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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00067715 ID=TCONS_00067715|Name=TCONS_00067715|organism=Clytia hemisphaerica|type=transcript|length=712bp
ATTTAGTACTTTTCTTTACTGACAAAGAAAGTCTTTTATCTGGTTCTGAA
CTTCTAAACCaagttttcgaaagttttggGCTATTAGTTAACAAACTCAA
AACAGAAACTATGGTTCTGAATCACCAAATTCTTGAACAACACTATCACA
ACACAATCATTTCACTCGACGAGACACCAATCAAAAACGTCACCAAATTC
ACATACCTTGGATCGATAATTAGTCATGACGAGCCTAATACCGGAAATTC
AGAAGTCAATAATCGCATTCAAATGGCATCTGCTAAATTCAACGAAATGT
CTGATCTCCTTCAAAATCAACGAATCAACCTTCGCACCCGAATCAACTTC
CTCAATAGTTTTGTGAGAAGTCGGCTTACGTACGCGTGTCAAAACTGGAA
TCtaacaaaaaatcaatttaaaagatTGAATGTTAGTTATCGTTCTTTTC
TTCGAAGAATGATACGTAATGGTCGAAAGTTGGTAAATCCGACTGAAAAC
GATTATCGTTTGATTATATCTAATCAACATCTGCACGAAATTTGTCAGAC
ACGtgacttagaattttttataagagaTCAACAAAAGAACTATATGTCAC
ATGTTATTCGAATGAACGCGGAACGTTCAATCAAGCAGCTGGCTTTTAAC
GATGATAAATATACAAAGAGAGGAAGGCCTGTGAGAACTCTACTCGACCA
GGTCTTAGATAA Run BLAST on NCBI protein sequence of TCONS_00067715-protein >TCONS_00067715-protein ID=TCONS_00067715-protein|Name=TCONS_00067715-protein|organism=Clytia hemisphaerica|type=polypeptide|length=236bp
LVLFFTDKESLLSGSELLNQVFESFGLLVNKLKTETMVLNHQILEQHYHN
TIISLDETPIKNVTKFTYLGSIISHDEPNTGNSEVNNRIQMASAKFNEMS
DLLQNQRINLRTRINFLNSFVRSRLTYACQNWNLTKNQFKRLNVSYRSFL
RRMIRNGRKLVNPTENDYRLIISNQHLHEICQTRDLEFFIRDQQKNYMSH
VIRMNAERSIKQLAFNDDKYTKRGRPVRTLLDQVLD Run BLAST on NCBI transcript from alignment at scaffold_472:392267..392978 Legend: exonthree_prime_UTRCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00067715 ID=TCONS_00067715|Name=TCONS_00067715|organism=Clytia hemisphaerica|type=transcript|length=712bp|location=Sequence derived from alignment at scaffold_472:392267..392978 (Clytia hemisphaerica)
TTATCTAAGACCTGGTCGAGTAGAGTTCTCACAGGCCTTCCTCTCTTTGT
ATATTTATCATCGTTAAAAGCCAGCTGCTTGATTGAACGTTCCGCGTTCA
TTCGAATAACATGTGACATATAGTTCTTTTGTTGAtctcttataaaaaat
tctaagtcaCGTGTCTGACAAATTTCGTGCAGATGTTGATTAGATATAAT
CAAACGATAATCGTTTTCAGTCGGATTTACCAACTTTCGACCATTACGTA
TCATTCTTCGAAGAAAAGAACGATAACTAACATTCAatcttttaaattga
ttttttgttaGATTCCAGTTTTGACACGCGTACGTAAGCCGACTTCTCAC
AAAACTATTGAGGAAGTTGATTCGGGTGCGAAGGTTGATTCGTTGATTTT
GAAGGAGATCAGACATTTCGTTGAATTTAGCAGATGCCATTTGAATGCGA
TTATTGACTTCTGAATTTCCGGTATTAGGCTCGTCATGACTAATTATCGA
TCCAAGGTATGTGAATTTGGTGACGTTTTTGATTGGTGTCTCGTCGAGTG
AAATGATTGTGTTGTGATAGTGTTGTTCAAGAATTTGGTGATTCAGAACC
ATAGTTTCTGTTTTGAGTTTGTTAACTAATAGCccaaaactttcgaaaac
ttGGTTTAGAAGTTCAGAACCAGATAAAAGACTTTCTTTGTCAGTAAAGA
AAAGTACTAAAT Coding sequence (CDS) from alignment at scaffold_472:392267..392978 >TCONS_00067715 ID=TCONS_00067715|Name=TCONS_00067715|organism=Clytia hemisphaerica|type=CDS|length=708bp|location=Sequence derived from alignment at scaffold_472:392267..392978 (Clytia hemisphaerica)
ATCTAAGACCTGGTCGAGTAGAGTTCTCACAGGCCTTCCTCTCTTTGTAT
ATTTATCATCGTTAAAAGCCAGCTGCTTGATTGAACGTTCCGCGTTCATT
CGAATAACATGTGACATATAGTTCTTTTGTTGAtctcttataaaaaattc
taagtcaCGTGTCTGACAAATTTCGTGCAGATGTTGATTAGATATAATCA
AACGATAATCGTTTTCAGTCGGATTTACCAACTTTCGACCATTACGTATC
ATTCTTCGAAGAAAAGAACGATAACTAACATTCAatcttttaaattgatt
ttttgttaGATTCCAGTTTTGACACGCGTACGTAAGCCGACTTCTCACAA
AACTATTGAGGAAGTTGATTCGGGTGCGAAGGTTGATTCGTTGATTTTGA
AGGAGATCAGACATTTCGTTGAATTTAGCAGATGCCATTTGAATGCGATT
ATTGACTTCTGAATTTCCGGTATTAGGCTCGTCATGACTAATTATCGATC
CAAGGTATGTGAATTTGGTGACGTTTTTGATTGGTGTCTCGTCGAGTGAA
ATGATTGTGTTGTGATAGTGTTGTTCAAGAATTTGGTGATTCAGAACCAT
AGTTTCTGTTTTGAGTTTGTTAACTAATAGCccaaaactttcgaaaactt
GGTTTAGAAGTTCAGAACCAGATAAAAGACTTTCTTTGTCAGTAAAGAAA
AGTACTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00067715-exon-scaffold_472-1491911889:392267..392978 | TCONS_00067715-exon-scaffold_472-1491911889:392267..392978 | Clytia hemisphaerica | exon |
| TCONS_00067715-exon-scaffold_472-1510915933:392267..392978 | TCONS_00067715-exon-scaffold_472-1510915933:392267..392978 | Clytia hemisphaerica | exon |
| TCONS_00067715-exon-scaffold_472-1575043694:392267..392978 | TCONS_00067715-exon-scaffold_472-1575043694:392267..392978 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_472 | supercontig | scaffold_472:392267..392978 . |
Blast
The following BLAST results are available for this feature:
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