TCONS_00067501 (transcript) - C. hemisphaerica

Overview
NameTCONS_00067501
Unique NameTCONS_00067501
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4309

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00067501 ID=TCONS_00067501|Name=TCONS_00067501|organism=Clytia hemisphaerica|type=transcript|length=4309bp
ATCAAATATTGCTACTGTTTGCGAGAGAAGGAAAATGTTATGAAATTATC
AGCTCGTTGAACACAATTCGGACCTATTTAAGAATCAAGTTATAACCATG
CTTAAATTTGCAACTAACTTAGCAAAGAAAAGCTCGCGAGATCTGACCTT
GAAACGTTCTCCAGAATTGACATTGAAAAGTTCGCCACCGGCAGATTTAA
CATTAAAAGGTTTGTCAGATCTAACTTTAAAGAGTTCTTCTTGTTTGAGA
AGTGATGCAGAAGCTTTTGCAGACCTATGCATGGAAGACGTGACCCCGAC
TTCTACTCCAGAAGCAGAAATTATTGATCTAACAGATCCTAAAGCATGGC
aagaaaggAACGATGTAACGGATGGTGCAGCCACACTAAAGCGTAAAAAC
AACAACTTGCCAAATTATGTGTCCTCCATATCTCAATTGAGCAAATTAAT
CAAGGAATATAATAAAGAATCATCATTAATAATGACCCTGCACGAAGATT
ATACATTCGATGGCTTCATACGAGTGCACATGAACTTGAGCAGACCTGTC
AACGTATCTTCAGATGTCAGCAATTTAACCCTCAAAAAGGCTGTCGCAAA
GAACAAATCCATGAACCGGAAATCGATATCAGACGTCTTCAACATCGACA
CCAACATCAAACGAAGGACGTCCACTAGTGATGATTCAGGGATTGGTTCC
CAGTCTTCCACTGCTTCGTCTACCATCTTCGCAAACGACCCTGCAACTCT
CATCCCTACGGGCTCAAGGAAAGGAAGGAGACCGTCTCGCCGTTTAAGTT
TCTACATGCCGAAAGGAACTTATAAACCGTTACACGTCACAAGCAAAACA
ACAGCCCGTGAGGTGATCGAAGCACTTTTAGCAAAATACAACGTTACGGA
TAATCCCAAGAAGTTCGCTCTCTATGAGAAACGGACCAATGAAGCACCTG
GAAGTCGTGAGAAAGAAGTGATGTACCGACGTATACCCGACGAAGAGAAT
CCTTTGGTGTTATGTTTATCATGGGGTGCTTCAAAAGATGGATCGCCAAC
TTTTGCTCTTAAAGAAAACGAAGATGGGAAAGTACAGTGGGAGTACTTCG
AACTTCCAGAGTTAAACAATTTCCTGAAGATTCTTCAACTGGAAGAAGAC
GAACTCATTGCAGGgGTCATGCAAAAGTATGAGAATTATCGTGAAGAGTT
GTGCAAAGCTTTAGAATCTAAATCGCCAGAGTCAACGGGGACTTGATAGA
GAAATTCTCTTTTTCAAATTGAGGTTAGGTGGAGATGAAAGGAGTTTCTT
TGAGTTGGTCATTCAAAATGTGAAAGAGAAGATTGATAAAGAGATATTCC
AGTAGAAATGAAGAGAGGGTTATGACGGCATCCCATCTGCTTCTGTGAGT
CGGTCAACCTTTTTCATAGAACATGACTGAATAATGGAAACCGTCAACTA
ATTGAATCAAACCACGGCATAACAACATTTTTATTGAATAGGAGAGCTGA
AGTTTGGTTTTGAAAACCGAAAATGTTTCGTtctgttattttttaaatat
ttttggtgacGAATATTCCCTTGTCTTGTCTTATTTGAAACCCCGAAACA
ATCCTAACTCCTAAGAGATGTTCATCTTTTggagaaaaataaaactttta
aaggtACTGTCTGAGGCTAAGAAAttaattaaaagattttataCCGTATT
TCAATTCCAAgataatgaaaattgaaaagattCGAAAAGTTTTCTAGACG
