TCONS_00067697 (transcript) - C. hemisphaerica

Overview
NameTCONS_00067697
Unique NameTCONS_00067697
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1532

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00067697 ID=TCONS_00067697|Name=TCONS_00067697|organism=Clytia hemisphaerica|type=transcript|length=1532bp
GCAGAAGCAAGAAACATATTGAAAGTGCAATCACAAAAGGAAAAGCCAGA
GAAAGTGATAGCAAACAAACCACCTGTTAAATCGGCTGGTAAGAAACAAT
TGACACAAGAAATGAAAGGCGGTAGGAATAAACGAATACCTCTTCGAGTA
TCTTTGAGGGCTGAAGCTGCCACTGGTAAAGTCCAACAAGAAGAAAAATC
CAAAACGATCGATCTCATTATAAAAGcCGATGTCAGTGGAAGTTTGGAAG
CAATAGTCAATATTTTAAGTCGGTACCATTCGACAGATATCACTTTGAAT
GTTCTACATGCTAGCGTTGGAAGTGTGAATGAAAATGATCTTAAAATGTT
ACAAACTTCAGAAGacagcATTGTGTATGCTTTCAATGTGGATGTCACAA
AAAGCCTTATGACACAAGCTGAAAAATTGGACGTCCCTGTCAAGCAGTTT
GATATCATTTACAAACTtctggatgatttaaagGAGAAGCTTGAGAACAC
GTTACCGATGAGAAGCGAGGAACACATCATCGGTGAAGCCGAAGTATTGA
AGGTTTTCAAATTGACCGGTAGCCGAAAGAATGTAGCGGCAGGTTGTCGC
GTCAAAGAGGGTTTCCTCGATAATTCGAACTCTGAACATTTATGGAAAGT
TATACGCGATCACCAACCAGTCTATGAAGCTGGTATCAAATCATTAAAAC
GTGGTAAAGAGGACATTGCATTAGCCAAGAAGATGACCGAATGTGGTGTA
ACGTTAGATAACTTTGAAGACTATCGAGAGGGAGATAAGATTCTTTGTGT
AAGGGTTGATAGGATCAAACAGGTGGTAGACTGGAAACTATGATCGAAAG
AAAGCATTATAGTGAACCCGTGGTTGATTCTTGGTGCAAAAAGTCCTGCA
GTGGTTTGGCTTGggggataaaccaaataaacaATTCAAATGGTTTTTCA
CTCATTGCTAAGAAATACTTTCAAACAGAAATGTTGTAAATGTCATTTGC
TATTGTTGCCCAAACATTCGAGGATGGTCTCAAGCTATGGTATCCAGACT
AACAAAGGTATATTCGAAATTAAGAAATCGAAAAGGAACACTCATAAAGA
CATATCAAGTAATTTATCTTGGATGAaggataaaaaatatttagagtTTT
ACCAATGTGAGAAGGCACTGCACCCTGTGAAACAACTATTAACTTTACAT
AAATTTGAGCAACTTTCAAAGTCAACTTTATTGAAAGGATTTATCAAAGG
TGAAGGATTTCTACCAAGCGTTGTGCAAATGACCAACCAAATAGAATTCA
ACAAAGGGAATTTAGAATTGGGTAAAACtgttttcgaaattttggatAGT
GGTACATTAGCGATGTTAAATGAACGTCAAGGAAACGAACATGATTATTA
TCACTTACAAGATTATGATGGACCACACCCAGTTTTTGAGGACCCAAAAT
TCGCACCGGTTTACAAAAACTTTGATCAAGCGAAAACAAATCTATCCAag
GTTTGTACTCGACATGAATCTTTGGAAGTCAA
Run BLAST on NCBI

transcript from alignment at scaffold_472:369468..380693-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00067697 ID=TCONS_00067697|Name=TCONS_00067697|organism=Clytia hemisphaerica|type=transcript|length=11226bp|location=Sequence derived from alignment at scaffold_472:369468..380693- (Clytia hemisphaerica)
GCAGAAGCAAGAAACATATTGAAAGTGCAATCACAAAAGGAAAAGCCAGA
GAAAGTGATAGCAAACAAACCACCTGTTAAATCGGCTGGTAAGAAACAAT
