TCONS_00067558 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00067558
Unique Name	TCONS_00067558
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	3059

Sequence

The following sequences are available for this feature:

transcript sequence
transcript from alignment at scaffold_471:201149..209550+

transcript sequence

>TCONS_00067558 ID=TCONS_00067558|Name=TCONS_00067558|organism=Clytia hemisphaerica|type=transcript|length=3059bp
ATCCGAATATTTCGGCAACCTCAGGAACGAATTCAACAGTCAAGTTCTAG
AggaatttggaaaatcttttgattttgtcAACAAAGATGTGGACGAAGCT
TTACGGCAATTCCAGTCTTATTTCAAATTAACCGGAGAAGCACAAACTGT
TGAAAAGTTCTTGCAGGTATTTTCAGATCGTTACGTGGAGTGCAATCCAG
GTCGCGTATCCGACAATCCGGACACTATCCTCCTACTGGCGTTCGCATTG
GCCATGCTGAACACGGATTTGCACAATCAGAACGTCAAAAGACGGATGAG
CCCTGAAGACTTCATGAAGAACTTAAGAGGAACAGATAACGGAAACGACC
TGGATCAAGAAATGTTGAGGAATATGTACATTCGTATTCAAAAGAATGAA
TTCGCAACGGGTGCTGACCACACAACGCAACTTCATCAAATCGAGAACAG
TTTCATTGGAAAGACACCTAGTCTAGCAGTACCACATCGGCAGTTCGTCA
AATTGTACACTGTGGAAGAAGTGCACGAGACCAACCGTAAAGACAAACAA
CTTCATAACAGACTGGCATTCTTGTTCAATGATCTACTCATTCTTGCCAA
ACCACGTGGTAAAGGAGGTAGCCATGGAGCAGGTCACATGTTCACGTGTA
AAGCTTCTTATCCTCTACTTGGTAAAAAAGTTGCAGAGTTCAGCAACGAA
CATTATTCACTGGGTGTACTTCTTGTGGGGCGGTTTGATAACAAAGTGGT
TGCCACTTTCAACATGAAAGATGAAAAGACGAGGCGTTCTTTCGTCGACG
AACTGGATGAATATATAAGAGAGACCACTGGTATGGAAAACATTCGTTTA
GCACTTAGCAAAGTGAATCAATTAACGTGGCACAATCGAAGGAAGGACGA
CGGCCGCACCAAATCTCTTCTCTTACAAGACTCATCGTCATCATCCAAAA
TGGAGGCCGGTGGAGCGGAGACGACCAGTCTAACAGACCTTCGCATCGGT
TCCAACCATTCCAACGAAGGGGAGAGTAATCAAAATAAGATCATGACGTC
AGCTTCCATGGGAGATATCAATGAAGTTGAATCAGATTCTGAAGACTTTG
AAGGAATGCAAAGAACAAACAGCGCCAATTCACTTGGACCTCCCAGGAAC
ACTCCACAGTCGCCTACAAAACCTTCGAAAACTGGATTTCTTTACACCAT
TAAAGAAGTGGTCCATTCGCCGAGTTTGCGCCGAAAACACTCGTCCTTTT
TACGAAACGATCGGTCGGCACCGAAAGAACACCGACGTAGCATGCCTGTG
