TCONS_00067663 (transcript) - C. hemisphaerica

Overview
NameTCONS_00067663
Unique NameTCONS_00067663
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1094

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00067663 ID=TCONS_00067663|Name=TCONS_00067663|organism=Clytia hemisphaerica|type=transcript|length=1094bp
GTTTTAGCATGTGAAGTTCATTCTGATGTTTTAAAGTTCTAGAGAAATTA
GCCATGGAATGGAGTAAAGAAAAGGAGACAAAATATAATGGAACCTAATG
AATACAAACTACATTTCTTAAACATTGAAGTCTTCAAAGATCCTAAACGA
GAATTAGCTTTGATATTCACTATACAGTATGCATTAGAGGCATTCAATCG
GATACGTGATCACGAATCTAGAGTCAATTACCATTGTTTATTATTCGGTA
AAATCTCCGAGAAAGATAGAGTGTTCACAGAAGGATCATTACCGCTTTGT
TTTTTGATCGGTGCAACGCAAGGTTTTGTCATTTTGTTCTCCTTATATCT
GTGGTATGAGATACGCAAGAATCGTTCAGTCTTTTGGGCGACAACAGTTC
GGAAAAGGATATGCTGGGGAATCTTTTTAACATACATGGCTGCATTATAT
ACATTAGCGCATCAAGGTCTACGTGCTGTTTGTAACTCACTGTCTGCTCC
AAGcTGTCGTGACGGTGTTGTGTTATATATCGACTTCAAAGTGTTCAAAC
CAAAATACCTGAATGCATGGTCTTTCTTCTCTCTATGGAACACCATACTg
GAAAGtgcacaaaaaagttttatatcgCTCGCCATCTTTGCCTTTCTTAA
CATTTCAAAGACACCACTGGAAGAACGGCTACAGATGATGACGCGGAAAG
TGAGAGAATATTTATGACAAGATTCCTGTCTATCTGTCACCTGCTGTCAC
AACAAACAATAGAAAGCCACAACAATAGAAAGTTGACTGAATGTGAACAC
AACCAACTAtaattgaaacttttgaaagcgGTATGGCAGAAATATTATTT
AttctttcatttaattttttaataattcGACTAAGCAACCTATGAGGGAT
GAGAATTTTACGGgaaaaatgttctcaattttTCGGAAACATCGATATTT
AACCACAATTTTGAATGTTAACTATTGTTCCTTTTTTCCTACAGCGAAGG
GGTTTTTATTATATCTCAAGAATGTAAGGTTCTTACTGGGAAAACTTCAT
TAAGTATTTCGCGACATTCGTGAAAAAtagaattaaaatatatt
Run BLAST on NCBI

protein sequence of TCONS_00067663-protein

>TCONS_00067663-protein ID=TCONS_00067663-protein|Name=TCONS_00067663-protein|organism=Clytia hemisphaerica|type=polypeptide|length=209bp
MEPNEYKLHFLNIEVFKDPKRELALIFTIQYALEAFNRIRDHESRVNYHC
LLFGKISEKDRVFTEGSLPLCFLIGATQGFVILFSLYLWYEIRKNRSVFW
ATTVRKRICWGIFLTYMAALYTLAHQGLRAVCNSLSAPSCRDGVVLYIDF
KVFKPKYLNAWSFFSLWNTILESAQKSFISLAIFAFLNISKTPLEERLQM
MTRKVREYL
Run BLAST on NCBI

transcript from alignment at scaffold_472:334681..344010+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00067663 ID=TCONS_00067663|Name=TCONS_00067663|organism=Clytia hemisphaerica|type=transcript|length=9330bp|location=Sequence derived from alignment at scaffold_472:334681..344010+ (Clytia hemisphaerica)
