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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00067813 ID=TCONS_00067813|Name=TCONS_00067813|organism=Clytia hemisphaerica|type=transcript|length=2292bp
TTTTAAAGGCGTTTGACAGCGTTGTCTTTCGTGTCTTTTTTGTATTATTC
GCAAAGTCGCTCTAGTAGAGTATAAGTGAGAAGAGAATTTGATATCTTTC
AAGAAGAGATTTTTATGTTCGAAACTTAAAGCATTTTCTTGCTAATGGTA
AAGAATTTTTTACATTTGAGGTGAAGTTTTAAACCACTATCAAGTGTTTT
ATTTGAAGGTAATACAACTATAAAACATTGCATGGAAAATGATACCAATG
ATATTAGAATGGATAACATATCTCCTGTTGGCTGTTGTTGTATACAATTT
GATAGTTTACCTAAACCATGTATATGATTTAAAAGACTATCCCCCAGGCC
CTTTTCCTCTCCCTTTAATCGGGAACTTGCATTGTATTGATTTTAAAAGG
CCTcataaaacatatcaaaaactgacaaaagcTTATGGAGATGTATTCTC
GATCAGCTTTGGTATGGAGAGAATCGTCATGGTGAATACAATAGAACAAG
CCAAAGAGGCGCTCGTGACAAAATCTGCTGAATTCGCAGATGGAAAACTT
GAAGTGAAAGTTGCACAAGAAGTTGAACAAATGAATGGACGATTAATGGA
GAAAATTAATGAACCTGTCAATCTTAACGTGGAAATAAGGTTGTTCATGA
CAAATATTATCTCCACAATAGTACTTGGTGAAAGATACGAAAATATAGAA
AACCCCACATTTCAAAAGATATTAGAATTAAATAACTATTTACATTATGC
TGTATATCATGGTGatccaatttcaatttcaaaatggcagaaATATCTTC
CTATTCACTCGACTAGAATGTTATCAAGCTACTTAGCAAAGAGAGATGAA
CATTTCAGAAATGTTTTTAACAAACATAAGACGAACTTGAAACCggaaat
gttgaaaaatatgttGGACTTGTTTATCCATACATCTAGTGATGAAgagt
ttcttaaaaaacatgGAATAAGCGAGTTAACACGTGACACGATTGAAATG
GTGATGATGGACCTCCTTGATGCAAGTGTTGACAATACAGCTGTAACTCT
TTCTTGGATAATTTTGTACTTATTACATCATCCAAAATACATGAGAGAGG
CTTACAATGAGATTAAACACATGGTTAGTGCAAAAAAATACCCAAAGATG
AGCGATCANTCCACATGGTAGGAAAAAGAGTGCACAATTAAAGCGAATAG
ACTTTAGCCCACCACGCGATCTTTTATCACTTTGTGTTAGGAAAAATCCT
TGTTCGTCTGGTACAGCCTAAATTTAATCTCTTTCCTTTTTGTTCTATGA
GCAGTTTGAAGGTAATACAACTATAAAACATTGCATCGAAAATGATACCA
ATGATATTAGAATGGATAACATATCTCCTGTTGGCTGTTNTGAAtggaaa
atcaatcaaaaagggTACTCAAGTGTTGTTTCATATTTGGAATATTCATC
GAGACGAGCGGTACTGGAATGATCCAGAAATCTTTAAGCCAGAGCGTTGG
ATAgatgaaaatggaaattttgcaCCAAATNCGAGACGAGCGGTACTGGA
ATGATCCAGAAATCTTTAAGCCAGAGCGTTGGATAgatgaaaatggaaat
ttttcaccaaaaatttGTAAAAGTTACTTACCGTTTTTGATGGGCAAGCG
CGTGTGCTTTGGTGAGCAAATTGCAAGAACAGAGTTATTTATAGCTCTAA
CAAGATTATTGGTTGATTTTCATATCGAACCAGAATCTGGATTGCTGCCA
AGTCTAACTGATGTCACCATAGGTGTTAACCAATATATGACACCCTTGTA
CAAAGTAATTCTTAGAAAACGAGATGTATAAGAAGAAGCCGATGGCTATC
ATCATATCATGTAATATCAATTAATGCTTTTCATGATGCCAGAGCATGGG
AACGTCTTCAGTCTTCTACGGTATCGATACCGATAGTGAACAGATAGAAA
TTGGATTGAAAACTCTAttattctttgttaaaaattataaaaatatatac
aaaatatgATAAATATATAAATAGTTTAATATAATAGGAAATATAATATC