ATCTCTTCAAAAACGAAATTTTAGCACCACTAAAGGCTCGTCTCAAACAA
CGGGCAATGGTCACTCAATGTCGCGTACCACATCCGTCAAAACTTTATTC
GGCCATTGGGCGCCCAAATTCCGTAAATCGATGACGTATAATGACAGTAG
ACGCCGAGGTTCGTCTTCTGTCAACGAAACTGACACGCCACTTATAGGGC
GCGACCGTCGCCATCATTCACACTTACAAGCTCGAGATATCTCGCCCTCT
CCGCCCGTTAAAAGGAACCGAACACCCTCGGTGTTATCTGAAGGATCGAA
TGCCGAAAAACGTAAAAGTGCTTTTCTATGATGAATTGGTCGATCCGTGC
AAGTATCGAGTAAATCGGGTGATGAAGATCTCCAAAAGTGTGGGGCTTTG
AATCTTTCCTGAAACGGTCCATGAATTCAACACCTTCGCAACTTCCGAGA
TAAATTTCTTGATGATTTGACTGGTGTTTGATTTCAAGAATCCTTTTGTT
GAACGGGGTAATAAACTCGCAATGAACTTTCAATAATAGACAGTAATTAA
AATGCAACAGGAAGAACCGGATTCACAAGAGGGCGAGTATAAATCACTAC
ACCTTACTACACACAACAATTGCATattttaattgaaggtagaAAGTATC
TTTTCACAATGTTTGATTTTGGAAACTCTGTTGGGATGGACTATGATCAC
ACGGATTGGTCGGGAAACATCCGAACCTTCAGCCtgatattttcaatgaa
atttggtcaaatttgttttGAGCAAATGCAACTGTTGTGCAATTAGACAC
AAAACGTTTTATAAAGTAAAATACTGCAAAAAATGGAATTTCGTAATGAT
AAAAATGATGTTTTATAGATGAAGGTTTTAGTTTGATTCACGTGTAAATA
ACAGTAGAAGCAATGTAGcaataaatcaaagaaaattacAAGACGACACA
GCACTGGCTAAGGAGGCTTTCAAAAATGCTTTAGTTATCATTACTAAGTT
AGAAATTAAAGTTGTTTTATAATATGGATTTAGAccaagatttttttcat
aataatttCAACTTCTCCTTCTTTCAGAACACCTTTGCATATGAAAATGA
TAAGAATTTCGTGATCTGGCAAGTACTCGAATCTCCTCCTATCCCATTTT
AAAACCGATAATGTACTCATTTTTATATCAAACGTCGAGGTTCGAAATCT
TGGTTTAGCCAATGTATtgtttagctttttgttcaattttcttttgttac
aaacaaaaaacaagttgatcacgttaccaaaatctccttttgggattggt
ctattttctaatcacatgatcaaaaagtttgcaaaatagatcgattttgg
tacgtaagctcatcttttaacaataaaaagagacaaaaaagccttccaga
ccagtgatTATGGTTTAGCAAATGCATTAAGGCAAATCCGAATTGTAGTA
CAGAATATTTTGAGACATCCTGTGAGGAATAAATTCTACCATCCAGTCCT
TCTTTTTACACACCTTTAGTTTTTTTTACAATAAGATTTACTTTAGTAGA
ATGTTTGATACGGTTTAACTGATTTGATTTGAAGTaagattattttatta
ttttttgttacaaTTATACTTTTTTAGCATTATAAAAGGAAaataattat
caattttttcgTAAACAATAGCAATATGCGACGTTTTTTAAGAGGATAAA
TTATTGCGAATGATGATAAAGTACAATCCATTGATATAAAGACACAATCA
AACTGAAAT