TGACACAAGAAATGAAAGGCGGTAGGAATAAACGAATACCTCTTCGAGTA
TCTTTGAGGGCTGAAGCTGCCACTGGTAAAGTCCAACAAGAAGAAAAATC
CAAAACGATCGATCTCATTATAAAAGGTATGCTAGCAGCTCGTTTAATGC
AAAACATTTGACTCCTTATCTGATGGTCATTCATGATTCATCAGCTTGGA
AGCGATAATCTTTCAGTTGTTTGGGAGAAAGAAGAACATTGAATCTCGTT
GTTAATGATTTTGATGATTTTCATATTGTTTCTTTTTTTGTTTAGCCGAT
GTCAGTGGAAGTTTGGAAGCAATAGTCAATATTTTAAGTCGGTACCATTC
GACAGATATCACTTTGAATGTTCTACATGCTAGCGTTGGAAGTGTGAATG
AAAATGATCTTAAAATGTTACAAACTTCAGAAGGTTAGGAGACGTCATTT
TTGGTTTTATCTCTGATTCTTTCCTGGCAAGCATATTTTTTATTAAAAAT
ATCATGTGTTATCGTCCAAAATAATCATAGATTCACGATATTCATTACCG
TATTCCCTCCCTCGATTAAGCGAGGAATCAAAATTTAGATTTGGAGGGTG
GTGGTAAATAGAGGGAATATGGTTCTTTATGATGACAGAACAAGTGGGAT
TTTTGGTGTTCTTCCACTCGAAAAATAATTCGTCACCAGGGTCATGAAAT
TAGGTTTTGTAGATTTAGATAGACTTTGATCTAGATCGTTAAAGATCGCT
TTGAAATTATCAGGTTTTTTAATAGCAAGAAAATGATTTAGTTCAAGACT
GTTGGTGTTAAGTTAGGCAAAAACCTTTTATTTTTCAGACAGCATTGTGT
ATGCTTTCAATGTGGATGTCACAAAAAGCCTTATGACACAAGCTGAAAAA
TTGGACGTCCCTGTCAAGCAGTTTGATATCATTTACAAACTTCTGGATGA
TTTAAAGGTATTATTTTCAGTTATGATTTGGTTTATTACGGACATCAACC
ACTATCAACTAACATCAGACGAAATCAAAGGGGGATTTCATTCGTACCAA
TCTAATTTAAAAAGTGTTGCCGCTCGATCGAGATACGATTAGATTCAATT
TATTCAATTTTTGATTATGTTCGGTTGCTGATCGAAAAACTGTGTCTTTA
TCTCCTCATTGCTAGTGTGTTGGAACACACACTTGTCCAACACACTAGCA
ATGTGGAGATGGATTTTTCCCAATTCACTGTCTCTGTCCAGTCAGTAGAC
AAGAATTCACTTCCAGCTCTACCGAGTGGCAATTGAGTCCTCGGGTTCCA
CATGGACCCGTAGCTCAATAGTAGAGCAAACGCCCGCGAATGTCATGGTT
GTGAGTTCGAGTCTCACCTTCACTTCAATGTGATTATTTCTTTTGAAGAC
AGTCGACCTAGTGTTTTTTTTTCTCCTTGCCATTCAGGAGAAGCTTGAGA
ACACGTTACCGATGAGAAGCGAGGAACACATCATCGGTGAAGCCGAAGTA
TTGAAGGTTTTCAAATTGACCGGTAGCCGAAAGAATGTAGCGGCAGGTTG
TCGCGTCAAAGAGGGTTTCCTCGATAATTCGAACTCTGAACATTTATGGA
AAGTTATACGCGATCACCAACCAGTCTATGAAGGTAAGTAGATGGTGTTT
ATTGATTTAAATTTGTAGGTTAACTTTGAACAAGTGGTGTTACTTACTTT
TTGGGGGTTCAAGTAAAAATGTCTTTTCATTATGAGAGTCTGAGCAATAG
AAGGTTACATTCAGTTAAAACTCCTTGGTTAGTCGTGCCGATTTGCCGTC
ATTGTTTTCTTGTCACTGTTTACTATCAATGCCATCTTCTGGCAGATATT
CAGCATCCTCCTTCGTGACTTCGCTGCTTCTTACCGGCTAATATTCTTTT
ATATAACGACTGATTGTCAAGTAGTACATCTTTTGTAAACATACAAAATA
CTTCTGTTCTGTCAGCTGGTATCAAATCATTAAAACGTGGTAAAGAGGAC
ATTGCATTAGCCAAGAAGATGACCGAATGTGGTGTAACGTTAGATAACTT
TGAAGACTATCGAGAGGGAGATAAGATTCTTTGTGTAAGGGTTGATAGGA
TCAAACAGGTGGTAGACTGGAAACTATGATCGAAAGAAAGCATTATAGTG
AACCCGTGGTTGATTCTTGGTGCAAAAAGTCCTGCAGTGGTTTGGCTTGG
TAAGATAAGCAAATTGACCGATGCTTTGATATTGAAATTGAAGGTAGAAA