ACGGGTATTACTCTTAAAGTGCATCAATCTGACTTTATTTCATAGAAGTC
ATTTCCTTGTGGTCGATGGTGGTGGTTATTTATAcaagaaacttttttga
ttatATATCTGTTGACGTATTTCtttactaaaattttattacataAATTT
AACTATGAACTCCCTTTTACTCCCGCTTTTACTTTCTAAACAGCTAGCAG
TATTCAGGAGGGAACTATTGCTAGGTTGACACCACTTGATAC Run BLAST on NCBI protein sequence of TCONS_00067813-protein >TCONS_00067813-protein ID=TCONS_00067813-protein|Name=TCONS_00067813-protein|organism=Clytia hemisphaerica|type=polypeptide|length=310bp
MIPMILEWITYLLLAVVVYNLIVYLNHVYDLKDYPPGPFPLPLIGNLHCI
DFKRPHKTYQKLTKAYGDVFSISFGMERIVMVNTIEQAKEALVTKSAEFA
DGKLEVKVAQEVEQMNGRLMEKINEPVNLNVEIRLFMTNIISTIVLGERY
ENIENPTFQKILELNNYLHYAVYHGDPISISKWQKYLPIHSTRMLSSYLA
KRDEHFRNVFNKHKTNLKPEMLKNMLDLFIHTSSDEEFLKKHGISELTRD
TIEMVMMDLLDASVDNTAVTLSWIILYLLHHPKYMREAYNEIKHMVSAKK
YPKMSDXSTW Run BLAST on NCBI transcript from alignment at scaffold_476:290456..296214+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00067813 ID=TCONS_00067813|Name=TCONS_00067813|organism=Clytia hemisphaerica|type=transcript|length=5759bp|location=Sequence derived from alignment at scaffold_476:290456..296214+ (Clytia hemisphaerica)
TTTTAAAGGCGTTTGACAGCGTTGTCTTTCGTGTCTTTTTTGTATTATTC
GCAAAGTCGCTCTAGTAGAGTATAAGTGAGAAGAGAATTTGATATCTTTC
AAGAAGAGATTTTTATGTTCGAAACTTAAAGCATTTTCTTGCTAATGGTA
AAGAATTTTTTACATTTGAGGTGAAGTTTTAAACCACTATCAAGTGTTTT
AGTAAGTATATTTTCCCACCTACAATCGTGGACATAATATTTGGgacaaa
agggaaatccccagtgaaaatttaaaaccacAAATGATTTGGAAGTGCCT
TAATTTAAGGTGCGAATgtagaattttaactctgagtccaaaaatgctcc
aaaaaggctgagaatatagcctagaagccagtcaacccctccaaaattga
aatattcgatgaggTCAAATGGAAAGCCCGAAATCGTCattttcgcccga
actttaattTCTGAATAACGGTGAAATACCcagaattctcaatatatttc
gtccatgattgtagaattATCAGCGTTGTTGTTTTATGGACTTTCTGACT
TTAGCCTTAGATTTCTTGATGTCTTGTAAGCTAATTTTCAGGCCTTGTCA
AACCTCTTTTCTAAGCAAATTTGTGTACTTTATTATTTAACCTGCATTAT
GTATATGTATATGCTGAGTCATCAATCGTGATCGTTCAAACTTACTGTAT
TTTACGGACTAAAAAGTCCATACGGACTGCATTTAATACGGACTAAAAAA
GTTTATATAATACAAATTTGTAAAACACGGACTTTTTTAATAATTAAATC
GAAAAAGGTTCAGGCACCCCTGCTCGGGCAAGTTACggcctgtgcaaaaa
attaacgaatcaatcaaataaaggcctgtttcgatcgcgcgagcgtgcac
gctagGGCAAAATTTGCTAAAATAGCCTATTGACGTCAcgaattaaattt
tcttgtaCACAAAAAGTGTATGCTTTTgtgaattttcaactttttttgag
cGTACAGGAGCGCACATctcaattgataatttttcaaccaatcaagaaag
agaaaaactgctgagtaaacaaaaaaatgtaaacatacagattgtgtatg
tttttgatggaaatcaaACATTGATCGCGCAGAGTGTGCGTCCAaatcta
ttttaagaattttagcctagcgtgcacgctcgctcgatcgatggaaacag
