TCONS_00067740 (transcript) - C. hemisphaerica

Overview
NameTCONS_00067740
Unique NameTCONS_00067740
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length173

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00067740 ID=TCONS_00067740|Name=TCONS_00067740|organism=Clytia hemisphaerica|type=transcript|length=173bp
AAAAACTACACTacattataataaaaataaaacgtaaACACAAAAGGGTT
TTATATGTACAATTAGAATTTCCTGGGTCGTTACCCGTACTGTAATTTTC
TACTTATatatattgttatattttttcccttatataaaatatttacaatc
aCAGATTCTGCTCGCAGAATTTC
Run BLAST on NCBI

transcript from alignment at scaffold_473:262..434

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00067740 ID=TCONS_00067740|Name=TCONS_00067740|organism=Clytia hemisphaerica|type=transcript|length=173bp|location=Sequence derived from alignment at scaffold_473:262..434 (Clytia hemisphaerica)
GAAATTCTGCGAGCAGAATCTGtgattgtaaatattttatataagggaaa
aaatataacaatatatATAAGTAGAAAATTACAGTACGGGTAACGACCCA
GGAAATTCTAATTGTACATATAAAACCCTTTTGTGTttacgttttatttt
tattataatgtAGTGTAGTTTTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_042298XLOC_042298Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00067740-exon-scaffold_473-1491911889:262..434TCONS_00067740-exon-scaffold_473-1491911889:262..434Clytia hemisphaericaexon
TCONS_00067740-exon-scaffold_473-1510915933:262..434TCONS_00067740-exon-scaffold_473-1510915933:262..434Clytia hemisphaericaexon
TCONS_00067740-exon-scaffold_473-1575043694:262..434TCONS_00067740-exon-scaffold_473-1575043694:262..434Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_473supercontigscaffold_473:262..434 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00067740 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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