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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00067566 ID=TCONS_00067566|Name=TCONS_00067566|organism=Clytia hemisphaerica|type=transcript|length=1303bp cttttagtGATATAAAGTGCAAAATGACTGATTATAAGAAATTTGATCCG TTAGAACATGGCCTTGATGCTACATTTCGATTCACAAATTACACCAAATT GAAGGGGTGAGGTTGCAAAGTCCCTCAGGAGGAATTGCACAAACTTCTTG AGGGACTGAAACAAGATCAAACCAAAAGCAATGGTTCAACAACAGGAGAT TTTGGATTCCTTGGTATTGGCTTAGATTCTTGTGTATTACCGACACGTCA TAAAGGCGTCAAACTCGTGCAAACTACTGACTTTTTCTATCCTTTAGTGG ATGACCCTTACATGCAAGGGAAAATTGCATGTGCTAATGTTTTGAGTGAT TTGTATGCGACTGGTGTATACCAATGTGACAATTTACTGATGTTACTTGG CGTGAGTAATGAACTGAGAACCAATGAACGAGAAATTGTTACCAGGCAGG TAATCAAAGGTTTCAATGATTTAGCCAAAGAAGCCGAAACAACAATCAAT GGTGGACAAACCGTTTTGAATCCTTGGTATATCATTGGTGGTGTGGCGAC CAGTATATGCTCTGATCAAGAATTCATCATGCCAAATGGAGGGAAAGCTG GGGATGTCTTGGTTCTGACAAAACCACTTGGAACACAGATTGCTGTCAAT GCCCATCAATGGATTGAAGAgCCAAAATATTGGGAAAGGATACAAGATGT AGTGAACAAAGAAGATGTAGTGGATGCTTACAACAAAGCTATGTTCTCCA TGGCCAGGTTGAATAGAAATGCTGCAAAACTGATGCAAAAATACCAAGCA CATGGTGCAACAGATGTGACTGGGTTTGGGATCATTGGCCATGCTACGAA CTTGGTGGAGAGCCAGTTAGAGAAAGTGGATTTCATTCTTCACACACTTC CCATCATCAAGGATATGGTGAATGTTTATAAAAAGTGTGGCATCAATTTC AAATTGTTAGATGGATATTCTGCGGAAACGTCAGGTGGTCTCTTGGTTTG CTTGGCAAAAGATGTTGCTAATGATTACATTGCAGAACTAAAGGAGTTGG ATGGTGCAGATGCATGGATCATTGGGGATGTCGTCGAAGGGGGTAGAAAG GCTAAAATCACACCACATGTTCAAATAATAGAAGTTTAAATCTACCTCGT GACAAAAGGCCATTTTATGAAgctcttttttgaaaagcttgtCTGGAAAA GAGCTGATTTATTTTTATGGTTCTTTTGTATTAGTACTGGTATTTTTAGG CTACTTTTTAATGTAAAAACGAAAGAAATACAAACATACTACTCCGAGCA TAA Run BLAST on NCBI protein sequence of TCONS_00067566-protein >TCONS_00067566-protein ID=TCONS_00067566-protein|Name=TCONS_00067566-protein|organism=Clytia hemisphaerica|type=polypeptide|length=275bp
MQGKIACANVLSDLYATGVYQCDNLLMLLGVSNELRTNEREIVTRQVIKG FNDLAKEAETTINGGQTVLNPWYIIGGVATSICSDQEFIMPNGGKAGDVL VLTKPLGTQIAVNAHQWIEEPKYWERIQDVVNKEDVVDAYNKAMFSMARL NRNAAKLMQKYQAHGATDVTGFGIIGHATNLVESQLEKVDFILHTLPIIK DMVNVYKKCGINFKLLDGYSAETSGGLLVCLAKDVANDYIAELKELDGAD AWIIGDVVEGGRKAKITPHVQIIEV Run BLAST on NCBI transcript from alignment at scaffold_471:343178..345379+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00067566 ID=TCONS_00067566|Name=TCONS_00067566|organism=Clytia hemisphaerica|type=transcript|length=2202bp|location=Sequence derived from alignment at scaffold_471:343178..345379+ (Clytia hemisphaerica) cttttagtGATATAAAGTGCAAAATGACTGATTATAAGAAATTTGATCCG
TTAGAACATGGCCTTGATGCTACATTTCGATTCACAAATTACACCAAATT