GTTTTAGCATGTGAAGTTCATTCTGATGTTTTAAAGTTCTAGAGAAATTA GCCATGGAATGGAGTAAAGAAAAGGtgatttgtttatattttttatgttt gttcGTTTTACcaacaaaaattatgaaaagttATTTGTAGTCACCCTCAA AATGTTttaattctaaaatattttgaaggaaTAGGACCGAAACTAACAAa gtttataaattatttttcgaaCTGCCGGCCATAAATGATTTTGTAAAGTG TTTGTGAGTACTTTTAGATTGTCGTTTAAACGAAATAAAGGATTTTATCA TCGTCGTGTCAAGGTCTTAAGTATTGTAATGGGATGAGTGAGAAAAGCGA ATAAAAACGTTGCTCCTTTTTCTTGATACCATCTAGCTTTATAATTTCAG TCTAAATATTAGtctttgaaaatagaaaatttgtgtTATTTATGTGGGTT ATATATATAACATTCTTTGAtatctttctttattttactGTTAGAGTTCC CCCTGTCTGTTGTGCatatcttttgattgtttttaattttcttggACATT CATTTTTTATAGTAATTTACACTCTTGATATAGAATGTGGGTCTGATGGT CTGTTGATTAAAATTTCCATCCCTTTTTTTCTGAGTATCTTATTCTTTAT AATTTCTcattatttctcttttttcaatttgttttcttttgttgttcTCT TCATTCATATTTTTGTTCAGAACCTTGTATTAAAATCTTTCTTGGACTCA AAtctccattttttcaaaacaaattgaaTTCAATCTTGTacagaattttt aaattttgataggttCGTTCTTTTAGTTGTATCCTTTAGGGAAGATTCAT TTCTGAGATAATCTACTTCAAGACAGAGGTATACATTAAAAGTTGAAGTT TTAAAAGCTTTAAAGGCCATAATCCCTGAGGACTTCTGTCTTCTGTTTAC TGATATTTCAAATGATTTTGGTATGgtatttttggtaattttttgttTGA TATTGTTCGAATAGTTGAAaacattttgcttgtttagtGGGTAAGTTTTA AACAAAGCCTTTTAAACTTTCTGTGAGCACTTACTGTAAATTTCTAGTGT TAAGGGGAGACACTCGTCGTTGttatcattgaaaaaaaattggaaggaaG ATAAAGGTCTTAGCTATTACTGCTGCCTTCTGACAAGTTTCTACCTCTAA ATTTTCCTGCAAAATAGTCCctgatcaaaatttaaaatgaaagttcAAAA TGAGTAAATATGAGAtggtttttttaaattgtcaataTAATAACGCTTTT ACATTGTCGTAAGCCGTGTGTAAATACGGGCTTAGCTATCTGGGCTAGTT TCTTTTATCCTTAAACATAGAgtaaaaaattggggaaaatttttctacac TAACATTCTACTTTCAATTTATATTTATAGTacaatctttttttcaaagt aGCGTTATCTATATTTATCAAGAAAACCTTACACTAATGTgtagattttt ttatgaatgaaCATATTTAAGGAAACTttcttttgctgaaaaaaatGACA CATGGCTTGTGGTTGTTAAAACTCCATCCTAAGTTCCTTTTTTACGAATC CTCGTATGAATtggaatgtttttattttctgattTATCATTAGCTTTTAT TTCTTGGAagataccttaagtggataaattttggcgtggatttaattcgg cgattggccaaaatacgatttttggcggggatttaatttggcgatagatc aatttcataaaatttggcgAGGATCTAATTTGGCGAagtggaaattttgt cacactgaaatgggtgaaaattactcaaaaatatactaaaaagttgtgat tttcacataattctctttttgtcaaatttggcggggatttaaattggcga attgccgaatttggaaattttggcgaggatttttaatttggcgaattttg gccaaattcgccaaattcgccaaatttaatccccgccaaaatttatccac ttaagacaaaaattttgattgggaCATGGAATCACATCGATTTCTCCTTG AGGCAAAGCATTAGTGAAAAACatgtttatttttatcattttctacAAAA TTTTGGCATAAAGTATAAGAACCTGGATCTAGCAAAGAAGTTTTGAACAA CTACCTAGAAGATAGTAACTTATCTTCGTTTTTTATTTATCccctttttt caatatttgaaaaGTTACCTTACTTTTAagattttggttatttttcgAGT TGAATTTTATTTCCAATTAGGTATAAAGTTTTATCATACCGTGAACTTAC TTGACCATGAAAATTAAGAGAATCTGAGAATGCCTATGTGTACGTCTGTG AGTCCAATATACTTTTCAGGGAAGCCAGGAAACaagatttggctaaaatt tagCAAGCCTGTTCCTTGAGTGAATATCTtgaggtgttttttttcattat ttgaaaattttgatttttggtgccATGGATTTAGCCTGGAGACTTTAACG AAGGTGGAATTTGGCTGGAATTTGGCACTCTTATTTTTAAGggaatactc tcgggtactttatagccggggggattggaataaacGGGgaaggggggttg gaaaaaatctctaaacttaataagcgggggggggctggaataaaaatgtc ctgggtggaaaatttttgaaaaggaggctaatacagcataATTGGGACAA