Run BLAST on NCBI

transcript from alignment at scaffold_471:201149..209550+

Legend: exon

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00067558 ID=TCONS_00067558|Name=TCONS_00067558|organism=Clytia hemisphaerica|type=transcript|length=8402bp|location=Sequence derived from alignment at scaffold_471:201149..209550+ (Clytia hemisphaerica)
ATCCGAATATTTCGGCAACCTCAGGAACGAATTCAACAGTCAAGTTCTAG
AGTAAGTCAGCTACCTCTTTGTTGATTGATAGTGCTACATGAAATCTTCT
TCTCTTTCAGTGGTTTTGGGCTGTGCTCCAGAAAGTTGGACAAAAAATAG
TTGCATACTTGAAAACCATGTCTTTTGTATGCGAGATTTGTTTTGACACC
CGGAATTTGCCGCCCAATATTGAACTAGTATGAGTGTAAGGGGCCGCCGA
TTCCGTTTATTCGTGTGAAGTTCTAACCATGTGactaattttttactttt
aacattttcagggaatttggaaaatcttttgattttgtcAACAAAGATGT
GGACGAAGCTTTACGGCAATTCCAGTCTTATTTCAAATTAACCGTGAGTG
TTTGCAATGGtttgttttgcatatttttcatTATCCTTTTCAGGAGCGTA
GTGAGTCGACCAAATTGGGGTAATATGGGGAGGCAATTTTAGTAGGTGTT
ATTAACGTCCCCTatcaatgaaaataattttcgtcGTTAACGGTTATCCA
AATGATAGCGGGCGGACTATACATTGGCCCAGATAACTATTACCATGTTA
GGGGGTTGGGTGCCCTACCTTGATACAAGAGTGCGGAAAAGTATGCCAGA
CTTTTCATCTAAGgttgtgatgacgtcactcacACGAATCAGCACTCGCG
AGAGCAATTGTTGACAACGTGTATTTATCCCGGGATGGGGTCATCCTTCT
TTTCttctattgttttaaaaaattccatagAGCTTGTTTTTCTCGGTTTC
TAAAATTGTTTCCTTATTCACTTTCAGGGAGAAGCACAAACTGTTGAAAA
GTTCTTGCAGGTTTGTTCATTATATTGAGTGCTAGTTGATTGCTTATCTA
ACAAACGTCCCCGTTGAAGTGGTGGATGTAACGTGTTTGAATACTATGCA
TCAAATAAATTGCTCGCCCGTGCTCACATCAACCAATATGTAGTGGTACC
CACTTTGCGGGATAACTCACTTTGCATGAATTTCGACGAAAAAGATATAC
CGATAGAGCTTTTTATAAATTAGTCTTCaaatgtttataaataaaatcaa
cttaTATAATGAGATCGTCGCAGATCAAATGTCATAtggtaatattttga
aaacaaggtATAGCTGGtacataatttatgaaaaggtctatcagtGGTTT
AGCATCAATTAACTTTTTCGTGGACAGGTATTTTCAGATCGTTACGTGGA
GTGCAATCCAGGTCGCGTATCCGACAATCCGGACACTATCCTCCTACTGG
CGTTCGCATTGGCCATGCTGAACACGGATTTGCACAATCAGAACGTCAAA
AGACGGATGAGCCCTGAAGACTTCATGAAGAACTTAAGAGGAACAGATAA
CGGAAACGACCTGGATCAAGAAATGTTGAGGAATATGTACATTCGTATTC
AAAAGGTATTGTTCTGGTTTTTGAACCAGTGAAAATTAGATGGTATTACT
AATTATATGTCCAAATTGCTGGTCCATGGGAAAGAAACTCCATATAATTC
AAACTCACTGAAAGGATTTTATCTGTTACCTGACAGACTTAGGGCGATGG
TTAATCAACACATTGAACGTGTTAACTGCTGGTAATAGAAAATCCTTCCA
ATCACtccaccgtcctcaaaagtgcaaatacataaactcactaatTTATA
CTGCGAACacgaatttttaattttcttcttgttttgCTTTGTTCAGAATG
AATTCGCAACGGGTGCTGACCACACAACGCAACTTCATCAAATCGAGAAC