GAAGGGGTGAGGTTGCAAAGTCCCTCAGGAGGTTAGTTTCAATTGCAAAT
TATTTATTGTATCAGATTATATAAAAGTGAATATCCATTAATGATCGGTT
TGTTGAACTATCTGTAAGGATTTCCGATAAAATGTTTTACCCGttgaaaa
tgtattttctttctattttacAAGGAATTGCACAAACTTCTTGAGGGACT
GAAACAAGATCAAACCAAAAGCAATGGTTCAACAACAGGAGATTTTGGAT
TCCTTGGTATTGGCTTAGATTCTTGTGTATTACCGACACGTCATAAAGGC
GTCAAACTCGTGCAAACTACTGACTTTTTCTATCCTTTAGTGGATGACCC
TTACATGCAAGGGAAAATTGCATGTGCTAATGTTTTGAGTGATTTGTATG
CGACTGGTGTATACCAATGTGACAATTTACTGATGTTACTTGGCGTGAGT
AATGAACTGAGAACCAATGAACGAGAAATTGTTACCAGGCAGGTAATCAA
AGGTTTCAATGATTTAGCCAAAGAAGCCGAAACAACAATCAATGGTGGAC
AAACCGTTTTGAATCCTTGGTATATCATTGGTGGTGTGGCGACCAGTATA
TGCTCTGATCAAGAATTCATCATGTTTGTagcttttaactttttctatta
tagatttttcttgaatttacAGACATCAACAATCTTTTTTCACAATTAGT
AACTTTTGGTACGTTTGTGAGCTTTTCAAGCAATAATGTTTTTTCAATAT
AGGCGTTTAGTGTTACTTTCATTTAGGCCAAATGGAGGGAAAGCTGGGGA
TGTCTTGGTTCTGACAAAACCACTTGGAACACAGATTGCTGTCAATGCCC
ATCAATGGATTGAAGAggttttttttgcttatgtTGTATTAACTGTCTTG
TCATTTTATAATCATTCCTGCCCTAGTTATTGTTGCTTACATCCGAGAAA
CTTTTCTTTGTTATCCATGTTTGTATTATGTTCATTTGAATCCATGGATA
GTGCTTTTTCCAACTGGAAacttattttttgtttcctcTCATAATTTTAT
TCAACCCTCTTCGGTCACCAacaaaattcaatttaaaatctaattttatt
tcttaatgTTAACTCCTTGCATGTTGCTTTTGAAGAACTTGTTTTTATTG
TGAGGCAACGAAGGCTTCGATGGGACCGAATGGTAGAAAAATCTTAAAGA
cttggtaattttttttgtctaaTACAGGACTACTTTTAATTCTCAATCGT
TAAACCAATGTTTCTTTGCTTTTGATTTCAGCCAAAATATTGGGAAAGGA
TACAAGATGTAGTGAACAAAGAAGATGTAGTGGATGCTTACAACAAAGCT
ATGTTCTCCATGGCCAGGTTGAATAGAAATGCTGCAAAACTGATGCAAAA
ATACCAAGCACATGGTGCAACAGATGTGACTGGGTTTGGGATCATTGGCC
ATGCTACGAACTTGGTGGAGAGCCAGTTAGAGAAAGTGGATTTCATTCTT
CACACACTTCCCATCATCAAGGATATGGTGAATGTTTATAAAAAGTGTGG
CATCAATTTCAAATTGTTAGATGGATATTCTGCGGAAACGTCAGGTGAGG
CTGAAGATTTTATAATGAgtgataatgtttttttgagGTCATGAGATGAT
TTTTTCTCAGCAATAACTATAATTAGGTCTCAGTTGTTAGGAAAGAGCTC
AAGTTCAGTTCGACTTTCTTGCTATAATTTCTTATCGTATTGGCATtata
aaaatgatcaaatttcGTATCACTTGGTTTTAGGTGGTCTCTTGGTTTGC
TTGGCAAAAGATGTTGCTAATGATTACATTGCAGAACTAAAGGAGTTGGA
TGGTGCAGATGCATGGATCATTGGGGATGTCGTCGAAGGGGGTAGAAAGG
CTAAAATCACACCACATGTTCAAATAATAGAAGTTTAAATCTACCTCGTG
ACAAAAGGCCATTTTATGAAgctcttttttgaaaagcttgtCTGGAAAAG
AGCTGATTTATTTTTATGGTTCTTTTGTATTAGTACTGGTATTTTTAGGC
TACTTTTTAATGTAAAAACGAAAGAAATACAAACATACTACTCCGAGCAT