AAAacggaactttcaaaaatattttcccaaaaattaattagcgggggggg ggctattaggtacccgagagtatgtgtgtgttttcacattttttacaaaa gaaaacatCAAGAATCTTTTGCTATAATTGATTTGCATGATTTAGATATT GAAGTTTAGCTAAGTTCGGTTAAGCACGTTCGACAGTACAATGAACTGGA CCCTAAAATTGAGGATAttgtaaaattcaaaatgttcaaatttttaGGAC AGACTCTATTAACACATTCTTATTGTTTTTAGGAGACAAAATATAATGGA ACCTAATGAATACAAACTACATTTCTTAAACATTGAAGTCTTCAAAGATC CTAAACGAGAATTAGCTTTGATATTCACTATACAGTATGCATTAGAGGCA TTCAATCGGATACGTGATCACGAATCTAGAGTCAATTACCATTGTTTATT ATTCGGTAAAATCTCCGAGAAAGATAGAGTGTTCACAGAAGGATCATTAC CGCTTTGTTTTTTGATCGGTGCAACGCAAGGTTTTGTCATTTTGTTCTCC TTATATCTGTGGTATGAGATACGCAAGAATCGTTCAGTCTTTTGGTAAGA ACCAACAATTTTGTTTTATAGAATGAAAGCATGTCCCCCGAAAAAGACAT TTTGCTTCATTGATACTCAAAGAAAGACACACAATTTTGAGTATCAAGGA ACCAAGTTGTCTTTTTTCGGACttgttttggtttttattttcccTGATAT TATCAGCTGgttatttctttgttttatggtaCCTTTTGAACTAAATGTCG CGATTTTTTGAGCTCGCCAAAGTTTATACGCCTAAAGTTAGTTATTTCAT CGAAGGTTACAGCCTCTATAAGGTAGCTCGTTGGAGTCCAAAAGCGCCGT ATTTTTGGGGAGCGTATAACTTTCACTTCTAAGCTACAAGATTTAGcaga aatatttttctgaatcGAAAGCTGTTGCGAGTTGTTCAATAGTTTCGCAT ATGTAGTTTGTGTACCTGAAAAGCATATACGATACTACTAGATTTTTTGT CGATACTCAATTTTAagataattttcttttcaattttgtaCAGGGCGACA ACAGTTCGGAAAAGGATATGCTGGGGAATCTTTTTAACATACATGGCTGC ATTATATACATTAGCGCATCAAGGTCTACGTGCTGTTTGTAACTCACTGT CTGCTCCAAGGTAATCTTTTAACCTCCATCAATATTTGTGAACAAAGTTT CTTTAAATCTTCAACCTCATCCCTGTGGGCCATTTTTTAGATGTTTATGG CGTGGATTTTCGTACTTTTCATCCCGAAAAACTTATCTCATCTATACATA AAGTATGTTCAAATCGGGGAGACCGACCTTTTTTCGGATGGAGTGGCGGG ATAgactttttcatgaattacgtaACGTTTAACCTCTGACTCGTCTTGAA AcaattaccaaggtgattatgtcccttgagacaatCATTTTTAACTAAAA AGAGTGCACCTCTGAGAAATATCGGTCGAGGATAAGTTGTCACAGCATTA CTTCGAAAACTTGTGGCgcaatttatgaaaatgtcaaTTCGACTAAAAtc tgaatttcgaaaataagGTCGACTGTCAGTGATAAATGAGGTTAATTTAG TCTCGAAATAcgtaatttagaaaaattatcgGTTTGAATTTCGGAAAGAG CGGAagaaagtctaattttctaattttttttttgacgaaatCTATTATTT CGAAGAAGATTTCAATGACGGACAGAAATGATATAGTTTTTAACAAGTga cattttccttttttagcTGTCGTGACGGTGTTGTGTTATATATCGACTTC AAAGTGTTCAAACCAAAATACCTGAATGCATGGTCTTTCTTCTCTCTATG GAACACCATACTggtaatttattcaaaattttatttttttcttcgtttgg ggataccttaagggaactaattttcgcggtgcGAGGGTACTAATTTGGCg catttttcaattaatttcgcggatgactcAAATTTTTAGTCCGCATAAGT GTTCCTGTCGCATACCAGACAAATATTTCATACCAGGACAGTATCTGCCA actgttatattatgctgatataagcaaaaaatgtttttcttttccgcttt ctgaccaatcttgctccacatccgttaaaaagaagaattatgggcctaaa aaaacttttatttcttAGATATTTTCCTgcaaactgaaaataaaaatgat gaaatctttGTTCACAAGGAAATCTTTGTTCAAAATATACTATTTTTTAT TGTGTctaaattttttatataagtAATTCTTCATTTATCTTACCCtttgg aaaaaactttgacaaattatttttgaacctaccttgttaatttttattat tttaactaTTTTCAGGAAAGtgcacaaaaaagttttatatcgCTCGCCAT