TCONS_00067751 (transcript) - C. hemisphaerica

Overview
NameTCONS_00067751
Unique NameTCONS_00067751
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length405

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00067751 ID=TCONS_00067751|Name=TCONS_00067751|organism=Clytia hemisphaerica|type=transcript|length=405bp
ACGTCGTTGAATTCGAATATTTATACTTTATTATGTTATGGCAAGAAACT
TTTTATTGTTCTCTTTAAAAGGGAGAAAAATACTTTGGCATACATTCGAC
AAAAGACGTTCCAGTCGAATAGTAGGAATGTTCGGAAACCGAACGAAGAA
GAAACTAggatgtaatttttttattgagaTTATATTATATGGATGTGCAA
TGATGAATTGAGTTTAAAGTCCCGAAAAGGGTATAGAGAGGCACCTTTTT
CATGAGAAATGAAGTCACTTGATCCCTTTGAGACAAAATCTTTAAACCAA
TTAATTTCTAATTCCTTTTTTTAAAATGCTGAATCTGGATCGTAAATTTT
CTGACAGACAACCTTATTCTTTAGAAAATATCAAGTAGTTAAAGTATGAA
TCGCG
Run BLAST on NCBI

transcript from alignment at scaffold_473:126470..126874

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00067751 ID=TCONS_00067751|Name=TCONS_00067751|organism=Clytia hemisphaerica|type=transcript|length=405bp|location=Sequence derived from alignment at scaffold_473:126470..126874 (Clytia hemisphaerica)
CGCGATTCATACTTTAACTACTTGATATTTTCTAAAGAATAAGGTTGTCT
GTCAGAAAATTTACGATCCAGATTCAGCATTTTAAAAAAAGGAATTAGAA
ATTAATTGGTTTAAAGATTTTGTCTCAAAGGGATCAAGTGACTTCATTTC
TCATGAAAAAGGTGCCTCTCTATACCCTTTTCGGGACTTTAAACTCAATT
CATCATTGCACATCCATATAATATAAtctcaataaaaaaattacatccTA
GTTTCTTCTTCGTTCGGTTTCCGAACATTCCTACTATTCGACTGGAACGT
CTTTTGTCGAATGTATGCCAAAGTATTTTTCTCCCTTTTAAAGAGAACAA
TAAAAAGTTTCTTGCCATAACATAATAAAGTATAAATATTCGAATTCAAC
GACGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_042309XLOC_042309Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00067751-exon-scaffold_473-1491911889:126470..126874TCONS_00067751-exon-scaffold_473-1491911889:126470..126874Clytia hemisphaericaexon
TCONS_00067751-exon-scaffold_473-1510915933:126470..126874TCONS_00067751-exon-scaffold_473-1510915933:126470..126874Clytia hemisphaericaexon
TCONS_00067751-exon-scaffold_473-1575043694:126470..126874TCONS_00067751-exon-scaffold_473-1575043694:126470..126874Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_473supercontigscaffold_473:126470..126874 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.362018	0.176512	0.204948	0	0	0	0	0	0.457598	0	0	0	0	0	0	0.220603	0.543531	0.278551	0	0.20135	0.700039	1.53654	0.207541	1.3208	1.55473	2.25478	0.744597	0	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00067751 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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