AA Coding sequence (CDS) from alignment at scaffold_471:343178..345379+ >TCONS_00067566 ID=TCONS_00067566|Name=TCONS_00067566|organism=Clytia hemisphaerica|type=CDS|length=3312bp|location=Sequence derived from alignment at scaffold_471:343178..345379+ (Clytia hemisphaerica) ATGCAAGGGAAAATTGCATGTGCTAATGTTTTGAGTGATTTGTATGCGAC TGGTGTATACCAATGTGACAATTTACTGATGTTACTTGGCGTGAGTAATG AACTGAGAACCAATGAACGAGAAATTGTTACCAGGCAGGTAATCAAAGGT TTCAATGATTTAGCCAAAGAAGCCGAAACAACAATCAATGGTGGACAAAC CGTTTTGAATCCTTGGTATATCATTGGTGGTGTGGCGACCAGTATATGCT CTGATCAAGAATTCATCATGCCAAATGGAGGGAAAGCTGGGGATGTCTTG GTTCTGACAAAACCACTTGGAACACAGATTGCTGTCAATGCCCATCAATG GATTGAAGAgCCAAAATATTGGGAAAGGATACAAGATGTAGTGAACAAAG AAGATGTAGTGGATGCTTACAACAAAGCTATGTTCTCCATGGCCAGGTTG AATAGAAATGCTGCAAAACTGATGCAAAAATACCAAGCACATGGTGCAAC AGATGTGACTGGGTTTGGGATCATTGGCCATGCTACGAACTTGGTGGAGA GCCAGTTAGAGAAAGTGGATTTCATTCTTCACACACTTCCCATCATCAAG GATATGGTGAATGTTTATAAAAAGTGTGGCATCAATTTCAAATTGTTAGA TGGATATTCTGCGGAAACGTCAGGTGGTCTCTTGGTTTGCTTGGCAAAAG ATGTTGCTAATGATTACATTGCAGAACTAAAGGAGTTGGATGGTGCAGAT GCATGGATCATTGGGGATGTCGTCGAAGGGGGTAGAAAGGCTAAAATCAC ACCACATGTTCAAATAATAGAAGTTTAAATGCAAGGGAAAATTGCATGTG CTAATGTTTTGAGTGATTTGTATGCGACTGGTGTATACCAATGTGACAAT TTACTGATGTTACTTGGCGTGAGTAATGAACTGAGAACCAATGAACGAGA AATTGTTACCAGGCAGGTAATCAAAGGTTTCAATGATTTAGCCAAAGAAG CCGAAACAACAATCAATGGTGGACAAACCGTTTTGAATCCTTGGTATATC ATTGGTGGTGTGGCGACCAGTATATGCTCTGATCAAGAATTCATCATGCC AAATGGAGGGAAAGCTGGGGATGTCTTGGTTCTGACAAAACCACTTGGAA CACAGATTGCTGTCAATGCCCATCAATGGATTGAAGAgCCAAAATATTGG GAAAGGATACAAGATGTAGTGAACAAAGAAGATGTAGTGGATGCTTACAA CAAAGCTATGTTCTCCATGGCCAGGTTGAATAGAAATGCTGCAAAACTGA TGCAAAAATACCAAGCACATGGTGCAACAGATGTGACTGGGTTTGGGATC ATTGGCCATGCTACGAACTTGGTGGAGAGCCAGTTAGAGAAAGTGGATTT CATTCTTCACACACTTCCCATCATCAAGGATATGGTGAATGTTTATAAAA AGTGTGGCATCAATTTCAAATTGTTAGATGGATATTCTGCGGAAACGTCA GGTGGTCTCTTGGTTTGCTTGGCAAAAGATGTTGCTAATGATTACATTGC AGAACTAAAGGAGTTGGATGGTGCAGATGCATGGATCATTGGGGATGTCG TCGAAGGGGGTAGAAAGGCTAAAATCACACCACATGTTCAAATAATAGAA GTTTAAATGCAAGGGAAAATTGCATGTGCTAATGTTTTGAGTGATTTGTA TGCGACTGGTGTATACCAATGTGACAATTTACTGATGTTACTTGGCGTGA GTAATGAACTGAGAACCAATGAACGAGAAATTGTTACCAGGCAGGTAATC AAAGGTTTCAATGATTTAGCCAAAGAAGCCGAAACAACAATCAATGGTGG ACAAACCGTTTTGAATCCTTGGTATATCATTGGTGGTGTGGCGACCAGTA TATGCTCTGATCAAGAATTCATCATGCCAAATGGAGGGAAAGCTGGGGAT GTCTTGGTTCTGACAAAACCACTTGGAACACAGATTGCTGTCAATGCCCA TCAATGGATTGAAGAgCCAAAATATTGGGAAAGGATACAAGATGTAGTGA ACAAAGAAGATGTAGTGGATGCTTACAACAAAGCTATGTTCTCCATGGCC AGGTTGAATAGAAATGCTGCAAAACTGATGCAAAAATACCAAGCACATGG TGCAACAGATGTGACTGGGTTTGGGATCATTGGCCATGCTACGAACTTGG TGGAGAGCCAGTTAGAGAAAGTGGATTTCATTCTTCACACACTTCCCATC ATCAAGGATATGGTGAATGTTTATAAAAAGTGTGGCATCAATTTCAAATT GTTAGATGGATATTCTGCGGAAACGTCAGGTGGTCTCTTGGTTTGCTTGG CAAAAGATGTTGCTAATGATTACATTGCAGAACTAAAGGAGTTGGATGGT GCAGATGCATGGATCATTGGGGATGTCGTCGAAGGGGGTAGAAAGGCTAA AATCACACCACATGTTCAAATAATAGAAGTTTAAATGCAAGGGAAAATTG