GTTCTCCTATTTATAATATGCATTTTACATCAACGTGGTTAGAATGATTT
ATATTCTTGGGCAAGTTTGGATTAACACGAAGTGTTTAAAATAATGTCCT
GAACAAGGAACATTTTACATGAAACGATGGAATAGATTATCTGTTCCACT
CTGTCATTTCTCACCAGCTCAAATCTGAATGAGATTTTTAAATGATCCAA
ACTACCAGATTCAACAGGAATTGGATTGAATTACGAATTCGAAGAATAGC
GCAGCACTACAACAGTGATATTTTCGGAATTCTTTTCATAAAATCTGCAA
TTTAGAAATATTTTTGTTACTGTATATAATAGAAAGATTTTACAATTTTA
AATATGAAGCATTCATGATAAAGCTCAGAAGTACTGTTTTTGTTTGACGT
AATCGTCGTCATTCATAAAAAGTTATCTCAAATTTATTTCTCTTCGACCA
TCTTCACAATCAAAACAGACCAATCTCGAAATTTAGTAGTAGTAGTAGTA
GTAGCTAAACAGGAGGATTTTTAGTTTTAATTCTTCAACTCTAAAACGAA
ACCTTTTGCTTTTATGACGGCGAATCTAAACTTAAAAAATCTATCCACAA
CAGATACATTTTAATACATTAGGTTGTATGTCCATCTGATGGCTGTTGGT
GGAGCTGGGTTTGAGGGAATCTAGCCTCTACTCCCAGCTCCCAGTTACGT
ACCGCCTAGATAATATTACCCAATCCAAAGTAAAGAAAGGAACCCAAAGC
CCTTGGATTGCAAGACAAACGCTCTTCTAATTGAGCTATCCGGTCACTAT
ATATAACCTCTGTAGAACCTTTTACAGGAACTTTAGATTGCTTTTTTTTT
CATTTTCAAGTAAAAGCTTTTTGCGTAATGTTTCTAACAATGTGAATTCT
TCAAGTGTTTTTATTTTCAGGGGGATAAACCAAATAAACAATTCAAATGG
TTTTTCACTCATTGCTAAGAAATACTTTCAAACAGAAATGTTGTAAATGT
CATTTGCTATTGTTGCCCAAACATTCGAGGATGGTCTCAAGCTATGGTAT
CCAGACTAACAAAGGTATATTCGAAATTAAGAAATCGAAAAGGAACACTC
ATAAAGACATATCAAGTAATTTATCTTGGATGAAGGATAAAAAATATTTA
GAGTTTTACCAATGTGAGAAGGCACTGCACCCTGTGAAACAACTATTAAC
TTTACATAAATTTGAGCAACTTTCAAAGTCAACTTTATTGAAAGGATTTA
TCAAAGGTGAAGGATTTCTACCAAGCGTTGTGCAAATGACCAACCAAATA
GAATTCAACAAAGGGAATTTAGAATTGGGTAAAACTGTTTTCGAAATTTT
GGATAGTGGTACATTAGCGATGTTAAATGAACGTCAAGGAAACGAACATG
ATTATTATCACTTACAAGATTATGATGGACCACACCCAGTTTTTGAGGAC
CCAAAATTCGCACCGGTTTACAAAAACTTTGATCAAGCGAAAACAAATCT
ATCCAAGGTATATTTCAAAATGATTAATAGTTANTTCTTTCTCGCTATTT
AGTTTTTATATTTAAAGTTTTTTATCCTTAGCTGTTTTTTCTAAGTATCT
TTAATACCGGGTGACCCACGAAAAAGTTCAGACGTTTCCCGACGTCTTGA
GGCCGAACAGATGTCCCAAAGTGCTTGGAGTTTTGATATTTAGAAAGTAG
ATACCCTAACATAAAATTTGAGCTATCACTTTTTAAATTTGACCAACTTG
TTCTCTACTTATGAGCTTTTAAAGTTAAAATTCACTTTTTGGAAAGTGTA
AAAAACACGTAAAAAAGAGGTATTAAATTTATGCAATCAATTAGAAAATC
ACTTACAATTGACTTATTCAACGAGTTTTATGACATTAATAATTAATAAA
AACACCTTTAAAAGTAACTTTTGTTTAAAACAAAACTAGTTTTTATAAAA
ATTGGCGCTTTTGTAGATTTTTCAGATTTTTTTCAAAAACTGTATATCAA
AAACGTCTAAAAATACCAAATTTGATACCCCTTTTTTACGTGTTTTTTAC
ACTTTCCGAAAAGTGAATTTTGACTTTAAAAGCTCATAAGTAGAGAGCAA
GTTGGTCAAATTTAAAAAGTGATAACTCAAATTTTAAGTTAGGATATCTG
CTCTCTAAATATCAAAACTCCAAGCACTTTGGGACATTTGTTCGGCCTCA
AGACGTCGGGAAACGTCTGAACTTTTTCGTGGGTCACCCGGTATATATTG
TACGAGTAGTGATAACTTGTCAATCGTCAACTTGACAAATAAAACCAAAC
