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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00067760 ID=TCONS_00067760|Name=TCONS_00067760|organism=Clytia hemisphaerica|type=transcript|length=2004bp TCCACTGGAAATACTGCAATTTATTCTGCTTCTCTTACTAAAATTAACTT TACACCTAGtctaatttttgctaaattcagcTCATTTTGAGANATTACCa gaatatttgagaaaatattttgaaacgtTTTTGAGCCCTCTTATATCAGA GTATGAGGAAATGGGAAAAGAAATTGATAAAATTTGTTATCTAACTATAC ATGAGAGTTTGGTTGAAGAAGGAAAATCACAGAGGAGACCAGGGCTACAC ACAGAATCACCTGGTATAATTTACGTTAAAAATGGAATGAAAAGTGAGAA AATTAGAGAGCTGTGTATTGAAAAGGGTTCCGGTAGGGGTGATACAGAAA TTCCATGGGTTGTTTGTTGGGGTGGACAATACGGTATGCATGGTGAAGTT TTTACTCCTTCTGGGGGAATCTACATGGCATCTAATGTACCTAATTCATG TGAAGTTTGGGATTGTCAAATTGTAGCGAATGATAAAGGAGAAGAAATTA TTGGGAAGTTTGGAAATATTGAGCACTTGAGGGGCCTTCTGTCTGGCTCC AAGATTATGAAATCTGATAAATTGTATTGGATAACCGATCGTACACCTCA CGAATCTCTGCCATTGAAGAAAGGAACATACAGACAGTTTTTTAGGCTTG TAACACAGAGAGTTTCAGTTTGGTATGAAGATCATTCAACCAAAAACCCT AATGGTGTTGTCCCTGATCCTAAGATAACAAGAATTCTAAGAGgatcaaa atttgatgaaggtTCTGTAGCCATTGTTGGCTAAAATAACTTTGGTTTCA GGGATAAATATTGATAAATAGAAAGGTAGAAGTCATTTGAAAGAATTAAG AAACTCATCTATGATTCAAAACTATAAATTTAAGTGATATATTATAAAGC TAACTTAAGTTATATCAAATGATCAGCTCAATCTTATATACTCGATGGTA TTCACTTTCATATGTACTTTGAATTTGCATTTCAGTTTGCAATTGACATA TACTGAATTTTCCCACTTTTGCCGTTTTTCAAATAGAATACTTTACCAAA GTGGGGTTAATCATATGCATTTTGCCTGGGTGTAAAACAGTTGAACAAAT GATAAACAAAATAGTCTAATTTGCATCATTTTATAATGATTTTATAGTTT GAatcattttataaaatttgatttcttacgtttgtatttattttcatgaa tttaaaTCTTTTCAATAGTTTTTACAGTGTgctaaattttgcaaaatttc atcaaaattctcACGAGAATAAAGTGTGCCAGCAAAAAGTAAATGCCTTT TAGATACCTTGGCCTTTGATAGATACTTATTATTGTAAGGTGTGTCCCTT GAACCTATTTTTTACGTGTCGCACATTCTCGCAGTTTTCCTTTTACACTg cttaaaatttatttatttttgtaaaattcgCCATTATAATACCAATAATA CACATGTAATTCTAAAGAGTTTAGAATGGAAGAGGAATACATAACTTCAG CTATCATGCTTTAAATTTGGTCCAGAAGTTCAAAAGTTGTAAAGATTTCT TTGAAGCACCGATGCGCGATTTAATAGTTTTCTTTGAACTTGATTTTTGT TGTAAATAAGAATATTATGTATTTtatatttcatttaaaattgTCTGGCT TTATTGTAAATTATTAATAGTAAGTGTATCTGGCCCATcttcaaaaaata gaaatttattcattttcactttatttttataCCTTGAACAGGTTTACGTA GTCAAATATAACAACATAACAATATGTTAAAAACACTAAAAGagtataaa aatattaaaatacagTAGACAGCTTGCATTGACAGTAGGTTTTGACATCC TGGACTTCTGACATCCTCGACTTCTGAAACAAATCATTTAGTGTTCCAAG TGATCTTATTACCTTTGTGGTAATTTGCTTCATGCCGAACCTGATCTGAA GTCAAAGGAGTTAAGGCAGACTTTATTTTTCGGAAAAGGAAGTTTATCCC TTGA Run BLAST on NCBI protein sequence of TCONS_00067760-protein >TCONS_00067760-protein ID=TCONS_00067760-protein|Name=TCONS_00067760-protein|organism=Clytia hemisphaerica|type=polypeptide|length=207bp