GATTATTTTTCATCCCAAAACTTCAAATTACAAGAGAGGGATATAGTAGA
CTAGGAATGGGAATAGAAAACCTCGGTTATATACTACACATACAATTTCT
ATACAGTAATAATTTATTCTTATcttttattagcaattgttttTGATGTA
GACGAAGGTGGATTATTTTTCATATGATATTTTTTGATAAGATTCACATT
TTTTTTGCGTTGttatttaaaaggaaaatttccCCTTCTAAATATTAAAC
TGATACAACAAATATAAGGAGAACGACATTTTGTAAATTAAGGAGCTGTA
AATATTCTAGTTTTCTGAAAAACAATTTTAACAAGAAATATATAGATACT
ATTTTATCTAAAGATTTACATATAATACGTGCTTAAAAAATTGTCCTTGA
GTAAGCCTATGTAGAAGTTTGAGACCTATTTTTAATCCATGATAAACTTC
GCATATGTCTAAACTTTTTGGGGAAACATTTTCGTTGTATTTCCTGTCGA
AATGACTTGGACCTCCATATGTAAACCAAAGGAGCCAACGCACTAGATGA
AAAACTTATCATTTTGATGGTAAACCTTGCGATCATCAAGTGTTTTTCAT
CACTTCTAGTCAAATAATTTCTTGTCATATTATCAACTAAGTAGAATATG
GCCATAGGTCCCCAACAAAGCAGGTAGGTGAACATGAAGGCCAACGACAG
TCTTGTTGCTTTCAACTCCATCGCGAATTGAAATGCACTTGTTTTTGAAG
CAGTTTTGGTAAGTTGTTTTCGTCTATATACCAGTGATGTCATCTCATAT
GAATTGTTTGATTCATTCGAATTCGAATCGTGAAAATACTTATCAACCGA
TCTGATTTTTTCTCGATCTAATTGATTCTCAGTGAAACTATTGACACTGT
CCCTTAAGCGCCTGTCATGTAACCCTTTACGGAAAGCTATCTTCCATATG
ACATAGTAATTACACACAAGTATAAAGAATGGAATGGTGTTGAAGATAGT
AATCACTGTCAAACTCCATACATATGTCGGTACATATCCACATCGCTCGT
TCGTTTCAGCTTTCATATAAAATGGCATGATGTCGATGATTGCGACAAAG
ATCCAAACAGACAACAAGATGACCAACATATTTCGACGATTGATGACTTT
ATTATACGTCATGGGACGTTTGATGGAATACAAACGATCGAAACTGACCA
CTAGTAGATTCAACTTCATCGCATGTCCACTGTAGAAGTAAGCGAACCGA
TATGTTGCGCAAACCCACAGATGATCATCCACAAATTTGGTGTGTAGGTA
TCGATACAGATATAATGGCATCGCAAATAAATCTTGAATGGCTGCTGCAA
ACATAAAGCTAATGATCGGGTAGTTTGGTAATATTCGCAGTTTTTCACTT
GACAACAACATGGTGATGGTAAACAGATCAAAAGTTACCATGACAATACA
TATCGGAACAATAATACCCAAACTCACTTCTTCACTATGGAAACCAAACA
GGGAATCGCTTGTCACGTTTGAGTTTTCGATCATTCTTTTGTAACTCAAG
ATAGCAATCGACCACCCTGGATATAAGTATCGAATTatgttgatttttca
agtttttcttttcacaCACCTCTTTTCTCTATTTCACGATGTTGTATACT
GGTCCTTCACACAGCTTTTATATAATGAACACGTAAAGCAATAgtgaaga
tttttttcattaaagtTTTATCAGCTTTTTGCATCTGCTTTAAAAGTTCG
TCCAAtcatttctttctttcattttatgatCTTTTTGCTGGCCTTGGAAT
AACAAAATATAACtttaatgaaaaacaaagaaatgtacgATCGACATTTT
GATGATAAGAGTATACCCTCAACCTCAAATATAAACTTTGATTTTTATTG
GCTCATCCAAAGCTTAGCACCCTCTACAACTAAACTAGGATTAGGATTTA
TTTCTGTAAATCATATCTAGACAGTATTTTTATATCttatcaaaaaagga
aaaagttaGTCGCCATTTTATACTGAAATGTAAAGTGCAAGCCCCCTTCC
TCCATCAGATAAGGAGGCCTGGTGGGTGGCGAGGGAATTGCgttagagtg