gccttaaCGCGTGATGGCCAGTTGCATATTCCAccccttttttgggaaaa
ttttttggttattttcactCGTCATTTTAATGTCTTAAAAGTCCTGGGTC
CAAAATTCAGTTTCAgccattttgataaaattaaggaaaaacactttttg
ctgacgtcagcaaaacgtcagcaaaaatttaaaatgctaATAACTCCTGG
AATATTTGTCGAAATGAGCTCATTGATGacccaaaaactttttttctcaa
aattgatgacgtcagcaaaaatcagcaattttcgttttcctcaaaaaatg
ctgacatcatcaaTTTTAGGTCAATTTTTTACATccgcaaaaaatttttg
gaattgaAAGACGGAAAAAACTCTTgcctattgctcattccgacatcgac
tttttatttctgcctatcttctctgaggctattttctgaccccctggtga
cttttctaacttatttactatgttttctgactattCTAAAGTATTTTAAC
TGaccttgaaatatcgacccAAACGGGGTTCGAACCCATATCTCTATCCA
ACCTACCTTcgtacaaaatttgagctcatttcaataaatattccaggaga
tattagtatttcaaatttttgctgacgtcagcaaaaagagttatggctga
aacagaatttttggcccaggactttttgaaaaggtattaatatgaagagt
gaaaataaccaaaaatttttcgataaaaaggGATGGAACAACTGGCCGTC
ACGGCCGTCACGATTCATCGAATCTTTTGCACAGGTCGTTACTTGCGTGA
GTGAATAACGGTTTAAAACCTAAAAATGACCAAATGTATGCAAATTTGGC
ATTGCTCCAAGATTTTAAGTACCGAATCTCTTAAAACAATTATCATTGAT
TACCtcatcggccctttttacaccagCCCTTCATGGCGTTATTCTTTGGC
TGGTGGTGTATAATAAGGGTCGGCGTAATAAGGTGCAAAATTTTCCATAT
TTCACTGAAaagcagcaatatttttggaccattttttctcaatttaaggG
GTTTCAAGTGTaattataaattaaaaacaacCATGTTTTAATCCGTACCC
AAATATTCGCGAAATATTGATATTTAATGTAATACTAAAGTCCATTTGCT
TTAAGTGTGCTCTCTTTTTTGCTACCATAAGGAAACCAGTGTAGTTAGAG
TAgttcccttgagagtggtttccacatggtAGGAAAAAGAGTGCACAATT
AAAGCGAATAGACTTTAGCCCACCACGCGATCTTTTATCACTTTGTGTTA
GGAAAAATCCTTGTTCGTCTGGTACAGCCTAAATTTAATCTCTTTCCTTT
TTGTTCTATGAGCAGTTTGAAGGTAATACAACTATAAAACATTGCATGGA
AAATGATACCAATGATATTAGAATGGATAACATATCTCCTGTTGGCTGTT
GTTGTATACAATTTGATAGTTTACCTAAACCATGTATATGATTTAAAAGA
CTATCCCCCAGGCCCTTTTCCTCTCCCTTTAATCGGGAACTTGCATTGTA
TTGATTTTAAAAGGCCTcataaaacatatcaaaaactgacaaaagcTTAT
GGAGATGTATTCTCGATCAGCTTTGGTATGGAGAGAATCGTCATGGTGAA
TACAATAGAACAAGCCAAAGAGGCGCTCGTGACAAAATCTGCTGAATTCG
CAGGTAGGCCATCAAACCACCATGCATTTGCTATGATAACAAGAAATTAT
CAAGATTTAGTCTTTGCTGATTATGGTTCACACTGGTTAATGCTTCGAAA
ATTAGCAATCAGATCCTTAAAAATGTATGCTAATCTAGATGGAAAACTTG
AAGTGAAAGTTGCACAAGAAGTTGAACAAATGAATGGACGATTAATGGAG
AAAATTAATGAACCTGTCAATCTTAACGTGGAAATAAGTAAGTTTTTTCA
GACAGTTTCTTTAGAAATTATCTACCGAACGTCTCTAATTTCCTCTGTCA
AAAGTAAAGATATCTGCAATCAAagccataatatttgagaaaaaaaggga
atctactgggaagtttttgaaccacaatcgatttgtaagtgctcctCATT
TTTCTGACACTATCTACTttaagcgtacaaactttcgcgaaatttacgac
atttactttcgcgaatttaaggaacaaatatttttcgcgagcataaacct
TCGTGAATTGGGTGATCCAAATGAGAGgtcgaaaattcgcgaaatttacg