CAATCACCCCCTACATTTGCAATCTGCAGTGTTCACATGTTTGTTCGAGC
TAAGCCTCTCACTAGTGCCTTTTTCTATGTTTTCTTTCGTTCTATTGTTT
ATTTCTCCTTCGTTGTTTTGATGAAATCAACATCAAAACATTCGAAAAAA
GAATCGAACATTCATTCAAAAGAACAACAAAAAAACTCGCTTACCAGACC
ACTTATGTTGAATGCGGTCTCCTATTTCTATGTGTAAGATATTAAAGATA
CGGTGAATATCGTATCTCACTTAGCCAATCAGAGTATTAATAACTTTCAG
GTGGACAATAACAAACGTTATTTCAACCCATCGACTTGAATGCCATCGAC
CACCAGGTCGAAGGCATTAACGAGTTTGTGTATCTGTATTTTCTGTGACG
GAAATGGTTCTGATTTGTCTAGATCCTGATCTACTGAGGACAATGGTAAA
TAAGCACTTTTACCGTCCTCTTTATTGCGGTTCAGAATTACAGCTTGTTC
CCAATCATTCCAGTCACTCCAGTCACTCCTCCTTTCTCAAAGGGTAGATA
CATAAAACTCGCTATTGAATTCGTTCGCCATTCTATTCGTTAAGTGAAGA
ATATAGATTAAATAAAACCAAGACTTGTTTCCGTCTACTTTGGATCGGGG
GGGGGGGCGCTTAGGCAAAATTGGGTACGGGGACGTGGCGCTGGTCAGGG
TCTCTTTTTATGTCCCGAAGATATCTGACTTTTCACTGACCATTCACGTT
TCAATTTATTTATCCATATTTATTTTACACTTCTCTAGGTTTGTACTCGA
CATGAATCTTTGGAAGTCAAAAATATGTTGAATACACTGCTAAAGGAACC
GAATACTATAGGTCATAGTCCTAAACATCCTTTCGTTGTTGTGGAAGGTC
TTGATGGTACAGGTAACTTGTCTACTGAAAATCCAATTTTCGTGGAACTT
ATTTTTGCGTTTTTTTTTTGTGTCTAACTATTTTTACTATAAATTCCGAA
AACTAGCTGATTTTTTTATCTTGGTCTTATGTCCCATGAATTGAAATGTA
GAAAAATACCGATGGAAGACTTTATTTTGCAGTAGCTTGCAAACAATGAT
TTGTGCTTCAACTCTACAGGGAAATCCACCATGACACAGAATTTGGGTAA
ATTTCTGGGAGCTGAAATTCTCGGCACACCGCCAGCGTCGATCAAGCATA
TACGTAAATATTTTGACGTCTTTCCTGAATTATGCCGCCGTTCTTTTTAC
GCTTACGGGAATTACGTAGCTGCTGAAGAAATCATACAAATTCTACAATC
ACGTCCAGTCGTTCTTGACAGGTTTGTTATTTAAAATATCGAATTTAGAT
TTGATATACCTCTGATGATTAATGTTGCTTCGTTGGCATTTTAAAATTCC
TTAAACATAATAAATTACTTGGACTTTTATAGGGATGAGCTGATGCTCAG
ATTTCCGATAAAGAAATCTATAAATAAAACAAATTTAGACTTTCGTTCGA
TATCGAGTACCGGACTTAAGTATGATCCGGTATTAATTTGTAGCTGAATC
AATAATGGCTGTAATTTGATGGACCTAGAACTGTAGATGTCCGTGTCGTG
CTCGTTGAAAAGATATTTTGAGTGAAATGTTATCAACTAGAAATGGGCTC
TTCCAGAAAAAAATAGAATATGGGGAGGAGGTTGAGGATATACGTTTTTT
TGGAAATTTACCCCCCGGACATTGTGACTTCTAACCCCCTGGACAAGCAT
CAGTTGACCCCCTTGACATTCAAAATTACCCTCATACAGAGCAAAGCTAC
CAAAAAACAGAGCAAGTTTACGCCCCTGGACAAGGCCAATTTATAGATTT
TTACTACCCCAGGACACTATATCCTCCACATTTTTTGGAAGAGCCCAATG
GATGAAATTTAAATTAAAAATAAAAAGCAATTGTGGACATTTTGGTGAAT
TTCTCATCGCATAATCGAATCTAACAACTAACAATTATAGTGTAAAAAGA
TATTTTAAACTAACCCAAACGTATCACGTATAATATATGGTAACTTCTTA
TGAAAAATGTAATAACATATTACAAGAAAAAATAACATCAGACCAAAAAT
GATATTAGGAAAATATGATTTTACAACGTACCAATCAAGATTTTCTTTCT
TCTTATAAAGGGCGTAACCACAGCCAACCAATATGAACATGTAAAAGAAA
AATAGATAAGTGGTCCTGGAAATGCCTCGTCGTAGAGGAGGGCNAAAAGA