CTTTGCCTTTCTTAACATTTCAAAGACACCACTGGAAGAACGGCTACAGA TGGTATTTGAATCTTCTTCTAATTTCTTGATTAATTGTTTCTGTTCCAAT AGTACCAAcacaaaaatttccaatttaGAATGTTACATTTAGGATAGGCG AATTTAATGAATTTGATcttgtttttcgaaaaatgacaaaatattttatc ctttgtagttcaaaaattgttttaaaatttatgactatttttttagatat tctATGTTAAATAAGTTTTCAAGGGATAGTCAGATTTTGTTATTTGGTCA attcaaaacttgaaaatattcaaaaatatttcaaattttcaaaatttcct aaaaaacaATAGGTACTAGACCTTCTTTTACCGAAGGTACTTTTAAAACA CTATCTGGTTATCCCTTGAAtaatcaatttttaattttttgttccaGTCA GTTACTGTATGTCTGTTAAGTGTATTTGGAAAAATAACAGCCGTACTAAA ACAGAATAGGAACATGTTTACCAACCAAAATGCCACGGGAATAAATACCT TAATTTGATTTTGCGGTTATGGATATTTTATATATCACACATTTGGGGAA TGAGTACAATAACGGAATTAGAAAAAGGTGAACCGGGTGAACCCAGTGAC GTAATTCGTGGCCAGGCAAGCCCGAAGTGGGGATCGCAGATCTTGGTTAA ACCATTTCATTGATTATGCTGGAAGGTGACAAAGGGAGAAGCAAACctaa ttgaaaaatcaaaacattttcagAGATTGGGGATGTTAGTTACTTTCAGA AACACATGCATTCCCTATGTCCCCTTACTCGGAAATTACATTGGTGGGAA TAGAACGTAATTAGATATTCGACTTAGAAGCCAAAATTCGAGCATTATCC CAAAGATCGAAATAAGTGTCAAAAGGAAAGGGATGGTCGAAGGATTTCAA ATTTTACTGGGTCgagaaaaacaaatcaaaatgaaaaataagtcggCAAG GATCATTCTCTTTTTCATGGAAcaagataataaaaaaataaacgaaacat agtcaatcaaaaatgaaacgAATGCTGAAAGCTCGAAACTTTATACCCGA CGGTAATCAATCAAATCACAAAAGCTGGGCAAGGCAGTATGAGTTACAAC AtaattcaaacaataaaactTACAGATCTTACCTTTTCACCATAGGCGAT TTTAGACAGCAAGACAGGAGccaattcaaaatcaaaataaaccagccgag gctggaaggtcagccaatagagcttagctagatagctttaataagtgggt taacagatgtaagagatgcactGAANTCCTCTTCACTGTGTgggtactat atggatggcccctccagtctgggtaaataaattttgtagtttagtaccgt caagttacacaacatgcacacaaccatcttgcagactttgctggtcgcaa atgataatcgaaagcaaaacttaaaattcataactatgcggggaagctca tttttcccccgttttgctttaaactcgcttttgattggtctatgaatttg ggcgaatGATTTACCGCCTttgcggaataaacacacaaccataataaata aattcaacggggcagcggtgtagcaattaatttcaactggagGTCCtatc ttctgtgccaagcactggcagtgttttttaaactttaaaacaatgttaaa tgaagaccagattgatctgtttgttatggctgtgcaagttgtgacgagag tgtgcatgttgtgtaacttgacggcagcccgctttctgcaagtctgataa gagatatctataaactgttatcgccattcattccattccatcattctgTC AAAATGTGCGCCAAGCTTAGAAAAggtcagaaaaacacaatctgcgtccg gaactgcgtgaaaaatagtctgatcaatttcaacaagaactgtatatatt aatattaatataaatgatcaaattccaaagNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNacccaaaaagt taacccgatcggaagaaagtttagaaatcaaagtgagatcggaaaaccgg attttttttttgccgtcttatgatgatgatggaggaactggaagaaaatt ttacctatttgaatgctcagcttaggctgaccaattattttcatttcact TTTACTTGCGCTATCTACCTTCCATACAAAACTTGCTCCATCTATTTTGA TGAAGATCTACtaattcaaaatatcattatAAATTCAACTTCCACAAGAA ACAACATAAAAAAATAGTGCCACATCTTTATCGATTTATTGAGCTTCTTC GTTGTGTCGTCTTTGTTCCTCTTCTCCCTCTTTCTTCCATCAAGGTCAAT