caaggtaccttcTCATACTCCAGTGTCATATCATGGTTTCCCTAACAAAA
ACTCATCCTTTATTTGGCCTGGTGGAATAAGCCCCCTTGGTACAAATTGC
ATTTATGATGCGATNAAGTGCAAGCCCCCTTCCTCCATCAGATAAGGAGG
CCTGGTGGGTGGCGAGGGAATTGCgttagagtgcaaggtaccttcTCATA
CTCCAGTCTCATATCATGGTTTCCCTAACAAAAACTCATCCTTTATTTGG
CCTGGTGGAATAAGCCCCCCTTGGTACAAATTGCATTTATGATGCGATTT
GAAATTCGATCGGCACTGTGCACAAGAAAACTTCCAAActgaagaaagaa
aatctaaaagatTTCCTTCTTCCTTGTTTAAAGTCAAATAAGAACACGAG
ATGAGTTATCAAAATCAACATAAATCTGTAAAAAAGAGCAAACACTTCAA
CCAttcttg
Run BLAST on NCBI

transcript from alignment at scaffold_47:404308..411076-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00067501 ID=TCONS_00067501|Name=TCONS_00067501|organism=Clytia hemisphaerica|type=transcript|length=6769bp|location=Sequence derived from alignment at scaffold_47:404308..411076- (Clytia hemisphaerica)
ATCAAATATTGCTACTGTTTGCGAGAGAAGGAAAATGTTATGAAATTATC
AGCTCGTTGAACACAATTCGGACCTATTTAAGAATCAAGTTATAACCATG
CTTAAATTTGCAACTAACTTAGCAAAGAAAAGCTCGCGAGATCTGACCTT
GAAACGTTCTCCAGAATTGACATTGAAAAGTTCGCCACCGGCAGATTTAA
CATTAAAAGGTTTGTCAGATCTAACTTTAAAGAGTTCTTCTTGTTTGAGA
AGTGATGCAGAAGCTTTTGCAGACCTATGCATGGAAGACGTGACCCCGAC
TTCTACTCCAGAAGCAGAAATTATTGATCTAACAGATCCTAAAGCATGGC
AAGAAAGGGTAATTATATGCTTTATCATTTGTGAATTTTATTCAGTTTTC
AGCTTATTTATTACAGTTCGCTCTAGTTTTATAGGTTTTCCTATTCAAAG
CAATTTAGTTCATTTCTTAAAAATTTTGATAGTTTAGTTTTGTATTTAAG
GTCTTTAAAGATAGTAGGTTTTCTCATTTTAGACAAAGATTTTTATTGGA
TGAAATGTTTATTAGATCAAGTGATTGATATGTAGTCTTTCTTAGCCAGG
GATTTTGGAGGATTTTTCGAGATTTTATAAAGAAACTCAATCAAAAAGAC
TTTTTTTCCTTTTTGTANATCAAGTGATTGATATGTAGTCTTTCTTAGCC
AGGGATTTTGGAGGATTTTTCGAGATTTTATAAAGAAACTCAATCAAAAA
GACTTTTTTTTCCTTTTTGTTAAACCAATATTGTGATCCTTCTGCGTTAT
CTACTATCAACTTCTTTTAGGGTATAATAACAGATGGGTTGTCCAAAAGT
CTGTGTCTGTCTGGATTTGGGATATTATTAAATTTCTTATTTTGATGTTT
ATAGAACGATGTAACGGATGGTGCAGCCACACTAAAGCGTAAAAACAACA
ACTTGCCAAATTATGTGTCCTCCATATCTCAATTGAGCAAATTAATCAAG
GAATATAATAAAGAATCATCATTAATAATGACCCTGGTACGTTTATTTCC
CATCAAAGCGCAATCAATTTCTTGATATTGGTCATGTACTTTGCCATTTA
ATATATAATTTTCAATGTTTTTTATGCGTAATTTTGAAACAATTTGATAG
TTTCTATTTTGATATATGCAGTTTGAAAATAGACTCTCTTTGATTGGTCA
AGTGGGTTAATTAGCGTCTAAGCAACTAAACCTGTTATGGTTCCTGGCAT
GTTGGGCACCCTGATCAAGCAGTTGTTTGAGGAAAGTTTTGATATGTTAC