AGTTTCATTGGAAAGACACCTGTAAGTCAAGTCTTGGTTTGAAACACTAA
ACTATTTCTCGGTTAATCTTGCAGTGTTTCCACAATGATGAATTTAATAT
TTTAAAGTCCGGACACGGCAAAGCCCTTCGAACAACTACAACTGCGTAAA
TTGAACTAAATAATCGAAGGAGAGATCAAGGGAACTGGGGAAACTCTAGT
ttgggaggggggggggtctgaCCTTTCAACAATTAACCATGTAATCCTTG
TATCTTATTAACATAACATTTTGTCAATGCAATGCAAAGGTTTGTACAAA
TGACATTCATTCTTTCCTATAGAGTCTAGCAGTACCACATCGGCAGTTCG
TCAAATTGTACACTGTGGAAGAAGTGCACGAGACCAACCGTAAAGACAAA
CAACTTCATAACAGACTGGCATTCTTGTTCAATGATCTACTCATTGTAAG
AAATTAGCATCAATATTCTTTTTACACCACCAAAGCCTGGGTAAAGAGAT
TTTCTTGGAGTAAAAGTACaacctttaaaaaaactttttttgaagacATT
GATTGTTTTATACTTGATTGAAACGGGGAAGATTTACTTATTCCTCATTA
AATTCCCTTTTTCAATACCTGTTTTATCTGTTCCTTAAGACTTCCGATTC
ATTAGATTCGGGTTATTCCCAATTCCCATGTAATCTTAAGTATTTGAACA
TGATTTTTCTTACAGCTTGCCAAACCACGTGGTAAAGGAGGTAGCCATGG
AGCAGGTCACATGTTCACGTGTAAAGCTTCTTATCCTCTACTTGGTAAAA
AAGTTGCAGAGTTCAGCAACGAACGTAAGTAGTCCCCCTTTATCTAATCT
AACCTCCAGTNCTACTTGGTAAAAAGGTTGCAGAGTTCAGCAACGAACGT
AAGTAGTCCCCCTTTATCTAATCTAACCTCCAGTGTCCAAATCCGTATTT
TGTAATGCCTAATTATTACATTAACCATCGACTTATCCTTTATTTCAAGC
TGTTCAACAGTTACTTTTGACTTATTGAGAAGAGATCGCAATACACCTTA
GCACTGTCGGCTTTTTAGGAGACTCGTAATGAATTTGCAttacaaagaaa
attagttctcgaCACACGCCATTTTCGATTGACTCTAAGAAACCAAGCAA
ATTCCCGCAAAAACATGCCATACGAAAGAGACATTTCCCTGGACCTCTAG
GGTCTCCACTTATCTCCACTGcatgtagtctagcaagctagacgactaat
ttatacatagtaaaaataaagcaaaaagtaatgaatggaacaattttagt
cgtctagaaacctttgtgcacttaCTCNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNtcatttgagttgatttcgttttgagagtttgttgttgcttgataaa
ttgttttctcgctacgcaagtttctgcgtagctagcccctgtatctataa
ggcagGAACACCGGATtattccagtcgtttatacaaactaaatcccgtat
tactattattattattattggtattattagtattacacgcattataaacg
actccagtctacactGCATGCTATTTTCAGCATTCGAATAGTTCAACTAA
ATTGATATTCCTTTTATCACTTTAATGCAAAGGGGATCTTACACTTTTCC
AAAGAGCGCTCCTACACTTATGTTTTCGATACTGTTGCCCAAAAGAACTT
CCTTTTACCAGTCTCCTAAAAGGCTGACAGCGCTGCTAAAGATTGATAGG
TGTGTTCAAAAGAGACACCAGGCAAAGAGGCTTTCAGCAAATTTTATATA
TTCAAGGTTGCCTTTTTAAAGCTTCTAAGTCTCTTTAAAGAGTACATAGT
CGTAAGTGGCAAAAAGTCGAGATAAGGCCTTATTTCGACTTTGAAAGTAT
AACCCACACACATTATCCATGATTCCACAGCTTTAACATAACCAAGAAAT
TATACATTCTTTTTTTCCTCCTTCAGATTATTCACTGGGTGTACTTCTTG
TGGGGCGGTTTGATAACAAAGTGGTTGCCACTTTCAACATGAAAGATGAA
AAGACGAGGCGTTCTTTCGTCGACGAACTGGATGAATATATAAGAGAGGT