TCGAAatggaaacaattttttgacAGTGTAATGTACCCTGACCGTCAAAG CTAGGTTCACTGGGTTCACCTTGATTCAACCGGTTCACCAGATGGGTTCA CTCGGTTCACCTGTTTTCTAATTACGGTACAATAATtcaaatttggcgga tggcgggaACTTCCCCCCAAAACTTTCCTTAAGGTATTGACTTGACTGAA GACTTGTTGAAGTTGATGTTTTCCGATTTTCCAAATCAAACctagcaaaa attttatcactCCCTTCCTCTAGATGACGCGGAAAGTGAGAGAATATTTA TGACAAGATTCCTGTCTATCTGTCACCTGCTGTCACAACAAACAATAGAA AGCCACAACAATAGAAAGTTGACTGAATGTGAACACAACCAACTAtaatt gaaacttttgaaagcgGTATGGCAGAAATATTATTTAttctttcatttaa ttttttaataattcGACTAAGCAACCTATGAGGGATGAGAATTTTACGGg aaaaatgttctcaattttTCGGAAACATCGATATTTAACCACAATTTTGA ATGTTAACTATTGTTCCTTTTTTCCTACAGCGAAGGGGTTTTTATTATAT CTCAAGAATGTAAGGTTCTTACTGGGAAAACTTCATTAAGTATTTCGCGA CATTCGTGAAAAAtagaattaaaatatatt

Coding sequence (CDS) from alignment at scaffold_472:334681..344010+

>TCONS_00067663 ID=TCONS_00067663|Name=TCONS_00067663|organism=Clytia hemisphaerica|type=CDS|length=3150bp|location=Sequence derived from alignment at scaffold_472:334681..344010+ (Clytia hemisphaerica)
ATGGAACCTAATGAATACAAACTACATTTCTTAAACATTGAAGTCTTCAA
AGATCCTAAACGAGAATTAGCTTTGATATTCACTATACAGTATGCATTAG
AGGCATTCAATCGGATACGTGATCACGAATCTAGAGTCAATTACCATTGT
TTATTATTCGGTAAAATCTCCGAGAAAGATAGAGTGTTCACAGAAGGATC
ATTACCGCTTTGTTTTTTGATCGGTGCAACGCAAGGTTTTGTCATTTTGT
TCTCCTTATATCTGTGGTATGAGATACGCAAGAATCGTTCAGTCTTTTGG
GCGACAACAGTTCGGAAAAGGATATGCTGGGGAATCTTTTTAACATACAT
GGCTGCATTATATACATTAGCGCATCAAGGTCTACGTGCTGTTTGTAACT
CACTGTCTGCTCCAAGcTGTCGTGACGGTGTTGTGTTATATATCGACTTC
AAAGTGTTCAAACCAAAATACCTGAATGCATGGTCTTTCTTCTCTCTATG
GAACACCATACTgGAAAGtgcacaaaaaagttttatatcgCTCGCCATCT
TTGCCTTTCTTAACATTTCAAAGACACCACTGGAAGAACGGCTACAGATG
ATGACGCGGAAAGTGAGAGAATATTTATGAATGGAACCTAATGAATACAA
ACTACATTTCTTAAACATTGAAGTCTTCAAAGATCCTAAACGAGAATTAG
CTTTGATATTCACTATACAGTATGCATTAGAGGCATTCAATCGGATACGT
GATCACGAATCTAGAGTCAATTACCATTGTTTATTATTCGGTAAAATCTC
CGAGAAAGATAGAGTGTTCACAGAAGGATCATTACCGCTTTGTTTTTTGA
TCGGTGCAACGCAAGGTTTTGTCATTTTGTTCTCCTTATATCTGTGGTAT
GAGATACGCAAGAATCGTTCAGTCTTTTGGGCGACAACAGTTCGGAAAAG
GATATGCTGGGGAATCTTTTTAACATACATGGCTGCATTATATACATTAG
CGCATCAAGGTCTACGTGCTGTTTGTAACTCACTGTCTGCTCCAAGcTGT
CGTGACGGTGTTGTGTTATATATCGACTTCAAAGTGTTCAAACCAAAATA
CCTGAATGCATGGTCTTTCTTCTCTCTATGGAACACCATACTgGAAAGtg
cacaaaaaagttttatatcgCTCGCCATCTTTGCCTTTCTTAACATTTCA
AAGACACCACTGGAAGAACGGCTACAGATGATGACGCGGAAAGTGAGAGA
ATATTTATGAATGGAACCTAATGAATACAAACTACATTTCTTAAACATTG
AAGTCTTCAAAGATCCTAAACGAGAATTAGCTTTGATATTCACTATACAG
TATGCATTAGAGGCATTCAATCGGATACGTGATCACGAATCTAGAGTCAA
TTACCATTGTTTATTATTCGGTAAAATCTCCGAGAAAGATAGAGTGTTCA
CAGAAGGATCATTACCGCTTTGTTTTTTGATCGGTGCAACGCAAGGTTTT