AAAATAGATAAGTGGTCCTGGAAATGTCTCGTCGTGGAGGAGGGATATTT
TGAAGAGTTTTTATGCTAGTTATTATTGATTGGTGCAGCATGTTCAGTTG
AGCAAGAATCATTTCCATATCCACTTCAGTATATTCAATACTGGGGTCCA
ATGCCCTAATTGCGTTTTCTCTAATAAGTCCATCAGGGGATGTCAAATTT
TTTAATTTGTCTCTAAGTTTCTTACACACATGTGCGCTATTTGGAGCATC
TAAGTATTTGACGTGCAATGGAACAATCCATGAAGGTCCGTACTGAGCAT
ACATACGTTCTTTAGCATCTTTATGGCAAGCAAGTTTCGCCGAGTCCATA
TAACAAGAGCACATGTCCCTCATTGTTGGTCTTGCACCTTCATCTGTCAT
CATCTCGTCTGCAATCCATTCATTGAAAACCATATGAACTTGTGGACATC
CTTTCACTGTCCAATGGACTTCAGCATATATGACATCTGGTGTTTGCCAC
ATTGAAATGCCTTTAAAAACTTTACGTAACTCGTCGTAAAGTATTCCTTG
ANTGACATCTGGTGTTTGCCACATTGAAATACCTTTAAAAACTTTACGTA
ACTCGGCGTAAAGTATTCCTTGTGGGATATCAACGTACATATCTACGTCT
CCATCTGATGATAGACAAGTACTCTCTCTTAACACACCAAGCTCTGTTCC
ACTTCTAGGGAAATAGATGGCTCCCATTCTATCCAACTGTTGCCATAACT
GCTGGTGGATTTTCGAACATCTGGTTGATTTTTTGCGCTCTTGTCCGAAA
GTGCAATTCGGACGTATGAAATCAGGACCTGGTTTAATAGCTGGTCTCCA
CTTCAACCTTCGGTGGGGATAATCCGTATAAGTGTTTCTAGCGTTCGCAT
GCCACCATCTATGATAAAAGGAGAAAGAAACTTTTGCTTGACTTCACGCC
TTGTTATAGGAGTACGAGACTTTGGCATTTGCCAACTCTTAGGTGTATTG
AGAGATGCCGGGTATATATGTGTAAGGATCGGGTTTTTACCATCCAAAGT
CTACTTCTAGTGGCCCTTCATTGAAACTATTCCTGAGCTGTCTAAAAGCT
TTTGAATTTTTCGGAGCATGCCACTTAAAATATATGTTATTATTATTGTT
GTTATTATTACTTAAGTTTTAACTGTTTATTATTTTTGATAAGGAAGATA
GGAAAAGGATTTCTTTATATGGTTGTTGAAATGAAGTTGAGACTGGTTAG
ATTATATAAGAATTAAATTATTATTAACCCTTTGGTGATTACCCAATGGT
AACTTTGAATTTGAAATTGTCATTATTGGTCCCATAAGAGAGATAGAACT
TATTACGTATAAAACGAGGGAGGTTCGAGCTTTTAAGGGGGTCCTTTAAA
AATATAAATGTGGGTGAAACCCTCTACAATTCTTCCGTGGTTTGATAGAA
AACATTTTCAACTGTGATGTGACTTTTCAGATCTAGTAGCTCTAGAGTTA
CAATTAAAGTTAGACTTTTATCTTTTTAGTAAAGCAAATACCTAGTTTAC
TGATATTTAGCTTGGTCTCAGTAGGTCGGAAGTTGCTAAAGGTTTAAAAA
TTTTATGAGTCTCGGGTATATACAATTGTCATGAACCTACCTCAAACATT
TGTTAAACCATCTACCCCTGACTACACCTGTCAAATTAACGTTTTGTACA
TGATGTAAAAATCTTGGGTACCATTTCTCTTTTTTCACTCTGTTATTATT
AAAATAACGTGGATAAGGACAATCTCCATTCCAGTTTTCTTCGTAGTAAT
CATCTGATTGGAACTCTCTACTGCTGTTGTATTTTTGTTGCTTTCTGTTA
AGAGGTTTTAACTCATTGTTGATATTTTCAGTTGTAGGTGAGGCTCTGGG
TTTCTCAACTACCTTTCTCGTGCTATGCAGAATCACCAAAGATAGGAGTA
AGACAACACCTACAATTAAGAAAATGTGCAATTTCCCTTTCATTTCTTAT
TTTCCTCGATTAATCAATTCCTTTTTTCTCAGATACTGTCTAACAAATTT
ATCAGCATCCAGTATAATATAGTATAATATATAATATAAATTATTCATTT
AGCATTCACTTGAAAGTATTCGGTATTAAATACTGAATACTTTCAAGTGA
ATGCTAAATATAAGTTTTGTAATATACCTAAAGGGAAGAAATTTTGCGGT
TCACAGCTCATCTACTAAGATTCGGAAGTTTCGCGGAATTTTATTTCGCG
GTTGAGAGGATTTTTTGTTTAAAATATAGCCTATTTTGCCTTGAAAAGAC
