|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00067721 ID=TCONS_00067721|Name=TCONS_00067721|organism=Clytia hemisphaerica|type=transcript|length=1349bp
aaatatttttccgttaaattcgcgaaagtaaatgtcgtgaatttcgcgat
ttttcgtcctcgcgaaagtttctgctcgcgaaagtttgtacgcctaaagt
agttttCATGAccaaatcaattaaaaaaataatgacttTTACTACTTTGG
GAACGGAATACCCATTAGTTGGACAAAGAGTTTTTAACTTGTTTGAGTAA
TTTCTAGACTcgatgaaaatttttactttttagaaaATCTGTTCCgcttt
ttccggacaccctgtatatttGTTGACGTAACTTTTCGGATTCAAAAAGA
AGTAAAACCTTTGTATGGCGTTGTATTTGTTGTTAAACACGGTTTCACTC
TCGGTCAGCAGTGAGGCATTTGGCTTAACCTTTAAAAAATGGTAGTTTGC
CAAAATTTGGCACACAGGTTTCTTATGGGTCTTAGAACCATCAGAGAAAA
TCCTCAGTCGGCATTGTAGCCTttagaaaacaaataaaatatagACGTGT
ATTACGTCATTGTCGAGAGTTGGGACTTATTTTCTAAGGTCggtcaaaaa
gtttcaaataaatgCGAGTCTGGTATACTCTTGCTTATTTAAAACAGCAT
GTAATGGAGTGGATCTAGACGGCGAAATTCTCAAAACCCCTCGTCTGAGA
AATCGCTAAGGATTTAATGGAAATATACGCTACCGGTCATTTAGGTTAAA
TACCACCCGGAAAAAAGAAGCaagaaaaatgtgttttttttttaaataag
tgtACAGTCGTTTTGTaaaagattcccatttccgcactaagattcttgtc
acttttccggaatcttCCCGCTTTTTTTTTCAGGGATAATTATAACCAGC
ATGAAATTAGAAAGTGTTTGTTTATAATAATATAGAAAATGTTATGTTTA
CTCACGATGCTTTTCAACTACCCAAAgttttggtctttttttttcgctag
aaaagtggcaaaggaatcttagtgcggaaatgggaatcttttACAAAACG
ATGGTAATATGTGCATGTTTGTCATAATCTACCTTGATTTCGATAATTCG
ATAAATTATACAAGTGCATTTAAACTATTATTTTAATCTacatttaattt
attttgtacatttttaatAGTGACCATATGTAATAAAATCATgtaaaaca
tcaaagaaaaatctaaatggtacgttgtaaatgaaatctaattttatcag
cgtgtgttatgaatttgagaagctttcataaTTCCTCGTTTAAAATTTcg
aatgtaaatattttgacaaatattgtttcaattgacttgaaactttttcc
ataatcagacataccgactcgctatctgaaaatatcagttagaaagtga Run BLAST on NCBI transcript from alignment at scaffold_472:436087..437435 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00067721 ID=TCONS_00067721|Name=TCONS_00067721|organism=Clytia hemisphaerica|type=transcript|length=1349bp|location=Sequence derived from alignment at scaffold_472:436087..437435 (Clytia hemisphaerica)
tcactttctaactgatattttcagatagcgagtcggtatgtctgattatg
gaaaaagtttcaagtcaattgaaacaatatttgtcaaaatatttacattc
gAAATTTTAAACGAGGAAttatgaaagcttctcaaattcataacacacgc
tgataaaattagatttcatttacaacgtaccatttagatttttctttgat
gttttacATGATTTTATTACATATGGTCACTattaaaaatgtacaaaata
aattaaatgtAGATTAAAATAATAGTTTAAATGCACTTGTATAATTTATC
GAATTATCGAAATCAAGGTAGATTATGACAAACATGCACATATTACCATC
GTTTTGTaaaagattcccatttccgcactaagattcctttgccacttttc
tagcgaaaaaaaaagaccaaaacTTTGGGTAGTTGAAAAGCATCGTGAGT
AAACATAACATTTTCTATATTATTATAAACAAACACTTTCTAATTTCATG
CTGGTTATAATTATCCCTGAAAAAAAAAGCGGGaagattccggaaaagtg
acaagaatcttagtgcggaaatgggaatcttttACAAAACGACTGTacac
ttatttaaaaaaaaaacacatttttcttGCTTCTTTTTTCCGGGTGGTAT
TTAACCTAAATGACCGGTAGCGTATATTTCCATTAAATCCTTAGCGATTT
CTCAGACGAGGGGTTTTGAGAATTTCGCCGTCTAGATCCACTCCATTACA
TGCTGTTTTAAATAAGCAAGAGTATACCAGACTCGcatttatttgaaact
ttttgaccGACCTTAGAAAATAAGTCCCAACTCTCGACAATGACGTAATA
CACGTctatattttatttgttttctaaAGGCTACAATGCCGACTGAGGAT
TTTCTCTGATGGTTCTAAGACCCATAAGAAACCTGTGTGCCAAATTTTGG
CAAACTACCATTTTTTAAAGGTTAAGCCAAATGCCTCACTGCTGACCGAG
AGTGAAACCGTGTTTAACAACAAATACAACGCCATACAAAGGTTTTACTT
CTTTTTGAATCCGAAAAGTTACGTCAACaaatatacagggtgtccggaaa
aagcGGAACAGATtttctaaaaagtaaaaattttcatcgAGTCTAGAAAT
TACTCAAACAAGTTAAAAACTCTTTGTCCAACTAATGGGTATTCCGTTCC
CAAAGTAGTAAaagtcattatttttttaattgatttggTCATGaaaacta
ctttaggcgtacaaactttcgcgagcagaaactttcgcgaggacgaaaaa
tcgcgaaattcacgacatttactttcgcgaatttaacggaaaaatattt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00067721-exon-scaffold_472-1491911889:436087..437435 | TCONS_00067721-exon-scaffold_472-1491911889:436087..437435 | Clytia hemisphaerica | exon |
| TCONS_00067721-exon-scaffold_472-1510915933:436087..437435 | TCONS_00067721-exon-scaffold_472-1510915933:436087..437435 | Clytia hemisphaerica | exon |
| TCONS_00067721-exon-scaffold_472-1575043694:436087..437435 | TCONS_00067721-exon-scaffold_472-1575043694:436087..437435 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_472 | supercontig | scaffold_472:436087..437435 . |
Blast
The following BLAST results are available for this feature:
|