CATGTGCTAATGTTTTGAGTGATTTGTATGCGACTGGTGTATACCAATGT GACAATTTACTGATGTTACTTGGCGTGAGTAATGAACTGAGAACCAATGA ACGAGAAATTGTTACCAGGCAGGTAATCAAAGGTTTCAATGATTTAGCCA AAGAAGCCGAAACAACAATCAATGGTGGACAAACCGTTTTGAATCCTTGG TATATCATTGGTGGTGTGGCGACCAGTATATGCTCTGATCAAGAATTCAT CATGCCAAATGGAGGGAAAGCTGGGGATGTCTTGGTTCTGACAAAACCAC TTGGAACACAGATTGCTGTCAATGCCCATCAATGGATTGAAGAgCCAAAA TATTGGGAAAGGATACAAGATGTAGTGAACAAAGAAGATGTAGTGGATGC TTACAACAAAGCTATGTTCTCCATGGCCAGGTTGAATAGAAATGCTGCAA AACTGATGCAAAAATACCAAGCACATGGTGCAACAGATGTGACTGGGTTT GGGATCATTGGCCATGCTACGAACTTGGTGGAGAGCCAGTTAGAGAAAGT GGATTTCATTCTTCACACACTTCCCATCATCAAGGATATGGTGAATGTTT ATAAAAAGTGTGGCATCAATTTCAAATTGTTAGATGGATATTCTGCGGAA ACGTCAGGTGGTCTCTTGGTTTGCTTGGCAAAAGATGTTGCTAATGATTA CATTGCAGAACTAAAGGAGTTGGATGGTGCAGATGCATGGATCATTGGGG ATGTCGTCGAAGGGGGTAGAAAGGCTAAAATCACACCACATGTTCAAATA ATAGAAGTTTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00067566-exon-scaffold_471-1491911889:343178..343308 | TCONS_00067566-exon-scaffold_471-1491911889:343178..343308 | Clytia hemisphaerica | exon |
TCONS_00067566-exon-scaffold_471-1510915933:343178..343308 | TCONS_00067566-exon-scaffold_471-1510915933:343178..343308 | Clytia hemisphaerica | exon |
TCONS_00067566-exon-scaffold_471-1575043694:343178..343308 | TCONS_00067566-exon-scaffold_471-1575043694:343178..343308 | Clytia hemisphaerica | exon |
TCONS_00067566-exon-scaffold_471-1491911889:343452..343900 | TCONS_00067566-exon-scaffold_471-1491911889:343452..343900 | Clytia hemisphaerica | exon |
TCONS_00067566-exon-scaffold_471-1510915933:343452..343900 | TCONS_00067566-exon-scaffold_471-1510915933:343452..343900 | Clytia hemisphaerica | exon |
TCONS_00067566-exon-scaffold_471-1575043694:343452..343900 | TCONS_00067566-exon-scaffold_471-1575043694:343452..343900 | Clytia hemisphaerica | exon |
TCONS_00067566-exon-scaffold_471-1491911889:344054..344144 | TCONS_00067566-exon-scaffold_471-1491911889:344054..344144 | Clytia hemisphaerica | exon |
TCONS_00067566-exon-scaffold_471-1510915933:344054..344144 | TCONS_00067566-exon-scaffold_471-1510915933:344054..344144 | Clytia hemisphaerica | exon |
TCONS_00067566-exon-scaffold_471-1575043694:344054..344144 | TCONS_00067566-exon-scaffold_471-1575043694:344054..344144 | Clytia hemisphaerica | exon |
TCONS_00067566-exon-scaffold_471-1491911889:344559..344871 | TCONS_00067566-exon-scaffold_471-1491911889:344559..344871 | Clytia hemisphaerica | exon |
TCONS_00067566-exon-scaffold_471-1510915933:344559..344871 | TCONS_00067566-exon-scaffold_471-1510915933:344559..344871 | Clytia hemisphaerica | exon |
