCCATTCACTTTCGGATTATCAAACATAACCGT
GAAAGAAGCGCCTTAAAATGTAGATCAACTTGATAGCTGTATGaagttta
tgacgtcataaacatcaCGTAACATTACAtaataaaactcaaaatataTT
AGTTATGAATAAAGTACATAAATTACccgaaaaattagaaaatggcAAGG
CCAAGACCTGTGAAAGAAACTCAAAATTGGT Run BLAST on NCBI protein sequence of TCONS_00067831-protein >TCONS_00067831-protein ID=TCONS_00067831-protein|Name=TCONS_00067831-protein|organism=Clytia hemisphaerica|type=polypeptide|length=916bp
RHYFQYYTNALIRYLYSNFLRNHQEVTMVKHLLPLLVLLFLEVMLCNGGD
VFGNEIDQSLKKKIIRGQGGFEVIGVFPFNEINKRSEVDLQNGVMLAEAM
RFTIQQVNKLDILHGYKFNLTSMFNCQTEFCVREKIRDTFLTKTQFLIGP
YSSETSYYGSILTDTFQLPSISYSATYSDFGRYGLMQRYMYRTVPSDDYR
ILAALQFIRQSNWTYVGVISSHGYDGERDAILFIRKLSKYGACLSSQRKI
PNYEDTEKHYENIIEEMLSETRLSVLVLFTTNKDTRNIFRVLKAKKLESR
FTILCMYGCTNYLDVVNGNQDIANGTLSMYIHNTEVEEFKSWFLRLKPEN
HPFGDLYFNTFWENVFHCHVNESENVKLYDKKCTMNEQLDVGQGYYPSTP
IHTVLDAVYGMALATKNFIENTCNEFEYRKLELNKNVSIGTAKRICYIGA
QRIHKNSKHVRDELLKLVYKDGTLRISDPGNPNDGSRKSTIQYDISRYSY
DQTTGQSNIEPVWTWKVQRDENTTSAEVEKKFLAKSEWFMRRHSAQNFGV
CSMPCGIGQYMEHDQNYVRAKCCWTCRKCPTDHIVVNNTCIECKNTEFPD
EQHTRCLSLPIKAITWGSNVISIIFVLFSVVGLFLTICVALIFSKNNDNR
IVRASGRDLCYTIMFGICMIFVCPFLFLTETNKASCIIRGALPGFAFLTC
YAPLFLKTNRIYRIFFSARVSVSRPSLVSSQSQFAALFGVLAVQIILSIV
WFTSQIPIPESQVSKSGNYVTIHCSSDSNPVLMILNLSLSVLFMICCTVL
AFKTRRFPKNYNEAKYIGLTLYITCVVWSLFLPIFFLTRSVDYDFLREYL
MCIVCILIGFVTLFGMFGPKIIMIYHAPPQGSSQGSLPTWYITNSRDETE
HDRENTAFTTITPERS Run BLAST on NCBI transcript from alignment at scaffold_476:156285..162358- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00067831 ID=TCONS_00067831|Name=TCONS_00067831|organism=Clytia hemisphaerica|type=transcript|length=6074bp|location=Sequence derived from alignment at scaffold_476:156285..162358- (Clytia hemisphaerica)
TCCGTCATTATTTCCAGTACTACACGAACGCTCTCATAAGATATTTGTAT
TCAAATTTTCTTAGAAATCATCAGGAAGTCACTATGGTAAAACATTTACT
TCCACTGCTCGTTCTTCTGTTCCTGGAAGTGATGCTATGTAACGGTGGAG
ATGTTTTTGGAAATGAAATTGACCAAAGTCTAAAGAAAAAAATTATCCGA
GGTAAATACTAAAGGCCGGTCTCCACTTGCGCGCGCTGCGATCGCACTTT
TTGGCTTCAATCCTTTTTGCTTGGAAAAAAGATTACGTCATAAAAATGTA
GCACGTGCTCTAAAGAAAAGTTGAACACATTTCAACTTTTTTCAACCGCT
ACGTCAGGTCGTGCCAATGGAGTTGCTTAATTTTTCTTTTGACCAATAGC
GTGGAAAGCTTTGCTCGAAAAAGTGCGATCGAAGCGCGTGCAAGTGGAGA
CGGCCTTAAAACCACCATAAACGCGCTTGGGGCCCGAAATCTCTGATCAT
GGATGGGTTGTATTATCGAGGGGATATTTAACCTGGGTAACCTGAAAAGG
TTATATTTCCTGAAAAGGTCTAGATATCCAATGATTGTAATAGCCTCTAG
TCATTCAAATTTTTAATTCAAATTTAATGAAATGTGAAAGATCGCTCATA
TAAAACTTTATTGATAAAATTTCGTTTATAAACAATACACTATATAATAT
GAAAGAATTTTAGATGGGACGTTAAACCTTACCATTTCTATGAACGGAAT
GCTATTGGCTTATAACTTGAATAGTTGTGGGAAATTCCAAAATGAAGTTT
CCAGGAAAAAACTGTATACTTCCGTCCATTTTCCAAGACCATTCCTTTCC
CTGGATTTCTACACTTTCTCTTGGTCGGTCTCTTTAGTTGCTAGGTACCA
AGCAAAGAGGCGTTAAGTACCCATTATGAGTCTTTGGTATAACACTCGCC
