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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00067514 ID=TCONS_00067514|Name=TCONS_00067514|organism=Clytia hemisphaerica|type=transcript|length=988bp
AGAGAGAGTAAGAGAGCGTTTTTGTGTGTTGTGCTAGTAgaagcaaaatt
atttttactgtcGTTTTTACAAGAACTTGAGAACTTGACTTTACATTTTT
CGTTTTCGTTGTCGTTGTCGAACTCCTCTTGCGAGTGCTTGAGTGAATAA
CGGTAGGGTTTAGAACCCTCGTTGGATTTTTTTGCGCGCAACTTGTTCAA
GTAACaagaattttttatcttcagagAGCGAGATAATGCCCAGGAGTTGG
GCCGTcctgttttgaatttttaaacagcgagatttttgaacttttgaatt
ttttttgaaagtattttttttgttttacgtTTTGCTGCAAGCTTGAGgcg
attttcaattttgcaagtttgatttgattttttgatgatgCGCTAGTGCA
ATAGTGCGcagtttggaaaaaagttttttaacttaggaattttatgaaaa
ttgtttGAACCATCCTCACCCAGAGGAAATCTGATCCGTCAGTTCTTTTC
GGAGTCGTTTGTTGCTTTGATTTGTGATTCAtctattgaaaatattttgt
catctCGTAATATTATATTATAACATCTTACAATTACATatataataata
aagaaaaatattggatgttaatcacttcagtgctgAAAATCCAATCTAGA
TTTTGACTAGCTGCTTGATAATATCGTAATTCgataaaatttgtttgaaa
cttGTTTTGGAGTTATGTCTGAACCATCGGAAAATAAAGCGGCTCGTCAG
TCTGATTGGGATAGAAATATGACTAAGCGGAAGACCAGAAGATCTgataa
aaattatgattttgagCTTTATGAGAGACAGAGGTGTAGGCTTGATGCTG
AAATTATGAAAAGATGTGATCATGTTAATGAAATGTTGCTGAAGTCTTTG
CCATCTAGTTCTGTTAATGATGAAATCATGGGTCTAGATAAGGCTTTTGC
CGAATTGCTCTTTGTATGTGAAAAGTTGAAACCACTGA Run BLAST on NCBI transcript from alignment at scaffold_47:1187..2174 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00067514 ID=TCONS_00067514|Name=TCONS_00067514|organism=Clytia hemisphaerica|type=transcript|length=988bp|location=Sequence derived from alignment at scaffold_47:1187..2174 (Clytia hemisphaerica)
TCAGTGGTTTCAACTTTTCACATACAAAGAGCAATTCGGCAAAAGCCTTA
TCTAGACCCATGATTTCATCATTAACAGAACTAGATGGCAAAGACTTCAG
CAACATTTCATTAACATGATCACATCTTTTCATAATTTCAGCATCAAGCC
TACACCTCTGTCTCTCATAAAGctcaaaatcataatttttatcAGATCTT
CTGGTCTTCCGCTTAGTCATATTTCTATCCCAATCAGACTGACGAGCCGC
TTTATTTTCCGATGGTTCAGACATAACTCCAAAACaagtttcaaacaaat
tttatcGAATTACGATATTATCAAGCAGCTAGTCAAAATCTAGATTGGAT
TTTcagcactgaagtgattaacatccaatatttttctttattattatatA
TGTAATTGTAAGATGTTATAATATAATATTACGagatgacaaaatatttt
caatagaTGAATCACAAATCAAAGCAACAAACGACTCCGAAAAGAACTGA
CGGATCAGATTTCCTCTGGGTGAGGATGGTTCaaacaattttcataaaat
tcctaagttaaaaaacttttttccaaactgCGCACTATTGCACTAGCGca
tcatcaaaaaatcaaatcaaacttgcaaaattgaaaatcgcCTCAAGCTT
GCAGCAAAacgtaaaacaaaaaaaatactttcaaaaaaaattcaaaagtt
caaaaatctcgctgtttaaaaattcaaaacaggACGGCCCAACTCCTGGG
CATTATCTCGCTctctgaagataaaaaattcttGTTACTTGAACAAGTTG
CGCGCAAAAAAATCCAACGAGGGTTCTAAACCCTACCGTTATTCACTCAA
GCACTCGCAAGAGGAGTTCGACAACGACAACGAAAACGAAAAATGTAAAG
TCAAGTTCTCAAGTTCTTGTAAAAACgacagtaaaaataattttgcttcT
ACTAGCACAACACACAAAAACGCTCTCTTACTCTCTCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00067514-exon-scaffold_47-1491911889:1187..2174 | TCONS_00067514-exon-scaffold_47-1491911889:1187..2174 | Clytia hemisphaerica | exon |
| TCONS_00067514-exon-scaffold_47-1510915933:1187..2174 | TCONS_00067514-exon-scaffold_47-1510915933:1187..2174 | Clytia hemisphaerica | exon |
| TCONS_00067514-exon-scaffold_47-1575043694:1187..2174 | TCONS_00067514-exon-scaffold_47-1575043694:1187..2174 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_47 | supercontig | scaffold_47:1187..2174 . |
Blast
The following BLAST results are available for this feature:
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