acatttactttcgcgaatttaaggaaaaaatatttttcgcgagcataaac
ttttgtgAATTGGgtgatcaaaatgaaaattttcacaccAAAAATAGCTT
AAAAGTGACAAATGCTTCTTGAATTCGATTAAAAACTGGTAATATATGAC
TTGAATGAGGCTTTCAAGGAATAAAAATGCTATAATTACTATTTTGTTAT
TCTGATTTCAAAACTTTacagattttcaactttttcaagaattttttgtg
agcataaactttcgcgaatcgccttgttaagaattttcaaagacattttc
tttcgcgaaaaaggtcaaaattcgcaaaaatcttgAAAGTTTCTGCtagc
gaaagtttgtacgtctaATACTTGAACGCCCCTGTCTCATTTTTCTGACA
ATATCTACTACTTGAACACCCCTGTGAGGTGACTctgaataaaatcaaaa
tttgagataAAAAAACTCACTGGGGTTGAAATTTTTACCTTCACCGGGAT
AGGGAGAAATATTTTCCCTGAGTTCAAACTATAAAACTGATAACCTtagt
atattaaaaaaagtcgaaaatgaagatgaaaaatgaataagAAAAAATCA
ACTCCTGGTAGAAAAGCTTACAATATTGAATGGATTAATTTTTTCCCACT
TTTAGGGTTGTTCATGACAAATATTATCTCCACAATAGTACTTGGTGAAA
GATACGAAAATATAGAAAACCCCACATTTCAAAAGATATTAGAATTAAAT
AACTATTTACATTATGCTGTATATCATGGTGatccaatttcaatttcaaa
atggcagaaATATCTTCCTATTCACTCGACTAGAATGTTATCAAGCTACT
TAGCAAAGAGAGATGAACATTTCAGAAATGTTTTTAACAAACATAAGACG
AACTTGAAACCggaaatgttgaaaaatatgttGGACTTGTTTATCCATAC
ATCTAGTGATGAAgagtttcttaaaaaacatgGAATAAGCGAGTTAACAC
GTGACACGATTGAAATGGTGATGATGGACCTCCTTGATGCAAGTGTTGAC
AATACAGCTGTAACTCTTTCTTGGATAATTTTGTACTTATTACATCATCC
AAAATACATGAGAGAGGCTTACAATGAGATTAAACACATGGTTAGTGCAA
AAAAATACCCAAAGATGAGCGATCANTCCACATGGTAGGAAAAAGAGTGC
ACAATTAAAGCGAATAGACTTTAGCCCACCACGCGATCTTTTATCACTTT
GTGTTAGGAAAAATCCTTGTTCGTCTGGTACAGCCTAAATTTAATCTCTT
TCCTTTTTGTTCTATGAGCAGTTTGAAGGTAATACAACTATAAAACATTG
CATCGAAAATGATACCAATGATATTAGAATGGATAACATATCTCCTGTTG
GCTGTTNTGAAtggaaaatcaatcaaaaagggTACTCAAGTGTTGTTTCA
TATTTGGAATATTCATCGAGACGAGCGGTACTGGAATGATCCAGAAATCT
TTAAGCCAGAGCGTTGGATAgatgaaaatggaaattttgcaCCAAATNCG
AGACGAGCGGTACTGGAATGATCCAGAAATCTTTAAGCCAGAGCGTTGGA
TAgatgaaaatggaaatttttcaccaaaaatttGTAAAAGTTACTTACCG
TTTTTGATGGGCAAGCGCGTGTGCTTTGGTGAGCAAATTGCAAGAACAGA
GTTATTTATAGCTCTAACAAGATTATTGGTTGATTTTCATATCGAACCAG
AATCTGGATTGCTGCCAAGTCTAACTGATGTCACCATAGGTGTTAACCAA
TATATGACACCCTTGTACAAAGTAATTCTTAGAAAACGAGATGTATAAGA
AGAAGCCGATGGCTATCATCATATCATGTAATATCAATTAATGCTTTTCA
TGATGCCAGAGCATGGGAACGTCTTCAGTCTTCTACGGTATCGATACCGA
TAGTGAACAGATAGAAATTGGATTGAAAACTCTAttattctttgttaaaa
attataaaaatatatacaaaatatgATAAATATATAAATAGTTTAATATA
ATAGGAAATATAATATCACGGGTATTACTCTTAAAGTGCATCAATCTGAC
TTTATTTCATAGAAGTCATTTCCTTGTGGTCGATGGTGGTGGTTATTTAT
AcaagaaacttttttgattatATATCTGTTGACGTATTTCtttactaaaa
ttttattacataAATTTAACTATGAACTCCCTTTTACTCCCGCTTTTACT