GGTTCGGCGTCGAACCCACAACCTTGAGCTGTAAACATGCGTTTTTATAA
GCATTGGACTTATAAGCAAAGCAAAGCTCAGATATATGGCAAATATTTAA
GAATATTCTAAGAATTACCCTGAGACTGCGAAAAATGTATCTTCCTGATT
TTAGTTGTTTTTGGTTGAGGTTTTACGGATTTTCGAAATTTCCTTAAAAT
TTTGTTTAGAATAGAATCATCCATCAAGGAGTTCTCAGTCTTGTCAATTT
CTTGATCTAAGCATTGCTGAGCCAGTTTATGGATTTTTGGATGTTTAATA
TTTAAAAAGAACATGTACTCTATCTTCATGCTCGGGCCCCTCACTCACAA
ACAGATGGCATACTTGCTTACTATTTCTTTCTCCTTTGTCCCCCAAAGAT
TTATATTTTTTTTCTGTTAACAGGCCAAGGTGGTTTTGAGGTCATCGGTG
TTTTCCCATTCAATGAAATCAACAAAAGAAGCGAAGTTGATCTTCAAAAT
GGTGTCATGCTTGCTGAAGCAATGAGATTCACTATCCAACAAGTCAACAA
GCTTGATATACTCCACGGTTACAAATTCAATTTGACCAGTATGTTCAATT
GTCAAACTGAATTTTGTGTCCGTGAAAAAATTCGTGATACTTTCTTAACA
AAAACTCAATTTCTGATTGGTCCATACTCGTCCGAGACTTCTTATTATGG
CTCTATTCTTACTGATACTTTCCAACTGCCGTCGATCAGTTACAGCGCTA
CGTACAGCGATTTCGGACGTTACGGGCTTATGCAACGATACATGTACCGG
ACAGTTCCATCAGACGATTATCGTATTTTGGCCGCTTTACAATTTATCCG
ACAATCCAACTGGACGTACGTTGGCGTCATTAGTTCCCATGGTTACGATG
GAGAACGTGACGCTATTCTGTTTATACGGAAACTTTCAAAATATGGTGCT
TGTTTGTCGAGCCAAAGAAAAATTCCGAATTATGAAGACACTGAAAAACA
TTACGAGAATATTATCGAAGAAATGCTCTCAGAAACCAGGTTAAGTGTTC
TTGTTTTATTTACAACCAATAAAGATACAAGAAACATTTTCCGTGTCTTA
AAAGCGAAAAAATTAGAATCTAGATTCACAATACTGTGTATGTATGGCTG
TACTAACTATTTGGATGTCGTAAATGGAAACCAGGATATAGCAAACGGTA
CCTTGAGTATGTATATCCACAATACTGAAGTTGAAGAATTCAAGTCCTGG
TTTTTACGCTTGAAACCTGAAAACCATCCTTTCGGAGATCTGTACTTTAA
CACATTTTGGGAAAACGTATTTCACTGTCATGTTAATGAATCAGAAAATG
TTAAATTGTATGACAAAAAATGCACCATGAATGAGCAACTGGATGTCGGT
CAAGGATACTACCCGTCTACCCCTATCCATACTGTTCTCGATGCAGTTTA
TGGTATGGCTTTGGCAACCAAAAATTTCATTGAAAACACATGTAACGAAT
TTGAATATCGAAAATTGGAGCTCAACAAGAACGTATCCATTGGAACAGCG
AAACGAATTTGCTATATCGGGTATGTATTGCCATAGTCCATATAAGAAAC
CCTGGTCTGGAAGCCTTTTGTTCCGTTCCATTATTGGACCTACCTGGAGG
TCCTATAAATTAACCTGTGTTCGTCCGTCCGTCCGTCCGTCCGTCTGTTA
CCAACTTTTCTCGGGATTGAATCATAGGAANNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNTTTTTTTGGGCAAATTTAGGCCAAAAAACGGCTAAAAAACGGG
GTTTTTTGGACTTTGTGAAAAATTGGATCATTAATTTTTTCTGATTTTTT
GCATGAAAGTAGGATTCCATCATAGGTAAAAGATGGCCGAAGCAGATTTT
TGCAAAAAAATTTTGTTGGCTCAAAAAACGCATGTTTATCTATAAGAATC
ACTTGTAATAAGCATACATCAATGTTCTTAGTCAAATTACTCAATTTTCT
TATGAGATAGATGGTTTTTTTTGCTCATGAGGGCTTACTTTTGAAGAATA
TGTGTTTAGACATGAAATTTAGGTTGCTTGGCGTGTTTTCATTAAAAAAC
TGGCCAGATTCGATATTTTTTTATAAGCACATTATCAATTACTTAGGTAT
TAGCTGTTCTCGAGATTGGCTCTTTCATTCTTTATGATTTATTGCACAAA
CATGCATAACTATAAACCCTCAAATGTAACGGAGCTCGATTTTTGGAAAA
ACATTTTTGGGGTAAATTTCAGCTAAAAAACAGCCTAAAAAAGAGTTTTT
CACAAAGTCTTGAATATGAAAGAATATTTCAAGTGCATGAAATTTTGGTT
TCTAAACGTTTTTTTATAAGAAACAAACGACTAATTTTGATAGATCGTCA
CTATTTGTGCTCTGAATGATTGTTTAATGGTCACGTCACGTAGATATCAA
TTATAAATGTGTTAAATACATAACAAGGTAGGTCCATAAAAGTATCACTT
GTTTTTTAATTGCACTTGCGTTGAGAAATTAGTTTGTTTTGCTCAATTTT