AGTTCTTTCTCACAAAAAGTCTAATGTCTACAGAAACTAGCTGAGAATTT
GAGTGTTGTCTTGCCTTTTAAATTTAATCTACTCTTGATAGATTGGAATG
TATATATTTGAAGAAATTCCAGGAAATTCTAAAGAGTACACCAAACCAAT
TCATTAATCTACatcatttcaattttgtttcGTTTTAGACCACTGGTATG
GAAAACATTCGTTTAGGTACGTGAAAAGCTCTTCTTAAGCATCTTTTCTT
GATCCAAAACATctgaaaaggcattaaaaattatACATCAAATTATTTAG
GTCTTGAAGAGGCAGTTTTTTTTACAAACTCGTGATATTTGTAACACCTT
AAACATTTGAGACAATACAACAAGTTGTAAACTCAAGTGTTTTAAGATGA
ACAGCCACGTGCCGTTGATTCATGTTACCATGTCCTAAATCATTGGTCCT
TTTTATCATTCGACAGCACTTAGCAAAGTGAATCAATTAACGTGGCACAA
TCGAAGGAAGGACGACGGCCGCACCAAATCTCTTCTCTTACAAGACTCAT
CGTCATCATCCAAAATGGAGGCCGGTGGAGCGGAGACGACCAGTCTAACA
GACCTTCGCATCGGTTCCAACCATTCCAACGAAGGGGAGAGTAATCAAAA
TAAGATCATGACGTCAGCTTCCATGGGAGATATCAATGAAGTTGAATCAG
GTTGGTATTTCTGAAAGCCTAGTCTACCCTCTTTTGAATTACGTCTCGTG
CAAACTTAGAAGTATACTTCATCAGCAAatgcttttcaatttttttaaaa
agtcgTATACATACCGCCACGTAGCTCCTTCTTGGGAGGGGTTATTACag
cggagtctccataactcgaacatgcaCGGGAATTGAAAATTGTCGGAGTT
ATGGGAatttcgaattaaggagactgatttataaggcattgtatACTGAA
GGGACAAATAAACTtattcgaattaaggagacattcgaataAAAAAGGTT
CGAGCTctggagactcaactgtatttATGTTTGTAGTTATTGTTTATATA
TCACGAAAGGGAAAATAATGACACCTTGTTGTGTCTAATGGACTATCTGA
ATATTAAAATATGGATATCTTCTCTCTTTACTGTAGATTCTGAAGACTTT
GAAGGAATGCAAAGAACAAACAGCGCCAATTCACTTGGACCTCCCAGGAA
CACTGTAAGTATCGCTTGAAATGATTAGGTTCGTCATTGCACTTTGCATG
CTAATGCACAATGAAAGAATATAAATACAGAACATGATTTATTGTTGAAA
TCTTTTTACAGATATATGTATGATAAAAGAACACACTTTTGGAGCACCAT
TTGCATTTGCACAAAATTTGCACAATATTAGCATGTATAAAACACATTGT
CGCATTTGCAATACCTTTTTCTAGCCACAGTCGCCTACAAAACCTTCGAA
AACTGGATTTCTTTACACCATTAAAGAAGTGGTCCATTCGCCGAGTTTGC
GCCGAAAACACTCGTCCTTTTTACGAAACGATCGGTCGGCACCGAAAGAA
CACCGACGTAGCATGCCTGTGATCTCTTCAAAAACGAGTAAGGCGTTGTT
TGGATGCATGGTTTTTAGAATATAACCAACATGCTAACAAACAATGCTAA
CAAACAATCCTTCTTTACTTATGAACATGACtgacaaaaaagttttatgt
tACTCGTGACGTAATATTTTATGCGCGGACTTCTCTTTACGCCTCTCTGG
AAAAACAGGCGCTACAGGCAATTGTACAGTCTAAAAAAGAATTTAACTTT
AAATTAAACACAGCTATCACTGTGTCTCACTCACTAACATTCTGCTGATT
GGTAGTGCGAAGGTTCAATCACAGGCCTGCACCGCANAACATTCTGctga
ttggtagtgtgaaggttcaATCACAGGCCTGCACCGCAGTGGaatgtgtt
cgaatcccaagaaCTAGGGAAATATGGAGATCTCTACCTTTACTCCGAAT
TTAACTCATTTTGTTCTTTAGCCATTTTTCTAACTTACGACACGGAAACT
AATAGACCTTTACAAATAATGATTGCGACATGAGTACCATGAGTTGAAGT
GTGCACTAATGtaaaatgatacaaaatatATAAGATCACAATACGCAACT