TTCTAAACAGCTAGCAGTATTCAGGAGGGAACTATTGCTAGGTTGACACC
ACTTGATAC Coding sequence (CDS) from alignment at scaffold_476:290456..296214+ >TCONS_00067813 ID=TCONS_00067813|Name=TCONS_00067813|organism=Clytia hemisphaerica|type=CDS|length=2799bp|location=Sequence derived from alignment at scaffold_476:290456..296214+ (Clytia hemisphaerica)
ATGATACCAATGATATTAGAATGGATAACATATCTCCTGTTGGCTGTTGT
TGTATACAATTTGATAGTTTACCTAAACCATGTATATGATTTAAAAGACT
ATCCCCCAGGCCCTTTTCCTCTCCCTTTAATCGGGAACTTGCATTGTATT
GATTTTAAAAGGCCTcataaaacatatcaaaaactgacaaaagcTTATGG
AGATGTATTCTCGATCAGCTTTGGTATGGAGAGAATCGTCATGGTGAATA
CAATAGAACAAGCCAAAGAGGCGCTCGTGACAAAATCTGCTGAATTCGCA
GATGGAAAACTTGAAGTGAAAGTTGCACAAGAAGTTGAACAAATGAATGG
ACGATTAATGGAGAAAATTAATGAACCTGTCAATCTTAACGTGGAAATAA
GGTTGTTCATGACAAATATTATCTCCACAATAGTACTTGGTGAAAGATAC
GAAAATATAGAAAACCCCACATTTCAAAAGATATTAGAATTAAATAACTA
TTTACATTATGCTGTATATCATGGTGatccaatttcaatttcaaaatggc
agaaATATCTTCCTATTCACTCGACTAGAATGTTATCAAGCTACTTAGCA
AAGAGAGATGAACATTTCAGAAATGTTTTTAACAAACATAAGACGAACTT
GAAACCggaaatgttgaaaaatatgttGGACTTGTTTATCCATACATCTA
GTGATGAAgagtttcttaaaaaacatgGAATAAGCGAGTTAACACGTGAC
ACGATTGAAATGGTGATGATGGACCTCCTTGATGCAAGTGTTGACAATAC
AGCTGTAACTCTTTCTTGGATAATTTTGTACTTATTACATCATCCAAAAT
ACATGAGAGAGGCTTACAATGAGATTAAACACATGGTTAGTGCAAAAAAA
TACCCAAAGATGAGCGATCANTCCACATGGTAGATGATACCAATGATATT
AGAATGGATAACATATCTCCTGTTGGCTGTTGTTGTATACAATTTGATAG
TTTACCTAAACCATGTATATGATTTAAAAGACTATCCCCCAGGCCCTTTT
CCTCTCCCTTTAATCGGGAACTTGCATTGTATTGATTTTAAAAGGCCTca
taaaacatatcaaaaactgacaaaagcTTATGGAGATGTATTCTCGATCA
GCTTTGGTATGGAGAGAATCGTCATGGTGAATACAATAGAACAAGCCAAA
GAGGCGCTCGTGACAAAATCTGCTGAATTCGCAGATGGAAAACTTGAAGT
GAAAGTTGCACAAGAAGTTGAACAAATGAATGGACGATTAATGGAGAAAA
TTAATGAACCTGTCAATCTTAACGTGGAAATAAGGTTGTTCATGACAAAT
ATTATCTCCACAATAGTACTTGGTGAAAGATACGAAAATATAGAAAACCC
CACATTTCAAAAGATATTAGAATTAAATAACTATTTACATTATGCTGTAT
ATCATGGTGatccaatttcaatttcaaaatggcagaaATATCTTCCTATT
CACTCGACTAGAATGTTATCAAGCTACTTAGCAAAGAGAGATGAACATTT
CAGAAATGTTTTTAACAAACATAAGACGAACTTGAAACCggaaatgttga
aaaatatgttGGACTTGTTTATCCATACATCTAGTGATGAAgagtttctt
aaaaaacatgGAATAAGCGAGTTAACACGTGACACGATTGAAATGGTGAT
GATGGACCTCCTTGATGCAAGTGTTGACAATACAGCTGTAACTCTTTCTT
GGATAATTTTGTACTTATTACATCATCCAAAATACATGAGAGAGGCTTAC
AATGAGATTAAACACATGGTTAGTGCAAAAAAATACCCAAAGATGAGCGA
TCANTCCACATGGTAGATGATACCAATGATATTAGAATGGATAACATATC
TCCTGTTGGCTGTTGTTGTATACAATTTGATAGTTTACCTAAACCATGTA