TGATCGTGTGATTAAATCTTAAACCAATCCCAAGGAGAGTACTTGGTAAC
GTGATCAAAAACTGACCAAACCGATTTTCATCTTTTGATAATAACAAAGG
AAAAAGCTAACAAAAAGTTAAAACAATAAGCTTCCAGACCAGTGTTTTTT
ATAAGGACATTGCAAAGGTTCAGTTATTCATCAAATAAATAATCTAGGCG
ATCTGTGGTACATATAACCTCTAAAATGTAACTTTTGGAAAGAGGTGGTC
ATTAAGTAACTAGAAGTAGACCAGCTAAAATAAACTCAAATTCATGAGTA
GAAAATGAGGTCCTTTATTGATAATGATACTGATGAGTTTCAGCCCTGGT
CATGGCTTTTGAAAAAGAGACAATAAAAACCCAGCCAAGCCCAGGGCTAA
TCTCCTCATAAATAAAAACAGAGATTAGGATTAAATCACGAAAATGTACA
TAATGTATTATGTGATAATTCAATAGAACTAGAACTAGATTAGACACGGG
GAAGAGTTTGAGTGATACCAGCAAATTTAAGTACCCACTTGAAATCAAGC
CTTATTCATAAAATAATCTTTTTTATTTTTTCTATTCAAAGAGCTCAAAG
AATCCACAAGAATAGCAAGCACGTCAGAGATGAACTCCTCAAATTGGTTT
ACAAAGATGGCACCCTCCGTATCTCTGACCCAGGTAACCCTAACGACGGC
AGCCGAAAATCAACCATCCAATATGATATCAGTCGCTATAGTTACGACCA
AACAACAGGGCAGAGTAACATTGAACCAGTTTGGACATGGAAAGTACAAA
GAGATGAAAATACAACGTCAGCTGAAGTTGAGAAGAAATTTTTAGCAAAA
TCTGAATGGTTTATGAGGCGCCATTCTGCTCAAAATTTTGGTGTTTGTAG
TATGCCGTGCGGAATCGGTCAATATATGGAGCATGATCAAAATTACGTTA
GAGCTAAATGTTGTTGGACTTGCCGTAAATGTCCCACAGATCACATTGTT
GTCAACAACACTTGTATCGAATGTAAGAATACGGAATTTCCCGATGAACA
GCATACCCGGTGTTTATCCTTACCGATCAAAGCCATCACTTGGGGATCGA
ATGTGATTTCGATCATTTTTGTTTTGTTTTCAGTGGTAGGCTTATTCCTA
ACCATCTGTGTGGCGCTGATATTCTCGAAAAACAATGATAACAGAATTGT
CAGAGCATCTGGTCGTGATCTCTGCTACACAATTATGTTTGGTATATGTA
TGATTTTTGTATGTCCGTTTCTCTTTCTCACGGAAACTAATAAAGCTTCT
TGTATCATACGTGGCGCTTTACCTGGATTCGCATTTCTGACGTGTTACGC
TCCTTTGTTTTTAAAAACAAACCGTATCTATCGGATCTTTTTCAGCGCAC
GTGTTTCCGTATCTCGACCATCATTGGTTAGTTCCCAGTCCCAGTTCGCA
GCTTTGTTCGGTGTTTTAGCTGTCCAGATTATCTTGAGTATCGTTTGGTT
CACGTCACAGATTCCTATCCCCGAATCGCAGGTTTCAAAATCCGGAAATT
ACGTCACCATTCATTGTAGCTCTGATTCCAATCCAGTTCTCATGATCCTG
AACCTCTCATTAAGCGTCTTGTTCATGATCTGCTGCACCGTGTTAGCCTT
CAAGACGCGACGTTTCCCGAAGAATTACAACGAGGCTAAATACATTGGTC
TCACTTTGTACATAACCTGCGTCGTATGGTCACTTTTCCTACCAATCTTC
TTTCTAACGCGTTCGGTCGATTATGATTTCCTTCGTGAATACCTAATGTG
TATCGTATGTATTTTGATCGGTTTTGTCACGCTTTTCGGAATGTTTGGAC
CAAAGATCATTATGATATATCATGCGCCGCCACAGGGATCGAGCCAAGGA
AGCCTCCCGACATGGTATATAACAAATTCAAGAGACGAAACAGAACATGA
CCGTGAAAATACCGCTTTCACAACCATAACACCTGAGCGATCTTAATGAT
ATCACATATCACCATAAGATGGGGCTTGGTGTAAAGACAATGAAACAATG
ACACTAATCATTATTCCCTTGGCAACATTTTGTGTACGTCCATTTAACAT
TACCATGTGGTCGTTGAGTTGATGTGTTATGCAGGCAGGGATAGCTCTGA
GTATTCTGTAAAACATTTTCAAGCGTTACAGTGGCATGTCCAAAGTAAAA
GTGAAGCAGTTCCATTCACTTTCGGATTATCAAACATAACCGTGAAAGAA
GCGCCTTAAAATGTAGATCAACTTGATAGCTGTATGAAGTTTATGACGTC
ATAAACATCACGTAACATTACATAATAAAACTCAAAATATATTAGTTATG
AATAAAGTACATAAATTACCCGAAAAATTAGAAAATGGCAAGGCCAAGAC
CTGTGAAAGAAACTCAAAATTGGT Coding sequence (CDS) from alignment at scaffold_476:156285..162358- >TCONS_00067831 ID=TCONS_00067831|Name=TCONS_00067831|organism=Clytia hemisphaerica|type=CDS|length=8253bp|location=Sequence derived from alignment at scaffold_476:156285..162358- (Clytia hemisphaerica)