TCONS_00067566-exon-scaffold_471-1575043694:344559..344871 | TCONS_00067566-exon-scaffold_471-1575043694:344559..344871 | Clytia hemisphaerica | exon |
TCONS_00067566-exon-scaffold_471-1491911889:345061..345379 | TCONS_00067566-exon-scaffold_471-1491911889:345061..345379 | Clytia hemisphaerica | exon |
TCONS_00067566-exon-scaffold_471-1510915933:345061..345379 | TCONS_00067566-exon-scaffold_471-1510915933:345061..345379 | Clytia hemisphaerica | exon |
TCONS_00067566-exon-scaffold_471-1575043694:345061..345379 | TCONS_00067566-exon-scaffold_471-1575043694:345061..345379 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_471 | supercontig | scaffold_471:343178..345379 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
Term | Definition |
GO:0005524 | ATP binding |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category |
Term Accession |
Term Name |
molecular_function |
GO:0005524 |
ATP binding |
Blast
BLAST of TCONS_00067566 vs. Swiss-Prot (Human)
Match: SPS1 (Selenide, water dikinase 1 OS=Homo sapiens GN=SEPHS1 PE=1 SV=2) HSP 1 Score: 426.787 bits (1096), Expect = 1.626e-146 Identity = 204/375 (54.40%), Postives = 267/375 (71.20%), Query Frame = 3
Query: 24 MTDYKKFDPLEHGLDATFRFTNYTKLKG*GCKVPQEELHKLLEGLKQDQTKSNGSTTGD-FGFLGIGLDSCVLPTRHKGVKLVQTTDFFYPLVDDPYMQGKIACANVLSDLYATGVYQCDNLLMLLGVSNELRTNEREIVTRQVIKGFNDLAKEAETTINGGQTVLNPWYIIGGVATSICSDQEFIMPNGGKAGDVLVLTKPLGTQIAVNAHQWIEEPKYWERIQDVVNKEDVVDAYNKAMFSMARLNRNAAKLMQKYQAHGATDVTGFGIIGHATNLVESQLEKVDFILHTLPIIKDMVNVYKKCGINFKLLDGYSAETSGGLLVCLAKDVANDYIAELKEL---DGADAWIIGDVVEGGRKAKITPHVQIIEV 1136
M+ + F+P + LD +FR T +T+LKG GCKVPQ+ L KLLE L+++ + + G LGIG+D+CV+P RH G+ LVQTTD+ YP+VDDPYM G+IACANVLSDLYA GV +CDN+LMLLGVSN++ ER+ V +I+GF D A+EA T++ GGQTVLNPW ++GGVAT++C EFIMP+ GDVLVLTKPLGTQ+AV HQW++ P+ W +I+ VV +EDV AY +AM +MARLNR AA LM + AH ATD+TGFGI+GHA NL + Q +V F++H LP++ M V K CG F L+ G ETSGGLL+CL ++ A + AE+K +G AWIIG V +G R A+I +IIEV
Sbjct: 1 MSTRESFNPESYELDKSFRLTRFTELKGTGCKVPQDVLQKLLESLQENHFQEDEQFLGAVMPRLGIGMDTCVIPLRHGGLSLVQTTDYIYPIVDDPYMMGRIACANVLSDLYAMGVTECDNMLMLLGVSNKMTDRERDKVMPLIIQGFKDAAEEAGTSVTGGQTVLNPWIVLGGVATTVCQPNEFIMPDNAVPGDVLVLTKPLGTQVAVAVHQWLDIPEKWNKIKLVVTQEDVELAYQEAMMNMARLNRTAAGLMHTFNAHAATDITGFGILGHAQNLAKQQRNEVSFVIHNLPVLAKMAAVSKACGNMFGLMHGTCPETSGGLLICLPREQAARFCAEIKSPKYGEGHQAWIIGIVEKGNRTARIIDKPRIIEV 375
The following BLAST results are available for this feature:
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