CAATTTTATAGGTTATTTTTTTAATCATGAGAATATTCGTGTTTCGCGGA
ATTTAATTTCGCGGATTTGTCGAAAAACTGCGCAATTAAATTCTGCGAAA
ATTTGTTTCCGCAAAAATCTTCCCTTAAGGTACTAACTACTCTTAAAATT
GTAAGAGATTTTTACTTTATTTAATTTAAGTTTTTTAAAGGAAGCTTATC
AGCACTAAATATTTAATCCCTGGGTTAAACCCATCATGTGCTTTATTTTC
CGTTTTTTTTCAAACAATATTAATACATTGTCGAAGCGACTAATTACCTT
TTACCGCGTTTGTTACTATCTTTTTCAAAATACATGTAATATAAAACTTG
CAAAGTTGGGTATTGTACCTTCAGAGCGAAGTCAAATTAATTCTCTTTCT
TTGGGGTNAGAGCGAAGTCAAATTAATTCTCTTTTTTTGGGGTTAACCTA
CTTAAAGTATATAAGAAAATTGTTACTATCTTTTTCCTACCTACTTAAAG
CCTACCTACTTAAAGTATACCTATACCTACCTACTTAAAGTATATAAGAA
AATAAAGTTAAGTACAGTCTTGTTTTGTAAGCATAACGTTCATAAGTGCA
CTATGTGTGAAAATTAGCAAAAAATAAGCATAGTGCTAAAAGCATACCAT
TCAAATTTTGTTTTGAAAATGAGATCAATGAGATAAAAATATCAGATATC
AGCCAAAATTGACCATGTTTTGACAACACTTTCATCTGCATAAAATGAAC
AAGCATAATTTGAGGATGAAAATTAAATTGAAACATGAAATCTTTGAAGC
TACCCAAAACTTTATACGAACCAAAAGCACGCCTATCGTTTCAGCCCGTT
GACAGCTTTCTGTAAATTCCTTTATGAATTCCACCTGTCTTGCTTTATGT
TAGTTTAGAGACTTTCTTCGTTAACTCGCTCATTCAATTTTTTTCTGATT
TTATATACAAGAATGTTTAGCGGTAAACCCTCAAGTGTGGTGCAGCCCAA
ATTTTTAAAACCATATTTTTGACTGATTTCACCTACAACGGTTAAAGAGT
TTTACAACCTGACCCTAGTCAATTTTTTTTGGCCCAGCGCTAAGCGGTAG
GCCTTTCATTTGCAACTTTCTGTCCGTCTGTGGTGGATTCCGTCTGTGTG
TCCGTTTTGGTAGAAACGGCGATTAAAACCAGTAACACGCTTTTTAATTT
TGCTTTCTGGAGAGGGAAAAGCTTGCTAAAGTCGGATATAAAAGATATAT
TTTCTGATTCTGCACTCCCTCAAAACAATTTTCAAAACAAAACAAGATGG
CGGTCGAAGCGAGGAGGTTGATTCATACTTTCTTGAACATTTTCTTTGCT
TTAGTGGTCAAGAGACGTTCAAACGAAAGAAATTTTGTGATTTTTCTTTA
TAAACCTTTTTCGACATTATGCCATATCTTATAGTCTTTGCTCAAGTTTT
CATGAAGTTTTATGAGTGAAAATCCTACCTTAAATCACTTTCATTTTTAG
TTTCTTATTTTCAAAAAGACTTTATTTTTAGGAAATAATGGCTTCTGATA
TAGAAATAAATAAATTGAAATGCTGCTCATGTGTAAATTTGAATCAGATT
GGAACTTTTTTCTTGATGCTACACAAGAAAACAGTCACTTCTGGATCTGT
CGCTGTTAACTTTTAACAACGGTCAGTGGTATGGTGAGACGTGGTATGAT
TTTCAAACTCGACACATAATTATTTCAAGTAAACTGATTCTGGAATTTGT
TAATGGACACTAAAATGGGGATCATGTGTAAATTTGAACAAGATTGGAAC
TTTTTCAATGATGCTACGCGTGAAAATGGTTTTTTCTGGATCTGTCTCGT
TTGATGATTGGTGGCTTGATTTTTCAAACTCGACACAGAATTATTTCAAA
TAAGCCGATTATGGAATATGTTAATGGAGACTAAAATGCAGCTCTTGTGT
AAATTTGAACAAGATTGGGACTTATTTATTTTATACTTTTCTAGGTTTGT
ACTCGACATGAATCTTTGGAAGTCAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_042263XLOC_042263Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00067697-exon-scaffold_472-1575043694:380468..380693TCONS_00067697-exon-scaffold_472-1575043694:380468..380693Clytia hemisphaericaexon