AGCTCAAAGAATCCACAAGAATAGCAAGCACGTCAGAGATGAACTCCTCA
AATTGGTTTACAAAGATGGCACCCTCCGTATCTCTGACCCAGGTAACCCT
AACGACGGCAGCCGAAAATCAACCATCCAATATGATATCAGTCGCTATAG
TTACGACCAAACAACAGGGCAGAGTAACATTGAACCAGTTTGGACATGGA
AAGTACAAAGAGATGAAAATACAACGTCAGCTGAAGTTGAGAAGAAATTT
TTAGCAAAATCTGAATGGTTTATGAGGCGCCATTCTGCTCAAAATTTTGG
TGTTTGTAGTATGCCGTGCGGAATCGGTCAATATATGGAGCATGATCAAA
ATTACGTTAGAGCTAAATGTTGTTGGACTTGCCGTAAATGTCCCACAGAT
CACATTGTTGTCAACAACACTTGTATCGAATGTAAGAATACGGAATTTCC
CGATGAACAGCATACCCGGTGTTTATCCTTACCGATCAAAGCCATCACTT
GGGGATCGAATGTGATTTCGATCATTTTTGTTTTGTTTTCAGTGGTAGGC
TTATTCCTAACCATCTGTGTGGCGCTGATATTCTCGAAAAACAATGATAA
CAGAATTGTCAGAGCATCTGGTCGTGATCTCTGCTACACAATTATGTTTG
GTATATGTATGATTTTTGTATGTCCGTTTCTCTTTCTCACGGAAACTAAT
AAAGCTTCTTGTATCATACGTGGCGCTTTACCTGGATTCGCATTTCTGAC
GTGTTACGCTCCTTTGTTTTTAAAAACAAACCGTATCTATCGGATCTTTT
TCAGCGCACGTGTTTCCGTATCTCGACCATCATTGGTTAGTTCCCAGTCC
CAGTTCGCAGCTTTGTTCGGTGTTTTAGCTGTCCAGATTATCTTGAGTAT
CGTTTGGTTCACGTCACAGATTCCTATCCCCGAATCGCAGGTTTCAAAAT
CCGGAAATTACGTCACCATTCATTGTAGCTCTGATTCCAATCCAGTTCTC
ATGATCCTGAACCTCTCATTAAGCGTCTTGTTCATGATCTGCTGCACCGT
GTTAGCCTTCAAGACGCGACGTTTCCCGAAGAATTACAACGAGGCTAAAT
ACATTGGTCTCACTTTGTACATAACCTGCGTCGTATGGTCACTTTTCCTA
CCAATCTTCTTTCTAACGCGTTCGGTCGATTATGATTTCCTTCGTGAATA
CCTAATGTGTATCGTATGTATTTTGATCGGTTTTGTCACGCTTTTCGGAA
TGTTTGGACCAAAGATCATTATGATATATCATGCGCCGCCACAGGGATCG
AGCCAAGGAAGCCTCCCGACATGGTATATAACAAATTCAAGAGACGAAAC
AGAACATGACCGTGAAAATACCGCTTTCACAACCATAACACCTGAGCGAT
CTTAAGCCAAGGTGGTTTTGAGGTCATCGGTGTTTTCCCATTCAATGAAA
TCAACAAAAGAAGCGAAGTTGATCTTCAAAATGGTGTCATGCTTGCTGAA
GCAATGAGATTCACTATCCAACAAGTCAACAAGCTTGATATACTCCACGG
TTACAAATTCAATTTGACCAGTATGTTCAATTGTCAAACTGAATTTTGTG
TCCGTGAAAAAATTCGTGATACTTTCTTAACAAAAACTCAATTTCTGATT
GGTCCATACTCGTCCGAGACTTCTTATTATGGCTCTATTCTTACTGATAC
TTTCCAACTGCCGTCGATCAGTTACAGCGCTACGTACAGCGATTTCGGAC
GTTACGGGCTTATGCAACGATACATGTACCGGACAGTTCCATCAGACGAT
TATCGTATTTTGGCCGCTTTACAATTTATCCGACAATCCAACTGGACGTA
CGTTGGCGTCATTAGTTCCCATGGTTACGATGGAGAACGTGACGCTATTC
TGTTTATACGGAAACTTTCAAAATATGGTGCTTGTTTGTCGAGCCAAAGA
AAAATTCCGAATTATGAAGACACTGAAAAACATTACGAGAATATTATCGA
AGAAATGCTCTCAGAAACCAGGTTAAGTGTTCTTGTTTTATTTACAACCA
ATAAAGATACAAGAAACATTTTCCGTGTCTTAAAAGCGAAAAAATTAGAA
TCTAGATTCACAATACTGTGTATGTATGGCTGTACTAACTATTTGGATGT
CGTAAATGGAAACCAGGATATAGCAAACGGTACCTTGAGTATGTATATCC
ACAATACTGAAGTTGAAGAATTCAAGTCCTGGTTTTTACGCTTGAAACCT
GAAAACCATCCTTTCGGAGATCTGTACTTTAACACATTTTGGGAAAACGT
ATTTCACTGTCATGTTAATGAATCAGAAAATGTTAAATTGTATGACAAAA
AATGCACCATGAATGAGCAACTGGATGTCGGTCAAGGATACTACCCGTCT
ACCCCTATCCATACTGTTCTCGATGCAGTTTATGGTATGGCTTTGGCAAC
CAAAAATTTCATTGAAAACACATGTAACGAATTTGAATATCGAAAATTGG