MGKEIDKICYLTIHESLVEEGKSQRRPGLHTESPGIIYVKNGMKSEKIRE LCIEKGSGRGDTEIPWVVCWGGQYGMHGEVFTPSGGIYMASNVPNSCEVW DCQIVANDKGEEIIGKFGNIEHLRGLLSGSKIMKSDKLYWITDRTPHESL PLKKGTYRQFFRLVTQRVSVWYEDHSTKNPNGVVPDPKITRILRGSKFDE GSVAIVG Run BLAST on NCBI transcript from alignment at scaffold_473:188211..190214 Legend: exonthree_prime_UTRCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00067760 ID=TCONS_00067760|Name=TCONS_00067760|organism=Clytia hemisphaerica|type=transcript|length=2004bp|location=Sequence derived from alignment at scaffold_473:188211..190214 (Clytia hemisphaerica) TCAAGGGATAAACTTCCTTTTCCGAAAAATAAAGTCTGCCTTAACTCCTT
TGACTTCAGATCAGGTTCGGCATGAAGCAAATTACCACAAAGGTAATAAG
ATCACTTGGAACACTAAATGATTTGTTTCAGAAGTCGAGGATGTCAGAAG
TCCAGGATGTCAAAACCTACTGTCAATGCAAGCTGTCTActgtattttaa
tatttttatactCTTTTAGTGTTTTTAACATATTGTTATGTTGTTATATT
TGACTACGTAAACCTGTTCAAGGtataaaaataaagtgaaaatgaataaa
tttctattttttgaagATGGGCCAGATACACTTACTATTAATAATTTACA
ATAAAGCCAGAcaattttaaatgaaatataAAATACATAATATTCTTATT
TACAACAAAAATCAAGTTCAAAGAAAACTATTAAATCGCGCATCGGTGCT
TCAAAGAAATCTTTACAACTTTTGAACTTCTGGACCAAATTTAAAGCATG
ATAGCTGAAGTTATGTATTCCTCTTCCATTCTAAACTCTTTAGAATTACA
TGTGTATTATTGGTATTATAATGGcgaattttacaaaaataaataaattt
taagcAGTGTAAAAGGAAAACTGCGAGAATGTGCGACACGTAAAAAATAG
GTTCAAGGGACACACCTTACAATAATAAGTATCTATCAAAGGCCAAGGTA
TCTAAAAGGCATTTACTTTTTGCTGGCACACTTTATTCTCGTgagaattt
tgatgaaattttgcaaaatttagcACACTGTAAAAACTATTGAAAAGAtt
taaattcatgaaaataaatacaaacgtaagaaatcaaattttataaaatg
atTCAAACTATAAAATCATTATAAAATGATGCAAATTAGACTATTTTGTT
TATCATTTGTTCAACTGTTTTACACCCAGGCAAAATGCATATGATTAACC
CCACTTTGGTAAAGTATTCTATTTGAAAAACGGCAAAAGTGGGAAAATTC
AGTATATGTCAATTGCAAACTGAAATGCAAATTCAAAGTACATATGAAAG
TGAATACCATCGAGTATATAAGATTGAGCTGATCATTTGATATAACTTAA
GTTAGCTTTATAATATATCACTTAAATTTATAGTTTTGAATCATAGATGA
GTTTCTTAATTCTTTCAAATGACTTCTACCTTTCTATTTATCAATATTTA
TCCCTGAAACCAAAGTTATTTTAGCCAACAATGGCTACAGAaccttcatc
aaattttgatcCTCTTAGAATTCTTGTTATCTTAGGATCAGGGACAACAC
CATTAGGGTTTTTGGTTGAATGATCTTCATACCAAACTGAAACTCTCTGT
GTTACAAGCCTAAAAAACTGTCTGTATGTTCCTTTCTTCAATGGCAGAGA