TTCAAACATGATGTAGTCATTGCGTTCAAAAGAAGTCTGAACTTGATAAT
CCTTTTAATCTTTGATTGAAACTTTCCAACGTCTCTAAAGCTGCAACTCA
TTCCATTTTTCTGATGAAACTCATATTTAGGTTGTACCAGAATTATCCCT
CATGAAAGAAATCTTGCTTTTCTTCATTTTAGCACGAAGATTATACATTC
GATGGCTTCATACGAGTGCACATGAACTTGAGCAGACCTGTCAACGTATC
TTCAGATGTCAGCAATTTAACCCTCAAAAAGGCTGTCGCAAAGAACAAAT
CCATGAACCGGAAATCGATATCAGACGTCTTCAACATCGACACCAACATC
AAACGAAGGACGTCCACTAGTGATGATTCAGGGATTGGTTCCCAGTCTTC
CACTGCTTCGTCTACCATCTTCGCAAACGACCCTGCAACTCTCATCCCTA
CGGGCTCAAGGAAAGGAAGGGTAAATATTTGACTTTTAGAACCTTCACCT
TCCTCTACTCAATACAAGTTACTTACAAATCAATATGCTTTTCTCAAGTA
ACCTCGCATAACGAAATCATTTTTAAACTGTGGCAAGATTTTGAACACGC
TGTTGACGTCCTTATTCTCTTTACTTGTTCTTTTTTTACATATCAGAGAC
CGTCTCGCCGTTTAAGTTTCTACATGCCGAAAGGAACTTATAAACCGTTA
CACGTCACAAGCAAAACAACAGCCCGTGAGGTAATTTCAGCTTTTTCACA
CATTTCCGCATTTTAATATTTCTTTCTTCCTCGTTGGTGACTTATTCTTG
ATATGCGCAAGTCAAGATTACATCATTTTTTTCATATTGGAAACATCCGA
AAAAACAGGAATTTGACCCATGTGTTGCTAGTTTTGGTAACTCACTCACC
ACATTCTGGTGTTGTTTCGGGTGTTTCCGATAGGGAAAATCACGTAATCT
TGCCTTATGCATATCAAGANACACGCTGTTGACGTCCTTATTCTCTTTAC
TTGTTCTTTTTTTACATATCAGAGACCGTCTCGCCGTTTAAGTTTCTACA
TGCCGAAAGGAACTTATAAACCGTTACACGTCACAAGCAAAACAACAGCC
CGTGAGGTAATTTCAGCTTTTTCACACATTTCCGCATTTTAATATTTCTT
TCTTCCTCGTTGGTGACTTATTCTTGATATGCGCAAGTCAAGATTACATC
ATTTTTTTCATATTGGAAACATCCGAAAAAACAGGAATTTGACCCATGTG
TTGCTAGTTTTGGTAACTCACTCACCACATTCTGGTGTTGTTTCGGGTGT
TTCCGATAGGGAAAATCACGTAATCTTGCCTTATGCATATCAAGAATTCT
AAAGTTTACAACAGCCCCTGTGTCACAGGCCTGGTGGACCCCCCCCCCAC
CAACTGAAAAACTGAACTGAACTCTTTGCCACTTCGGCGATGATATTTAG
ATAGAGAATTACTGTTTTCAAAATTGAAGATGAAATAATCCGCTTTGACA
AAGTTTGACATTCATTTTTATTATTATAGGTGATCGAAGCACTTTTAGCA
AAATACAACGTTACGGATAATCCCAAGAAGTTCGCTCTCTATGAGAAACG
GACCAATGAAGCACCTGGAAGTCGTGAGAAAGAAGGTACTAAATTTTCAA
TGGGTCGACTAATGGATAAAATCAAAATGATAATCAATACATAACATTAT
TAAAGTCCACAACGATATCGTAGTGGCTTGAGTATAAAAAGGTCTCTCAA
ACTATTCATGATACAGATGTAGTTTTAGACGTCCCTTCATTCTTACCAAG
TTCAATTTAGATTTCTTTAACCATAATATAATCAATTTCTACTTCAGTGA
TGTACCGACGTATACCCGACGAAGAGAATCCTTTGGTGTTATGTTTATCA
TGGGGTGCTTCAAAAGATGGATCGCCAACTTTTGCTCTTAAAGAAAACGA
AGATGGGAAAGTACAGGTACGTCACGTCATTTTTGATGAGTATGAGGCAG
GGTTTTGTTTATATCTTGCTCTGTTATTGTTGGTGTTTCTTTTTGGCTTT
ATTTACTTTTACTCTGTTTAATCAATTCTACGTCATTTTTGGTTTCAGTG