AGCTCAACAAGAACGTATCCATTGGAACAGCGAAACGAATTTGCTATATC
GGCGTCATTATTTCCAGTACTACACGAACGCTCTCATAAGATATTTGTAT
TCAAATTTTCTTAGAAATCATCAGGAAGTCACTATGGTAAAACATTTACT
TCCACTGCTCGTTCTTCTGTTCCTGGAAGTGATGCTATGTAACGGTGGAG
ATGTTTTTGGAAATGAAATTGACCAAAGTCTAAAGAAAAAAATTATCCGA
GAGCTCAAAGAATCCACAAGAATAGCAAGCACGTCAGAGATGAACTCCTC
AAATTGGTTTACAAAGATGGCACCCTCCGTATCTCTGACCCAGGTAACCC
TAACGACGGCAGCCGAAAATCAACCATCCAATATGATATCAGTCGCTATA
GTTACGACCAAACAACAGGGCAGAGTAACATTGAACCAGTTTGGACATGG
AAAGTACAAAGAGATGAAAATACAACGTCAGCTGAAGTTGAGAAGAAATT
TTTAGCAAAATCTGAATGGTTTATGAGGCGCCATTCTGCTCAAAATTTTG
GTGTTTGTAGTATGCCGTGCGGAATCGGTCAATATATGGAGCATGATCAA
AATTACGTTAGAGCTAAATGTTGTTGGACTTGCCGTAAATGTCCCACAGA
TCACATTGTTGTCAACAACACTTGTATCGAATGTAAGAATACGGAATTTC
CCGATGAACAGCATACCCGGTGTTTATCCTTACCGATCAAAGCCATCACT
TGGGGATCGAATGTGATTTCGATCATTTTTGTTTTGTTTTCAGTGGTAGG
CTTATTCCTAACCATCTGTGTGGCGCTGATATTCTCGAAAAACAATGATA
ACAGAATTGTCAGAGCATCTGGTCGTGATCTCTGCTACACAATTATGTTT
GGTATATGTATGATTTTTGTATGTCCGTTTCTCTTTCTCACGGAAACTAA
TAAAGCTTCTTGTATCATACGTGGCGCTTTACCTGGATTCGCATTTCTGA
CGTGTTACGCTCCTTTGTTTTTAAAAACAAACCGTATCTATCGGATCTTT
TTCAGCGCACGTGTTTCCGTATCTCGACCATCATTGGTTAGTTCCCAGTC
CCAGTTCGCAGCTTTGTTCGGTGTTTTAGCTGTCCAGATTATCTTGAGTA
TCGTTTGGTTCACGTCACAGATTCCTATCCCCGAATCGCAGGTTTCAAAA
TCCGGAAATTACGTCACCATTCATTGTAGCTCTGATTCCAATCCAGTTCT
CATGATCCTGAACCTCTCATTAAGCGTCTTGTTCATGATCTGCTGCACCG
TGTTAGCCTTCAAGACGCGACGTTTCCCGAAGAATTACAACGAGGCTAAA
TACATTGGTCTCACTTTGTACATAACCTGCGTCGTATGGTCACTTTTCCT
ACCAATCTTCTTTCTAACGCGTTCGGTCGATTATGATTTCCTTCGTGAAT
ACCTAATGTGTATCGTATGTATTTTGATCGGTTTTGTCACGCTTTTCGGA
ATGTTTGGACCAAAGATCATTATGATATATCATGCGCCGCCACAGGGATC
GAGCCAAGGAAGCCTCCCGACATGGTATATAACAAATTCAAGAGACGAAA
CAGAACATGACCGTGAAAATACCGCTTTCACAACCATAACACCTGAGCGA
TCTTAAGCCAAGGTGGTTTTGAGGTCATCGGTGTTTTCCCATTCAATGAA
ATCAACAAAAGAAGCGAAGTTGATCTTCAAAATGGTGTCATGCTTGCTGA
AGCAATGAGATTCACTATCCAACAAGTCAACAAGCTTGATATACTCCACG
GTTACAAATTCAATTTGACCAGTATGTTCAATTGTCAAACTGAATTTTGT
GTCCGTGAAAAAATTCGTGATACTTTCTTAACAAAAACTCAATTTCTGAT
TGGTCCATACTCGTCCGAGACTTCTTATTATGGCTCTATTCTTACTGATA
CTTTCCAACTGCCGTCGATCAGTTACAGCGCTACGTACAGCGATTTCGGA
CGTTACGGGCTTATGCAACGATACATGTACCGGACAGTTCCATCAGACGA
TTATCGTATTTTGGCCGCTTTACAATTTATCCGACAATCCAACTGGACGT
ACGTTGGCGTCATTAGTTCCCATGGTTACGATGGAGAACGTGACGCTATT
CTGTTTATACGGAAACTTTCAAAATATGGTGCTTGTTTGTCGAGCCAAAG
AAAAATTCCGAATTATGAAGACACTGAAAAACATTACGAGAATATTATCG
AAGAAATGCTCTCAGAAACCAGGTTAAGTGTTCTTGTTTTATTTACAACC
AATAAAGATACAAGAAACATTTTCCGTGTCTTAAAAGCGAAAAAATTAGA
ATCTAGATTCACAATACTGTGTATGTATGGCTGTACTAACTATTTGGATG
TCGTAAATGGAAACCAGGATATAGCAAACGGTACCTTGAGTATGTATATC
CACAATACTGAAGTTGAAGAATTCAAGTCCTGGTTTTTACGCTTGAAACC
TGAAAACCATCCTTTCGGAGATCTGTACTTTAACACATTTTGGGAAAACG
TATTTCACTGTCATGTTAATGAATCAGAAAATGTTAAATTGTATGACAAA