GTCATTTTGTTCTCCTTATATCTGTGGTATGAGATACGCAAGAATCGTTC
AGTCTTTTGGGCGACAACAGTTCGGAAAAGGATATGCTGGGGAATCTTTT
TAACATACATGGCTGCATTATATACATTAGCGCATCAAGGTCTACGTGCT
GTTTGTAACTCACTGTCTGCTCCAAGcTGTCGTGACGGTGTTGTGTTATA
TATCGACTTCAAAGTGTTCAAACCAAAATACCTGAATGCATGGTCTTTCT
TCTCTCTATGGAACACCATACTgGAAAGtgcacaaaaaagttttatatcg
CTCGCCATCTTTGCCTTTCTTAACATTTCAAAGACACCACTGGAAGAACG
GCTACAGATGATGACGCGGAAAGTGAGAGAATATTTATGAATGGAACCTA
ATGAATACAAACTACATTTCTTAAACATTGAAGTCTTCAAAGATCCTAAA
CGAGAATTAGCTTTGATATTCACTATACAGTATGCATTAGAGGCATTCAA
TCGGATACGTGATCACGAATCTAGAGTCAATTACCATTGTTTATTATTCG
GTAAAATCTCCGAGAAAGATAGAGTGTTCACAGAAGGATCATTACCGCTT
TGTTTTTTGATCGGTGCAACGCAAGGTTTTGTCATTTTGTTCTCCTTATA
TCTGTGGTATGAGATACGCAAGAATCGTTCAGTCTTTTGGGCGACAACAG
TTCGGAAAAGGATATGCTGGGGAATCTTTTTAACATACATGGCTGCATTA
TATACATTAGCGCATCAAGGTCTACGTGCTGTTTGTAACTCACTGTCTGC
TCCAAGcTGTCGTGACGGTGTTGTGTTATATATCGACTTCAAAGTGTTCA
AACCAAAATACCTGAATGCATGGTCTTTCTTCTCTCTATGGAACACCATA
CTgGAAAGtgcacaaaaaagttttatatcgCTCGCCATCTTTGCCTTTCT
TAACATTTCAAAGACACCACTGGAAGAACGGCTACAGATGATGACGCGGA
AAGTGAGAGAATATTTATGAATGGAACCTAATGAATACAAACTACATTTC
TTAAACATTGAAGTCTTCAAAGATCCTAAACGAGAATTAGCTTTGATATT
CACTATACAGTATGCATTAGAGGCATTCAATCGGATACGTGATCACGAAT
CTAGAGTCAATTACCATTGTTTATTATTCGGTAAAATCTCCGAGAAAGAT
AGAGTGTTCACAGAAGGATCATTACCGCTTTGTTTTTTGATCGGTGCAAC
GCAAGGTTTTGTCATTTTGTTCTCCTTATATCTGTGGTATGAGATACGCA
AGAATCGTTCAGTCTTTTGGGCGACAACAGTTCGGAAAAGGATATGCTGG
GGAATCTTTTTAACATACATGGCTGCATTATATACATTAGCGCATCAAGG
TCTACGTGCTGTTTGTAACTCACTGTCTGCTCCAAGcTGTCGTGACGGTG
TTGTGTTATATATCGACTTCAAAGTGTTCAAACCAAAATACCTGAATGCA
TGGTCTTTCTTCTCTCTATGGAACACCATACTgGAAAGtgcacaaaaaag
ttttatatcgCTCGCCATCTTTGCCTTTCTTAACATTTCAAAGACACCAC
TGGAAGAACGGCTACAGATGATGACGCGGAAAGTGAGAGAATATTTATGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_042249XLOC_042249Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00067663-exon-scaffold_472-1491911889:334681..334754TCONS_00067663-exon-scaffold_472-1491911889:334681..334754Clytia hemisphaericaexon
TCONS_00067663-exon-scaffold_472-1510915933:334681..334754TCONS_00067663-exon-scaffold_472-1510915933:334681..334754Clytia hemisphaericaexon
TCONS_00067663-exon-scaffold_472-1575043694:334681..334754TCONS_00067663-exon-scaffold_472-1575043694:334681..334754Clytia hemisphaericaexon
TCONS_00067663-exon-scaffold_472-1491911889:337663..337974TCONS_00067663-exon-scaffold_472-1491911889:337663..337974Clytia hemisphaericaexon
TCONS_00067663-exon-scaffold_472-1510915933:337663..337974TCONS_00067663-exon-scaffold_472-1510915933:337663..337974Clytia hemisphaericaexon
