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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00067508 ID=TCONS_00067508|Name=TCONS_00067508|organism=Clytia hemisphaerica|type=transcript|length=929bp
TTCTGTTTGTGAGTTTTTGTAAAACAACAGAAACAGATTTTCACTCCCGC
AAAAGGATTAGAGGACGCGACTAGTAGATTCCAGAGATAAGAGGTATAAT
CATCTCAGGAAATTCATTCGACTTCCAGGAAAGATGCGAACTCATTACCT
ACACATAACGGATTTGAGTAAGACAGACGTACACCAATGCGCATTGAGGA
GGTTTTCTCATCAATCACTTCATCCAAACAAAATCTCTAGCATCCCTGGA
TTGAATCCCGAGTTAAATCTAGAGAGTGAAGCAAAAAACCAGCCAACTAT
CTCCTCCTCTGCGTTCGTCCTACGAAATGGATACAAGAAAGTTCAAATAG
TGCAACCGGAGAGCGAGAAAGATGAAATCCCATTGGTCGATCAAATCATC
AATAACCGCCATTCGCAAAACAACATGAGACCTGATATTCTACCTGTCga
tgaaaaaacaaaactttattttgcGTATAATCGCAAGAATGGTACAATAT
CGAAAGTCATTGCCACCGCACCCAGACACGCGAAGACttttgctaaaaag
taaaatgatTTAATTGTGGTACTGTTGTGAATATTTACTTGGAAGAGTTA
TTTTTGATAGATAAAATTTTGCTCAAAGAAATCTAGGTTGCTAAGACTAA
AATGAATGCCAAAACTCAACAATGCAAAAACCAGAAAATTTGATAATATC
CCATAAGATAGGACTTCAGGAGTTATTTTCCCCCTCGGGTCAGATGTATT
AAACTGTTTCGAAATGGACGCGTGTTTTCCATTGAATGATATAGCTCACT
TATGTTTAGAGTCTAGAAGTATAGAAATATTCtgttaattgttaaatagc
TAATTTTACCTATTCTAAAGGTACaagaaatatataaaattgTAAACGAA
TCTGCATCTATATATAGTTTAGAAAAGCG Run BLAST on NCBI transcript from alignment at scaffold_47:473594..474815- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00067508 ID=TCONS_00067508|Name=TCONS_00067508|organism=Clytia hemisphaerica|type=transcript|length=1222bp|location=Sequence derived from alignment at scaffold_47:473594..474815- (Clytia hemisphaerica)
TTCTGTTTGTGAGTTTTTGTAAAACAACAGAAACAGATTTTCACTCCCGC
AAAAGGATTAGAGGACGCGACTAGTAGATTCCAGAGATAAGAGGTAAGTC
ATACTCGTTCTTCTCATTCAACTCGTTTATTGCGAGGCTGTAAGCCCACT
ATTGTGAAAAGGGCTGAGTTGGGAAATGCCTAAAACCTTAGTCCAATTTT
TAATTCCTGCTTGAAAGGAGGGCGTTATAGAATTCAATTAAGCGGACCTC
GGTCTATACCCTAAACGGTACCAATTCTTAAAAAAGTCAAGTCCAGACCG
ACTTAAGTCAAAATGGTAGTCGACAAGTTTTAATACTGTGTTTTTTTAGG
AAATCTGTATCGGTAAGCCTATACTTTCCTTCGTAGGTATAATCATCTCA
GGAAATTCATTCGACTTCCAGGAAAGATGCGAACTCATTACCTACACATA
ACGGATTTGAGTAAGACAGACGTACACCAATGCGCATTGAGGAGGTTTTC
TCATCAATCACTTCATCCAAACAAAATCTCTAGCATCCCTGGATTGAATC
CCGAGTTAAATCTAGAGAGTGAAGCAAAAAACCAGCCAACTATCTCCTCC
TCTGCGTTCGTCCTACGAAATGGATACAAGAAAGTTCAAATAGTGCAACC
GGAGAGCGAGAAAGATGAAATCCCATTGGTCGATCAAATCATCAATAACC
GCCATTCGCAAAACAACATGAGACCTGATATTCTACCTGTCGATGAAAAA
ACAAAACTTTATTTTGCGTATAATCGCAAGAATGGTACAATATCGAAAGT
CATTGCCACCGCACCCAGACACGCGAAGACTTTTGCTAAAAAGTAAAATG
ATTTAATTGTGGTACTGTTGTGAATATTTACTTGGAAGAGTTATTTTTGA
TAGATAAAATTTTGCTCAAAGAAATCTAGGTTGCTAAGACTAAAATGAAT
GCCAAAACTCAACAATGCAAAAACCAGAAAATTTGATAATATCCCATAAG
ATAGGACTTCAGGAGTTATTTTCCCCCTCGGGTCAGATGTATTAAACTGT
TTCGAAATGGACGCGTGTTTTCCATTGAATGATATAGCTCACTTATGTTT
AGAGTCTAGAAGTATAGAAATATTCTGTTAATTGTTAAATAGCTAATTTT
ACCTATTCTAAAGGTACAAGAAATATATAAAATTGTAAACGAATCTGCAT
CTATATATAGTTTAGAAAAGCG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00067508-exon-scaffold_47-1575043694:474723..474815 | TCONS_00067508-exon-scaffold_47-1575043694:474723..474815 | Clytia hemisphaerica | exon |
| TCONS_00067508-exon-scaffold_47-1575043694:473594..474429 | TCONS_00067508-exon-scaffold_47-1575043694:473594..474429 | Clytia hemisphaerica | exon |
| TCONS_00067508-exon-scaffold_47-1510915933:474723..474815 | TCONS_00067508-exon-scaffold_47-1510915933:474723..474815 | Clytia hemisphaerica | exon |
| TCONS_00067508-exon-scaffold_47-1510915933:473594..474429 | TCONS_00067508-exon-scaffold_47-1510915933:473594..474429 | Clytia hemisphaerica | exon |
| TCONS_00067508-exon-scaffold_47-1491911889:474723..474815 | TCONS_00067508-exon-scaffold_47-1491911889:474723..474815 | Clytia hemisphaerica | exon |
| TCONS_00067508-exon-scaffold_47-1491911889:473594..474429 | TCONS_00067508-exon-scaffold_47-1491911889:473594..474429 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_47 | supercontig | scaffold_47:473594..474815 - |
Blast
The following BLAST results are available for this feature:
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