TTCGTGAGGTGTACGATCGGTTATCCAATACAATTTATCAGATTTCATAA
TCTTGGAGCCAGACAGAAGGCCCCTCAAGTGCTCAATATTTCCAAACTTC
CCAATAATTTCTTCTCCTTTATCATTCGCTACAATTTGACAATCCCAAAC
TTCACATGAATTAGGTACATTAGATGCCATGTAGATTCCCCCAGAAGGAG
TAAAAACTTCACCATGCATACCGTATTGTCCACCCCAACAAACAACCCAT
GGAATTTCTGTATCACCCCTACCGGAACCCTTTTCAATACACAGCTCTCT
AATTTTCTCACTTTTCATTCCATTTTTAACGTAAATTATACCAGGTGATT
CTGTGTGTAGCCCTGGTCTCCTCTGTGATTTTCCTTCTTCAACCAAACTC
TCATGTATAGTTAGATAACAAATTTTATCAATTTCTTTTCCCATTTCCTC
ATACTCTGATATAAGAGGGCTCAAAAacgtttcaaaatattttctcaaat
attctGGTAATNTCTCAAAATGAgctgaatttagcaaaaattagaCTAGG
TGTAAAGTTAATTTTAGTAAGAGAAGCAGAATAAATTGCAGTATTTCCAG
TGGA Coding sequence (CDS) from alignment at scaffold_473:188211..190214 >TCONS_00067760 ID=TCONS_00067760|Name=TCONS_00067760|organism=Clytia hemisphaerica|type=CDS|length=624bp|location=Sequence derived from alignment at scaffold_473:188211..190214 (Clytia hemisphaerica) TTAGCCAACAATGGCTACAGAaccttcatcaaattttgatcCTCTTAGAA TTCTTGTTATCTTAGGATCAGGGACAACACCATTAGGGTTTTTGGTTGAA TGATCTTCATACCAAACTGAAACTCTCTGTGTTACAAGCCTAAAAAACTG TCTGTATGTTCCTTTCTTCAATGGCAGAGATTCGTGAGGTGTACGATCGG TTATCCAATACAATTTATCAGATTTCATAATCTTGGAGCCAGACAGAAGG CCCCTCAAGTGCTCAATATTTCCAAACTTCCCAATAATTTCTTCTCCTTT ATCATTCGCTACAATTTGACAATCCCAAACTTCACATGAATTAGGTACAT TAGATGCCATGTAGATTCCCCCAGAAGGAGTAAAAACTTCACCATGCATA CCGTATTGTCCACCCCAACAAACAACCCATGGAATTTCTGTATCACCCCT ACCGGAACCCTTTTCAATACACAGCTCTCTAATTTTCTCACTTTTCATTC CATTTTTAACGTAAATTATACCAGGTGATTCTGTGTGTAGCCCTGGTCTC CTCTGTGATTTTCCTTCTTCAACCAAACTCTCATGTATAGTTAGATAACA AATTTTATCAATTTCTTTTCCCAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00067760-exon-scaffold_473-1491911889:188211..190214 | TCONS_00067760-exon-scaffold_473-1491911889:188211..190214 | Clytia hemisphaerica | exon |
TCONS_00067760-exon-scaffold_473-1510915933:188211..190214 | TCONS_00067760-exon-scaffold_473-1510915933:188211..190214 | Clytia hemisphaerica | exon |
TCONS_00067760-exon-scaffold_473-1575043694:188211..190214 | TCONS_00067760-exon-scaffold_473-1575043694:188211..190214 | Clytia hemisphaerica | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_473 | supercontig | scaffold_473:188211..190214 . |
Blast
The following BLAST results are available for this feature:
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