TCONS_00067663-exon-scaffold_472-1575043694:337663..337974TCONS_00067663-exon-scaffold_472-1575043694:337663..337974Clytia hemisphaericaexon
TCONS_00067663-exon-scaffold_472-1491911889:338474..338590TCONS_00067663-exon-scaffold_472-1491911889:338474..338590Clytia hemisphaericaexon
TCONS_00067663-exon-scaffold_472-1510915933:338474..338590TCONS_00067663-exon-scaffold_472-1510915933:338474..338590Clytia hemisphaericaexon
TCONS_00067663-exon-scaffold_472-1575043694:338474..338590TCONS_00067663-exon-scaffold_472-1575043694:338474..338590Clytia hemisphaericaexon
TCONS_00067663-exon-scaffold_472-1491911889:339197..339293TCONS_00067663-exon-scaffold_472-1491911889:339197..339293Clytia hemisphaericaexon
TCONS_00067663-exon-scaffold_472-1510915933:339197..339293TCONS_00067663-exon-scaffold_472-1510915933:339197..339293Clytia hemisphaericaexon
TCONS_00067663-exon-scaffold_472-1575043694:339197..339293TCONS_00067663-exon-scaffold_472-1575043694:339197..339293Clytia hemisphaericaexon
TCONS_00067663-exon-scaffold_472-1491911889:339796..339882TCONS_00067663-exon-scaffold_472-1491911889:339796..339882Clytia hemisphaericaexon
TCONS_00067663-exon-scaffold_472-1510915933:339796..339882TCONS_00067663-exon-scaffold_472-1510915933:339796..339882Clytia hemisphaericaexon
TCONS_00067663-exon-scaffold_472-1575043694:339796..339882TCONS_00067663-exon-scaffold_472-1575043694:339796..339882Clytia hemisphaericaexon
TCONS_00067663-exon-scaffold_472-1491911889:343604..344010TCONS_00067663-exon-scaffold_472-1491911889:343604..344010Clytia hemisphaericaexon
TCONS_00067663-exon-scaffold_472-1510915933:343604..344010TCONS_00067663-exon-scaffold_472-1510915933:343604..344010Clytia hemisphaericaexon
TCONS_00067663-exon-scaffold_472-1575043694:343604..344010TCONS_00067663-exon-scaffold_472-1575043694:343604..344010Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00067663-proteinTCONS_00067663-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_472supercontigscaffold_472:334681..344010 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.86227 6.40266 3.93745 2.40261 4.74232 4.18255 5.20255 4.56058 2.0489 2.82233 1.12777 1.13511 2.44913 4.20846 3.14797 3.33574 1.85842 2.6093 2.31031 1.89357 2.99655 3.124 3.36133 3.68433 11.9059 14.2317 2.03845 1.4284 2.77417 4.98133
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00067663 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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