AAATGCACCATGAATGAGCAACTGGATGTCGGTCAAGGATACTACCCGTC
TACCCCTATCCATACTGTTCTCGATGCAGTTTATGGTATGGCTTTGGCAA
CCAAAAATTTCATTGAAAACACATGTAACGAATTTGAATATCGAAAATTG
GAGCTCAACAAGAACGTATCCATTGGAACAGCGAAACGAATTTGCTATAT
CGGCGTCATTATTTCCAGTACTACACGAACGCTCTCATAAGATATTTGTA
TTCAAATTTTCTTAGAAATCATCAGGAAGTCACTATGGTAAAACATTTAC
TTCCACTGCTCGTTCTTCTGTTCCTGGAAGTGATGCTATGTAACGGTGGA
GATGTTTTTGGAAATGAAATTGACCAAAGTCTAAAGAAAAAAATTATCCG
AGAGCTCAAAGAATCCACAAGAATAGCAAGCACGTCAGAGATGAACTCCT
CAAATTGGTTTACAAAGATGGCACCCTCCGTATCTCTGACCCAGGTAACC
CTAACGACGGCAGCCGAAAATCAACCATCCAATATGATATCAGTCGCTAT
AGTTACGACCAAACAACAGGGCAGAGTAACATTGAACCAGTTTGGACATG
GAAAGTACAAAGAGATGAAAATACAACGTCAGCTGAAGTTGAGAAGAAAT
TTTTAGCAAAATCTGAATGGTTTATGAGGCGCCATTCTGCTCAAAATTTT
GGTGTTTGTAGTATGCCGTGCGGAATCGGTCAATATATGGAGCATGATCA
AAATTACGTTAGAGCTAAATGTTGTTGGACTTGCCGTAAATGTCCCACAG
ATCACATTGTTGTCAACAACACTTGTATCGAATGTAAGAATACGGAATTT
CCCGATGAACAGCATACCCGGTGTTTATCCTTACCGATCAAAGCCATCAC
TTGGGGATCGAATGTGATTTCGATCATTTTTGTTTTGTTTTCAGTGGTAG
GCTTATTCCTAACCATCTGTGTGGCGCTGATATTCTCGAAAAACAATGAT
AACAGAATTGTCAGAGCATCTGGTCGTGATCTCTGCTACACAATTATGTT
TGGTATATGTATGATTTTTGTATGTCCGTTTCTCTTTCTCACGGAAACTA
ATAAAGCTTCTTGTATCATACGTGGCGCTTTACCTGGATTCGCATTTCTG
ACGTGTTACGCTCCTTTGTTTTTAAAAACAAACCGTATCTATCGGATCTT
TTTCAGCGCACGTGTTTCCGTATCTCGACCATCATTGGTTAGTTCCCAGT
CCCAGTTCGCAGCTTTGTTCGGTGTTTTAGCTGTCCAGATTATCTTGAGT
ATCGTTTGGTTCACGTCACAGATTCCTATCCCCGAATCGCAGGTTTCAAA
ATCCGGAAATTACGTCACCATTCATTGTAGCTCTGATTCCAATCCAGTTC
TCATGATCCTGAACCTCTCATTAAGCGTCTTGTTCATGATCTGCTGCACC
GTGTTAGCCTTCAAGACGCGACGTTTCCCGAAGAATTACAACGAGGCTAA
ATACATTGGTCTCACTTTGTACATAACCTGCGTCGTATGGTCACTTTTCC
TACCAATCTTCTTTCTAACGCGTTCGGTCGATTATGATTTCCTTCGTGAA
TACCTAATGTGTATCGTATGTATTTTGATCGGTTTTGTCACGCTTTTCGG
AATGTTTGGACCAAAGATCATTATGATATATCATGCGCCGCCACAGGGAT
CGAGCCAAGGAAGCCTCCCGACATGGTATATAACAAATTCAAGAGACGAA
ACAGAACATGACCGTGAAAATACCGCTTTCACAACCATAACACCTGAGCG
ATCTTAAGCCAAGGTGGTTTTGAGGTCATCGGTGTTTTCCCATTCAATGA
AATCAACAAAAGAAGCGAAGTTGATCTTCAAAATGGTGTCATGCTTGCTG
AAGCAATGAGATTCACTATCCAACAAGTCAACAAGCTTGATATACTCCAC
GGTTACAAATTCAATTTGACCAGTATGTTCAATTGTCAAACTGAATTTTG
TGTCCGTGAAAAAATTCGTGATACTTTCTTAACAAAAACTCAATTTCTGA
TTGGTCCATACTCGTCCGAGACTTCTTATTATGGCTCTATTCTTACTGAT
ACTTTCCAACTGCCGTCGATCAGTTACAGCGCTACGTACAGCGATTTCGG
ACGTTACGGGCTTATGCAACGATACATGTACCGGACAGTTCCATCAGACG
ATTATCGTATTTTGGCCGCTTTACAATTTATCCGACAATCCAACTGGACG
TACGTTGGCGTCATTAGTTCCCATGGTTACGATGGAGAACGTGACGCTAT
TCTGTTTATACGGAAACTTTCAAAATATGGTGCTTGTTTGTCGAGCCAAA
GAAAAATTCCGAATTATGAAGACACTGAAAAACATTACGAGAATATTATC
GAAGAAATGCTCTCAGAAACCAGGTTAAGTGTTCTTGTTTTATTTACAAC
CAATAAAGATACAAGAAACATTTTCCGTGTCTTAAAAGCGAAAAAATTAG
AATCTAGATTCACAATACTGTGTATGTATGGCTGTACTAACTATTTGGAT
GTCGTAAATGGAAACCAGGATATAGCAAACGGTACCTTGAGTATGTATAT