TCONS_00067697-exon-scaffold_472-1575043694:380161..380298TCONS_00067697-exon-scaffold_472-1575043694:380161..380298Clytia hemisphaericaexon
TCONS_00067697-exon-scaffold_472-1575043694:379637..379755TCONS_00067697-exon-scaffold_472-1575043694:379637..379755Clytia hemisphaericaexon
TCONS_00067697-exon-scaffold_472-1575043694:378961..379156TCONS_00067697-exon-scaffold_472-1575043694:378961..379156Clytia hemisphaericaexon
TCONS_00067697-exon-scaffold_472-1575043694:378395..378628TCONS_00067697-exon-scaffold_472-1575043694:378395..378628Clytia hemisphaericaexon
TCONS_00067697-exon-scaffold_472-1575043694:376837..377423TCONS_00067697-exon-scaffold_472-1575043694:376837..377423Clytia hemisphaericaexon
TCONS_00067697-exon-scaffold_472-1575043694:369468..369499TCONS_00067697-exon-scaffold_472-1575043694:369468..369499Clytia hemisphaericaexon
TCONS_00067697-exon-scaffold_472-1510915933:380468..380693TCONS_00067697-exon-scaffold_472-1510915933:380468..380693Clytia hemisphaericaexon
TCONS_00067697-exon-scaffold_472-1510915933:380161..380298TCONS_00067697-exon-scaffold_472-1510915933:380161..380298Clytia hemisphaericaexon
TCONS_00067697-exon-scaffold_472-1510915933:379637..379755TCONS_00067697-exon-scaffold_472-1510915933:379637..379755Clytia hemisphaericaexon
TCONS_00067697-exon-scaffold_472-1510915933:378961..379156TCONS_00067697-exon-scaffold_472-1510915933:378961..379156Clytia hemisphaericaexon
TCONS_00067697-exon-scaffold_472-1510915933:378395..378628TCONS_00067697-exon-scaffold_472-1510915933:378395..378628Clytia hemisphaericaexon
TCONS_00067697-exon-scaffold_472-1510915933:376837..377423TCONS_00067697-exon-scaffold_472-1510915933:376837..377423Clytia hemisphaericaexon
TCONS_00067697-exon-scaffold_472-1510915933:369468..369499TCONS_00067697-exon-scaffold_472-1510915933:369468..369499Clytia hemisphaericaexon
TCONS_00067697-exon-scaffold_472-1491911889:380468..380693TCONS_00067697-exon-scaffold_472-1491911889:380468..380693Clytia hemisphaericaexon
TCONS_00067697-exon-scaffold_472-1491911889:380161..380298TCONS_00067697-exon-scaffold_472-1491911889:380161..380298Clytia hemisphaericaexon
TCONS_00067697-exon-scaffold_472-1491911889:379637..379755TCONS_00067697-exon-scaffold_472-1491911889:379637..379755Clytia hemisphaericaexon