AAAGAAGTTCAAATCCTCAAATGGGCTCAACTAATTCAAATCTTTGCATG
GTGAACTAATAACTCGGTTCAAACTAATTTATCTAACATTTTTTTACCTG
AGAAAGTGACAGGGAGGGGCATCATCTTGATTTTTTAATCCTGAAAGCTG
ACTCCTAATACAATTGCACCCCTTAAAAGTCCCCTAAAAGCTGGGTTAGT
GTTTGCAGTTTGATATCTAGAAATTTTTTCTATGGATCTAACCTGTCATT
AACTTTCGTAATTGTCAAAACGTTTTCTTTTCTGAAAGCTTCATTATGAA
ATTATCTTCAGagatgtttttgtttcttcatCGAGACTTTTCTTTGATAT
AGTTTAGTGTTTTCAAAGCGTGACTTACAAAGCCTGATTCTCTCTTTTCT
TCTTCATAGAATTTTAGCACCACTAAAGGCTCGTCTCAAACAACGGGCAA
TGGTCACTCAATGTCGCGTACCACATCCGTCAAAACTTTATTCGGCCATT
GGGCGCCCAAATTCCGTAAATCGATGACGTATAATGACAGTAGACGCCGA
GGTTCGTCTTCTGTCAACGAAACTGACACGCCACTTATAGGGCGCGACCG
TCGCCATCATTCACACTTACAAGCTCGAGATATCTCGCCCTCTCCGCCCG
TTAAAAGGAACCGAACACCCTCGGTGTTATCTGAAGGATCGAATGCCGAA
AAACGTAAAAGTGCTTTTCTATGATGAATTGGTCGATCCGTGCAAGTATC
GAGTAAATCGGGTGATGAAGATCTCCAAAAGTGTGGGGCTTTGAATCTTT
CCTGAAACGGTCCATGAATTCAACACCTTCGCAACTTCCGAGATAAATTT
CTTGATGATTTGACTGGTGTTTGATTTCAAGAATCCTTTTGTTGAACGGG
GTAATAAACTCGCAATGAACTTTCAATAATAGACAGTAATTAAAATGCAA
CAGGAAGAACCGGATTCACAAGAGGGCGAGTATAAATCACTACACCTTAC
TACACACAACAATTGCATattttaattgaaggtagaAAGTATCTTTTCAC
AATGTTTGATTTTGGAAACTCTGTTGGGATGGACTATGATCACACGGATT
GGTCGGGAAACATCCGAACCTTCAGCCtgatattttcaatgaaatttggt
caaatttgttttGAGCAAATGCAACTGTTGTGCAATTAGACACAAAACGT
TTTATAAAGTAAAATACTGCAAAAAATGGAATTTCGTAATGATAAAAATG
ATGTTTTATAGATGAAGGTTTTAGTTTGATTCACGTGTAAATAACAGTAG
AAGCAATGTAGcaataaatcaaagaaaattacAAGACGACACAGCACTGG
CTAAGGAGGCTTTCAAAAATGCTTTAGTTATCATTACTAAGTTAGAAATT
AAAGTTGTTTTATAATATGGATTTAGAccaagatttttttcataataatt
tCAACTTCTCCTTCTTTCAGAACACCTTTGCATATGAAAATGATAAGAAT
TTCGTGATCTGGCAAGTACTCGAATCTCCTCCTATCCCATTTTAAAACCG
ATAATGTACTCATTTTTATATCAAACGTCGAGGTTCGAAATCTTGGTTTA
GCCAATGTATtgtttagctttttgttcaattttcttttgttacaaacaaa
aaacaagttgatcacgttaccaaaatctccttttgggattggtctatttt
ctaatcacatgatcaaaaagtttgcaaaatagatcgattttggtacgtaa
gctcatcttttaacaataaaaagagacaaaaaagccttccagaccagtga
tTATGGTTTAGCAAATGCATTAAGGCAAATCCGAATTGTAGTACAGAATA
TTTTGAGACATCCTGTGAGGAATAAATTCTACCATCCAGTCCTTCTTTTT
ACACACCTTTAGTTTTTTTTACAATAAGATTTACTTTAGTAGAATGTTTG
ATACGGTTTAACTGATTTGATTTGAAGTaagattattttattattttttg
ttacaaTTATACTTTTTTAGCATTATAAAAGGAAaataattatcaatttt
ttcgTAAACAATAGCAATATGCGACGTTTTTTAAGAGGATAAATTATTGC
GAATGATGATAAAGTACAATCCATTGATATAAAGACACAATCAAACTGAA
AT