TATGATTTAAAAGACTATCCCCCAGGCCCTTTTCCTCTCCCTTTAATCGG
GAACTTGCATTGTATTGATTTTAAAAGGCCTcataaaacatatcaaaaac
tgacaaaagcTTATGGAGATGTATTCTCGATCAGCTTTGGTATGGAGAGA
ATCGTCATGGTGAATACAATAGAACAAGCCAAAGAGGCGCTCGTGACAAA
ATCTGCTGAATTCGCAGATGGAAAACTTGAAGTGAAAGTTGCACAAGAAG
TTGAACAAATGAATGGACGATTAATGGAGAAAATTAATGAACCTGTCAAT
CTTAACGTGGAAATAAGGTTGTTCATGACAAATATTATCTCCACAATAGT
ACTTGGTGAAAGATACGAAAATATAGAAAACCCCACATTTCAAAAGATAT
TAGAATTAAATAACTATTTACATTATGCTGTATATCATGGTGatccaatt
tcaatttcaaaatggcagaaATATCTTCCTATTCACTCGACTAGAATGTT
ATCAAGCTACTTAGCAAAGAGAGATGAACATTTCAGAAATGTTTTTAACA
AACATAAGACGAACTTGAAACCggaaatgttgaaaaatatgttGGACTTG
TTTATCCATACATCTAGTGATGAAgagtttcttaaaaaacatgGAATAAG
CGAGTTAACACGTGACACGATTGAAATGGTGATGATGGACCTCCTTGATG
CAAGTGTTGACAATACAGCTGTAACTCTTTCTTGGATAATTTTGTACTTA
TTACATCATCCAAAATACATGAGAGAGGCTTACAATGAGATTAAACACAT
GGTTAGTGCAAAAAAATACCCAAAGATGAGCGATCANTCCACATGGTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00067813-exon-scaffold_476-1491911889:290456..290656 | TCONS_00067813-exon-scaffold_476-1491911889:290456..290656 | Clytia hemisphaerica | exon |
| TCONS_00067813-exon-scaffold_476-1510915933:290456..290656 | TCONS_00067813-exon-scaffold_476-1510915933:290456..290656 | Clytia hemisphaerica | exon |
| TCONS_00067813-exon-scaffold_476-1575043694:290456..290656 | TCONS_00067813-exon-scaffold_476-1575043694:290456..290656 | Clytia hemisphaerica | exon |
| TCONS_00067813-exon-scaffold_476-1491911889:293021..293358 | TCONS_00067813-exon-scaffold_476-1491911889:293021..293358 | Clytia hemisphaerica | exon |
| TCONS_00067813-exon-scaffold_476-1510915933:293021..293358 | TCONS_00067813-exon-scaffold_476-1510915933:293021..293358 | Clytia hemisphaerica | exon |
| TCONS_00067813-exon-scaffold_476-1575043694:293021..293358 | TCONS_00067813-exon-scaffold_476-1575043694:293021..293358 | Clytia hemisphaerica | exon |
| TCONS_00067813-exon-scaffold_476-1491911889:293494..293592 | TCONS_00067813-exon-scaffold_476-1491911889:293494..293592 | Clytia hemisphaerica | exon |
| TCONS_00067813-exon-scaffold_476-1510915933:293494..293592 | TCONS_00067813-exon-scaffold_476-1510915933:293494..293592 | Clytia hemisphaerica | exon |
| TCONS_00067813-exon-scaffold_476-1575043694:293494..293592 | TCONS_00067813-exon-scaffold_476-1575043694:293494..293592 | Clytia hemisphaerica | exon |
