|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00067527 ID=TCONS_00067527|Name=TCONS_00067527|organism=Clytia hemisphaerica|type=transcript|length=1201bp
GGAAAACTTTTATTgtaaacgctttttttataagaacggtgtttttccat
ttcatcatgaatattcctaagactttttggggaaaatcgtCCGGGGGATG
AATGGCAATCTAGAGGGGAATTGTCCTGAGTTTCCAAGctccatgatggt
ggtattctaTACCACACTGCCGGTTAGGTGAATGCATTTTCTAAAATCCA
ATGACAAATAGGTCACGATTGCAAAGTCGGATATACTCGACAATGCCCAA
TGGCAGATAGAATGGAAATACGCTTGTTGGGTACAGCCGACATTGGCACG
GATAGGTTTAAGAAAGCCAAGAATAGTTAAGAGACGAGTAGATAAAGATT
ATGTGAAGTGAAATCAATCCTTTTAacagaaaaatccaaaaagaatCCGA
CGgttcatcaaaatttataagTACTCGGTTGAAGAAAGTTGGTTTGCAAA
AAACTAGAATTAAATATTCAATCTTTAATATGTTATTTACCTCTTTCTGT
CAAGAGTTGTCATCATTATTGAATGAAGAGAGCGAAAAAGGTCTTGCTGT
GCGTTTTACAAGCTGAATAAGCAGAAGCAAGGTTATAAAAGTTATAAAAA
CAAACGAAAATtaacaataataacaaaaactcgaaaaagaaaaagaagag
caCTTCGTTGGCAagatgaaactgaagaagaaattgaaagaaaaacctGG
AAGTGTTCTATTGGTCAAAGTGGAATTTCGCGATGACGCCACCGAACAAA
AGGTAAGGCTTACTTACATCTTATCATCCAAAAACCTCTTTTTACCAAAA
GATTTATGGCGGAACATCCAACCGGTTGGTGGAGAGGACAAGTCCCTGGT
AGAGAAAATAAGAGTCCAAATTTTCGGATATTTTTGACGAAatacttgaa
tatctaaaagaCTGATTTCTATCGTCGAACCTGCTCACGTCACCGGGCTC
AACTTTTGGTCTTTTTGTAACTATTCGAAAGTCCCATTTGAAAAAATCGT
ATCAAGCTGGGAGAAAGATGAAAAACCCACTCAGTTATTCACCCTTCGAT
AGTGATTATCTTCAACATaagtttgatattttgaaagaaGATGAGTACAT
CCCATCCCCATTTCAacgtcaaaacaaaatggccatAGTCGAACGTGAGC
GTCATGGAAAATGTCACTCGAGAAAGTCGACTTTGGTTTCCATTAAAATC
A Run BLAST on NCBI transcript from alignment at scaffold_47:211531..212731 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00067527 ID=TCONS_00067527|Name=TCONS_00067527|organism=Clytia hemisphaerica|type=transcript|length=1201bp|location=Sequence derived from alignment at scaffold_47:211531..212731 (Clytia hemisphaerica)
TGATTTTAATGGAAACCAAAGTCGACTTTCTCGAGTGACATTTTCCATGA
CGCTCACGTTCGACTatggccattttgttttgacgtTGAAATGGGGATGG
GATGTACTCATCttctttcaaaatatcaaacttATGTTGAAGATAATCAC
TATCGAAGGGTGAATAACTGAGTGGGTTTTTCATCTTTCTCCCAGCTTGA
TACGATTTTTTCAAATGGGACTTTCGAATAGTTACAAAAAGACCAAAAGT
TGAGCCCGGTGACGTGAGCAGGTTCGACGATAGAAATCAGtcttttagat
attcaagtatTTCGTCAAAAATATCCGAAAATTTGGACTCTTATTTTCTC
TACCAGGGACTTGTCCTCTCCACCAACCGGTTGGATGTTCCGCCATAAAT
CTTTTGGTAAAAAGAGGTTTTTGGATGATAAGATGTAAGTAAGCCTTACC
TTTTGTTCGGTGGCGTCATCGCGAAATTCCACTTTGACCAATAGAACACT
TCCaggtttttctttcaatttcttcttcagtttcatctTGCCAACGAAGt
gctcttctttttctttttcgagtttttgttattattgttaATTTTCGTTT
GTTTTTATAACTTTTATAACCTTGCTTCTGCTTATTCAGCTTGTAAAACG
CACAGCAAGACCTTTTTCGCTCTCTTCATTCAATAATGATGACAACTCTT
GACAGAAAGAGGTAAATAACATATTAAAGATTGAATATTTAATTCTAGTT
TTTTGCAAACCAACTTTCTTCAACCGAGTActtataaattttgatgaacC
GTCGGattctttttggatttttctgtTAAAAGGATTGATTTCACTTCACA
TAATCTTTATCTACTCGTCTCTTAACTATTCTTGGCTTTCTTAAACCTAT
CCGTGCCAATGTCGGCTGTACCCAACAAGCGTATTTCCATTCTATCTGCC
ATTGGGCATTGTCGAGTATATCCGACTTTGCAATCGTGACCTATTTGTCA
TTGGATTTTAGAAAATGCATTCACCTAACCGGCAGTGTGGTAtagaatac
caccatcatggagCTTGGAAACTCAGGACAATTCCCCTCTAGATTGCCAT
TCATCCCCCGGacgattttccccaaaaagtcttaggaatattcatgatga
aatggaaaaacaccgttcttataaaaaaagcgtttacAATAAAAGTTTTC
C
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00067527-exon-scaffold_47-1491911889:211531..212731 | TCONS_00067527-exon-scaffold_47-1491911889:211531..212731 | Clytia hemisphaerica | exon |
| TCONS_00067527-exon-scaffold_47-1510915933:211531..212731 | TCONS_00067527-exon-scaffold_47-1510915933:211531..212731 | Clytia hemisphaerica | exon |
| TCONS_00067527-exon-scaffold_47-1575043694:211531..212731 | TCONS_00067527-exon-scaffold_47-1575043694:211531..212731 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_47 | supercontig | scaffold_47:211531..212731 . |
Blast
The following BLAST results are available for this feature:
|