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_042190	XLOC_042190	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_471	supercontig	scaffold_471:201149..209550 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
6.74523e-09	0	0	0	0	0	0	0	1.02031	0.861767	1.10536	0.506318	0.989493	0.145482	0	0	0	0	9.68865e-07	0	0	0	5.45079e-09	0	0	0	0	0	1.43818e-05	0

Blast

[Close]

BLAST of TCONS_00067558 vs. Swiss-Prot (Human)
Match: IQEC1 (IQ motif and SEC7 domain-containing protein 1 OS=Homo sapiens GN=IQSEC1 PE=1 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 1.135e-58
Identity = 122/300 (40.67%), Postives = 177/300 (59.00%), Query Frame = 2

Query:    5 EYFGNLRNEFNSQVLEEFGKSFDFVNKDVDEALRQFQSYFKLTGEAQTVEKFLQVFSDRYVECNPGRVSD--NPDTILLLAFALAMLNTDLHNQNVK--RRMSPEDFMKNLRGTDNGNDLDQEMLRNMYIRIQKNEFATGADHTTQLHQIENSFIGKTP----------SLAVPHRQFVKLYTVEEVHETNRKDK-QLHNRLAFLFNDLLILAKPRGKGGSHGAGHMFTCKASYPLLGKKVAEFSNEHYSLGVLL---VGRFDNKVVATFNMKDEKTRRSFVDELDEYIRETTGMENIRL 850
            E+ GN + +FN  VL+      DF   ++DEALR+FQ++ ++ GEAQ VE+ ++ FS RY  CNPG V    NPDTI +LAFA+ +LNTD+++ NVK  R+M  EDF+KNLRG D+G D+ +EML  +Y RI+K E  T  DH +Q+ ++E   +GK P           L++PHR+ V    + EV + N+  K  LH R  FLFNDLL++ K   K  +      ++ + S+ L G +V  F N++Y  G+ L   V   D KV+  FN  + + R+ F D+L E I E   ME  R+
Sbjct:  576 EFLGNRQKQFNRDVLDCVVDEMDFSTMELDEALRKFQAHIRVQGEAQKVERLIEAFSQRYCICNPGVVRQFRNPDTIFILAFAIILLNTDMYSPNVKPERKMKLEDFIKNLRGVDDGEDIPREMLMGIYERIRKRELKTNEDHVSQVQKVEKLIVGKKPIGSLHPGLGCVLSLPHRRLVCYCRLFEVPDPNKPQKLGLHQREIFLFNDLLVVTKIFQKKKN---SVTYSFRQSFSLYGMQVLLFENQYYPNGIRLTSSVPGADIKVLINFNAPNPQDRKKFTDDLRESIAEVQEMEKHRI 872

The following BLAST results are available for this feature:

BLAST of TCONS_00067558 vs. Swiss-Prot (Human)

BLAST of TCONS_00067558 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
IQEC1	1.135e-58	40.67	IQ motif and SEC7 domain-containing protein 1 OS=H...	[more]

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TCONS_00067558 (transcript) - C. hemisphaerica