| TCONS_00067813-exon-scaffold_476-1491911889:294561..296214 | TCONS_00067813-exon-scaffold_476-1491911889:294561..296214 | Clytia hemisphaerica | exon |
| TCONS_00067813-exon-scaffold_476-1510915933:294561..296214 | TCONS_00067813-exon-scaffold_476-1510915933:294561..296214 | Clytia hemisphaerica | exon |
| TCONS_00067813-exon-scaffold_476-1575043694:294561..296214 | TCONS_00067813-exon-scaffold_476-1575043694:294561..296214 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_476 | supercontig | scaffold_476:290456..296214 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005506 | iron ion binding |
| GO:0020037 | heme binding |
| GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055114 | oxidation-reduction process |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0055114 |
oxidation-reduction process |
| molecular_function |
GO:0020037 |
heme binding |
| molecular_function |
GO:0005506 |
iron ion binding |
| molecular_function |
GO:0016705 |
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen |
Blast
BLAST of TCONS_00067813 vs. Swiss-Prot (Human)
Match: CP17A (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Homo sapiens GN=CYP17A1 PE=1 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 3.515e-19 Identity = 77/333 (23.12%), Postives = 134/333 (40.24%), Query Frame = 2
Query: 338 YPPGPFPLPLIGNLHCID-FKRPHKTYQKLTKAYGDVFSISFGMERIVMVNTIEQAKEALVTKSAEFA--------------------------------------------DGKLEVKVAQEVEQMNGRLMEKINEPVNLNVEIRLFMTNIISTIVLGERYENIENPTFQKILELNNYLHYAVYHGDPISISKWQKYLPIHSTRMLSSYLAKRDEHFRNVFNKHKTNLKPEMLKNMLDLFIHT--SSDEEFLKKHGISELTRDT-IEMVMMDLLDASVDNTAVTLSWIILYLLHHPKYMREAYNEIKHMVSAKKYPKMSDXSTW*EKECTIK 1192
YP LPL+G+L + H + KL K YG ++S+ G + V+V + AKE L+ K +F+ D KLE + QE+ + L + ++++ + + +TN+IS I Y+N +P I N + + + + W K P + L S++ R++ + +K + + + NMLD + +SD SEL D I + D+ A V+ T + W + +LLH+P+ ++ Y EI V + P +SD + E TI+
Sbjct: 27 YPKSLLSLPLVGSLPFLPRHGHMHNNFFKLQKKYGPIYSVRMGTKTTVIVGHHQLAKEVLIKKGKDFSGRPQMATLDIASNNRKGIAFADSGAHWQLHRRLAMATFALFKDGDQKLEKIICQEISTLCDMLATHNGQSIDISFPVFVAVTNVISLICFNTSYKN-GDPELNVIQNYNEGIIDNLSKDSLVDLVPWLKIFPNKTLEKLKSHVKIRNDLLNKILENYKEKFRSDSITNMLDTLMQAKMNSDNGNAGPDQDSELLSDNHILTTIGDIFGAGVETTTSVVKWTLAFLLHNPQVKKKLYEEIDQNVGFSRTPTISDRNRLLLLEATIR 358
The following BLAST results are available for this feature:
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