CCACAATACTGAAGTTGAAGAATTCAAGTCCTGGTTTTTACGCTTGAAAC
CTGAAAACCATCCTTTCGGAGATCTGTACTTTAACACATTTTGGGAAAAC
GTATTTCACTGTCATGTTAATGAATCAGAAAATGTTAAATTGTATGACAA
AAAATGCACCATGAATGAGCAACTGGATGTCGGTCAAGGATACTACCCGT
CTACCCCTATCCATACTGTTCTCGATGCAGTTTATGGTATGGCTTTGGCA
ACCAAAAATTTCATTGAAAACACATGTAACGAATTTGAATATCGAAAATT
GGAGCTCAACAAGAACGTATCCATTGGAACAGCGAAACGAATTTGCTATA
TCGGCGTCATTATTTCCAGTACTACACGAACGCTCTCATAAGATATTTGT
ATTCAAATTTTCTTAGAAATCATCAGGAAGTCACTATGGTAAAACATTTA
CTTCCACTGCTCGTTCTTCTGTTCCTGGAAGTGATGCTATGTAACGGTGG
AGATGTTTTTGGAAATGAAATTGACCAAAGTCTAAAGAAAAAAATTATCC
GAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00067831-exon-scaffold_476-1575043694:162158..162358 | TCONS_00067831-exon-scaffold_476-1575043694:162158..162358 | Clytia hemisphaerica | exon |
| TCONS_00067831-exon-scaffold_476-1575043694:159839..160985 | TCONS_00067831-exon-scaffold_476-1575043694:159839..160985 | Clytia hemisphaerica | exon |
| TCONS_00067831-exon-scaffold_476-1575043694:156285..158117 | TCONS_00067831-exon-scaffold_476-1575043694:156285..158117 | Clytia hemisphaerica | exon |
| TCONS_00067831-exon-scaffold_476-1510915933:162158..162358 | TCONS_00067831-exon-scaffold_476-1510915933:162158..162358 | Clytia hemisphaerica | exon |
| TCONS_00067831-exon-scaffold_476-1510915933:159839..160985 | TCONS_00067831-exon-scaffold_476-1510915933:159839..160985 | Clytia hemisphaerica | exon |
| TCONS_00067831-exon-scaffold_476-1510915933:156285..158117 | TCONS_00067831-exon-scaffold_476-1510915933:156285..158117 | Clytia hemisphaerica | exon |
| TCONS_00067831-exon-scaffold_476-1491911889:162158..162358 | TCONS_00067831-exon-scaffold_476-1491911889:162158..162358 | Clytia hemisphaerica | exon |
| TCONS_00067831-exon-scaffold_476-1491911889:159839..160985 | TCONS_00067831-exon-scaffold_476-1491911889:159839..160985 | Clytia hemisphaerica | exon |
| TCONS_00067831-exon-scaffold_476-1491911889:156285..158117 | TCONS_00067831-exon-scaffold_476-1491911889:156285..158117 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_476 | supercontig | scaffold_476:156285..162358 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0007186 | G-protein coupled receptor signaling pathway |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004930 | G-protein coupled receptor activity |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0007186 |
G-protein coupled receptor signaling pathway |
| cellular_component |
GO:0016021 |
integral component of membrane |
| molecular_function |
GO:0004930 |
G-protein coupled receptor activity |
Blast
BLAST of TCONS_00067831 vs. Swiss-Prot (Human)