TCONS_00067697-exon-scaffold_472-1491911889:378961..379156TCONS_00067697-exon-scaffold_472-1491911889:378961..379156Clytia hemisphaericaexon
TCONS_00067697-exon-scaffold_472-1491911889:378395..378628TCONS_00067697-exon-scaffold_472-1491911889:378395..378628Clytia hemisphaericaexon
TCONS_00067697-exon-scaffold_472-1491911889:376837..377423TCONS_00067697-exon-scaffold_472-1491911889:376837..377423Clytia hemisphaericaexon
TCONS_00067697-exon-scaffold_472-1491911889:369468..369499TCONS_00067697-exon-scaffold_472-1491911889:369468..369499Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_472supercontigscaffold_472:369468..380693 -
Expression

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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.79298	1.14159	0.397574	0.030692	2.26257	2.0423	0.715458	2.3584	2.62206e-10	0	0	0.0627363	2.04642e-09	0	0	5.80215e-08	4.52784e-08	0.37475	0	0	0.703301	1.46976	0.450664	3.27523	0	1.63837	0.376591	3.16705	1.55365	1.29177
Blast
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BLAST of TCONS_00067697 vs. Swiss-Prot (Human)
Match: IF2M (Translation initiation factor IF-2, mitochondrial OS=Homo sapiens GN=MTIF2 PE=1 SV=2)

HSP 1 Score: 131.339 bits (329), Expect = 2.446e-32
Identity = 86/241 (35.68%), Postives = 142/241 (58.92%), Query Frame = 1 
Query:  124 RNKRIPLRVSLRAEAATGKVQQEEKSKTIDLIIKADVSGSLEAIVNILSRYHST-DITLNVLHASVGSVNENDLKMLQTSEDSIVYAFNVDVTKSLMTQAEKLDVPVKQFDIIYXXXXXXXXXXXNTLPMRSEEHIIGEAEVLKVFKLTGSRKNV-AAGCRVKEGFLDNSNSEHLWKVIRDHQPVYEAGIKSLKRGKEDIALAKKMTECGVTL--DNFEDYREGDKILCVRVDRIKQVVDW 834
            R ++IPL+          K ++E  S  + +IIK DV GS+EAI+NI+  Y ++ +  L ++H  VG V+ ND+ + +T  D ++Y FNV+    +   A K  V +K   IIY+L++DL+E+L + LP   EEH +GEA +L  F +T  +K V  AGCRV++G L+       +K+ R+   +++  + SLK  K+DI++ K   +CG++L  DN E ++ GD+I+C    +I+    W
Sbjct:  497 RKEQIPLK---------PKEKRERDSNVLSVIIKGDVDGSVEAILNIIDTYDASHECELELVHFGVGDVSANDVNLAETF-DGVIYGFNVNAGNVIQQSAAKKGVKIKLHKIIYRLVEDLQEELSSRLPCAVEEHPVGEASILATFSVTEGKKKVPVAGCRVQKGQLEKQKK---FKLTRNGHVIWKGSLTSLKHHKDDISIVKTGMDCGLSLDEDNME-FQVGDRIVCYEEKQIQAKTSW 723
The following BLAST results are available for this feature:
BLAST of TCONS_00067697 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
IF2M2.446e-3235.68Translation initiation factor IF-2, mitochondrial ... [more]
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