Match: GRM3 (Metabotropic glutamate receptor 3 OS=Homo sapiens GN=GRM3 PE=1 SV=2) HSP 1 Score: 305.449 bits (781), Expect = 3.766e-88 Identity = 244/866 (28.18%), Postives = 398/866 (45.96%), Query Frame = 3
Query: 171 DQSLKKKIIRGQGGFEVIGVFPFNEINKRSE----VDLQNGVMLAEAMRFTIQQVNKLD-ILHGYKFNLTSMFNCQTEFCVREK-------------------------IRDTFLTKTQFLIGPYSSETSYYGSILTDTFQLPSISY---SATYSDFGRYGLMQRYMYRTVPSDDYRILAALQFIRQSNWTYVGVISSHGYDGERDAILFIRKLSKYGACLSSQRKIPNYEDTEKHYENIIEEMLSETRLSVLVLFTTNKDTRNIFRVLKAKKLESRFTILCMYGCTNYLDVVNGNQDIANGTLSMYIHNTEVEEFKSWFLRLKPENHPFGDLYFNTFWENVFHCHVNESENVKLYDKKCTMNEQLDVGQGYYPSTPIHTVLDAVYGMALATKNFIENTCNEFEYRKLELNKNVSIGTAKRICYIGAQRIHKNSKHVRDELLKLVYKDGTLRISDPGNPNDGSRKSTIQYD-----ISRY---SYDQTTGQSNIEPVWTWKVQRDENTTSAEVEKKFLAKSEWFMRRHSAQNFGVCSMPCGIGQYMEHDQNYVRAKCCWTCRKC-PTDHIVVNNTCIECKNTEFPDEQHTRCLSLPIKAITWGSNXXXXXXXXXXXXGLFLTICVALIFSKNNDNRIVRASGRDLCYTIMFGICMIFVCPFLFLTETNKASCIIRGALPGFAFLTCYAPLFLKTNRIYRIFFXXXXXXXXXXXXXXXXXFAALFGVLAVQIILSIVWFTSQIP-IPESQVSKSGNYVTIHCS-SDSNPVLMILNLSLSVLFMICCTVLAFKTRRFPKNYNEAKYIGLTLYITCVVWSLFLPIFFLTRSVDYDFLREYLMCIVCILIGFVTLFGMFGPKIIMIYHAP 2636
D + ++ I+ +G + G+FP NE +E ++ G+ EAM F I ++NK D +L G K + + C + E+ I++ +IG S S + L FQ+P ISY SA SD RY Y RTVP D Y+ A + +R NWTYV ++S G GE F ++ C+++ K+ + K Y+++I E+L + V+VLF + D+R + + A + + FT + G ++ G++ +A G +++ + + V +F +F L P N+ + +F FWE F C + N + + C + +D Y + I V++AVY MA A C ++C A +I K +D LLK+ + + P NPN + S +++D + RY ++ G+ + V W + S + + S+ CS PC + V CCW C C P +++ TC++C + ++P T C LP I W + +I V + +G T V +F K+N+ +V+ASGR+LCY ++FG+ + + F F+ + + C +R G +F CY+ L KTN I RIF + RP +S SQ G++ VQI++ VW + P +++ V + C+ DS+ M+++L+ V+ +I CTV AFKTR+ P+N+NEAK+IG T+Y TC++W FLPIF++T S DY ++ MCI L GFV L +F PK+ +I P
Sbjct: 25 DHNFLRREIKIEGDLVLGGLFPINEKGTGTEECGRINEDRGIQRLEAMLFAIDEINKDDYLLPGVKLGVHILDTCSRDTYALEQSLEFVRASLTKVDEAEYMCPDGSYAIQENIPLLIAGVIGGSYSSVSIQVANLLRLFQIPQISYASTSAKLSDKSRYD----YFARTVPPDFYQAKAMAEILRFFNWTYVSTVASEGDYGETGIEAFEQEARLRNICIATAEKV-GRSNIRKSYDSVIRELLQKPNARVVVLFMRSDDSREL--IAAASRANASFTWVASDGWGAQESIIKGSEHVAYGAITLELASQPVRQFDRYFQSLNPYNN-HRNPWFRDFWEQKFQCSLQNKRN---HRRVCDKHLAID-SSNYEQESKIMFVVNAVYAMAHALHKMQRTLCP----------------NTTKLC--DAMKILDGKKLYKDYLLKINF-------TAPFNPNKDA-DSIVKFDTFGDGMGRYNVFNFQNVGGKYSYLKVGHWAETLSLDVNSIHWSRNSVPTSQ-------------CSDPCAPNEMKNMQPGDV---CCWICIPCEPYEYLADEFTCMDCGSGQWPTADLTGCYDLPEDYIRW-EDAWAIGPVTIACLGFMCTCMVVTVFIKHNNTPLVKASGRELCYILLFGVGLSYCMTFFFIAKPSPVICALRRLGLGSSFAICYSALLTKTNCIARIFDGVKNGAQRPKFISPSSQVFICLGLILVQIVMVSVWLILEAPGTRRYTLAEKRETVILKCNVKDSS---MLISLTYDVILVILCTVYAFKTRKCPENFNEAKFIGFTMYTTCIIWLAFLPIFYVTSS-DYR-VQTTTMCISVSLSGFVVLGCLFAPKVHIILFQP 830
The following BLAST results are available for this feature:
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