GGAGTACTTCGAACTTCCAGAGTTAAACAATTTCCTGAAGATTCTTCAAC
TGGAAGAAGACGAACTCATTGCAGGGGTAAATAATTTTTGTTGTTCTTTA
TTATACTTTAGGCCTTTCATTCTACCTGTCACATACAATGTCTTTGATTA
TCAAAAATATTTGAATCAAAATATTCATAGTTTTGGTTATTTTCAGGTCT
TTGACCATCCTTGTTCATTTTTCAGGTCATGCAAAAGTATGAGAATTATC
GTGAAGAGTTGTGCAAAGCTTTAGAATCTAAATCGCCAGAGTCAACGGGG
ACTTGATAGAGAAATTCTCTTTTTCAAATTGAGGTTAGGTGGAGATGAAA
GGAGTTTCTTTGAGTTGGTCATTCAAAATGTGAAAGAGAAGATTGATAAA
GAGATATTCCAGTAGAAATGAAGAGAGGGTTATGACGGCATCCCATCTGC
TTCTGTGAGTCGGTCAACCTTTTTCATAGAACATGACTGAATAATGGAAA
CCGTCAACTAATTGAATCAAACCACGGCATAACAACATTTTTATTGAATA
GGAGAGCTGAAGTTTGGTTTTGAAAACCGAAAATGTTTCGTTCTGTTATT
TTTTAAATATTTTTGGTGACGAATATTCCCTTGTCTTGTCTTATTTGAAA
CCCCGAAACAATCCTAACTCCTAAGAGATGTTCATCTTTTGGAGAAAAAT
AAAACTTTTAAAGGTACTGTCTGAGGCTAAGAAATTAATTAAAAGATTTT
ATACCGTATTTCAATTCCAAGATAATGAAAATTGAAAAGATTCGAAAAGT
TTTCTAGACGGATTATTTTTCATCCCAAAACTTCAAATTACAAGAGAGGG
ATATAGTAGACTAGGAATGGGAATAGAAAACCTCGGTTATATACTACACA
TACAATTTCTATACAGTAATAATTTATTCTTATCTTTTATTAGCAATTGT
TTTTGATGTAGACGAAGGTGGATTATTTTTCATATGATATTTTTTGATAA
GATTCACATTTTTTTTGCGTTGTTATTTAAAAGGAAAATTTCCCCTTCTA
AATATTAAACTGATACAACAAATATAAGGAGAACGACATTTTGTAAATTA
AGGAGCTGTAAATATTCTAGTTTTCTGAAAAACAATTTTAACAAGAAATA
TATAGATACTATTTTATCTAAAGATTTACATATAATACGTGCTTAAAAAA
TTGTCCTTGAGTAAGCCTATGTAGAAGTTTGAGACCTATTTTTAATCCAT
GATAAACTTCGCATATGTCTAAACTTTTTGGGGAAACATTTTCGTTGTAT
TTCCTGTCGAAATGACTTGGACCTCCATATGTAAACCAAAGGAGCCAACG
CACTAGATGAAAAACTTATCATTTTGATGGTAAACCTTGCGATCATCAAG
TGTTTTTCATCACTTCTAGTCAAATAATTTCTTGTCATATTATCAACTAA
GTAGAATATGGCCATAGGTCCCCAACAAAGCAGGTAGGTGAACATGAAGG
CCAACGACAGTCTTGTTGCTTTCAACTCCATCGCGAATTGAAATGCACTT
GTTTTTGAAGCAGTTTTGGTAAGTTGTTTTCGTCTATATACCAGTGATGT
CATCTCATATGAATTGTTTGATTCATTCGAATTCGAATCGTGAAAATACT
TATCAACCGATCTGATTTTTTCTCGATCTAATTGATTCTCAGTGAAACTA
TTGACACTGTCCCTTAAGCGCCTGTCATGTAACCCTTTACGGAAAGCTAT
CTTCCATATGACATAGTAATTACACACAAGTATAAAGAATGGAATGGTGT
TGAAGATAGTAATCACTGTCAAACTCCATACATATGTCGGTACATATCCA
CATCGCTCGTTCGTTTCAGCTTTCATATAAAATGGCATGATGTCGATGAT
TGCGACAAAGATCCAAACAGACAACAAGATGACCAACATATTTCGACGAT
TGATGACTTTATTATACGTCATGGGACGTTTGATGGAATACAAACGATCG
AAACTGACCACTAGTAGATTCAACTTCATCGCATGTCCACTGTAGAAGTA
AGCGAACCGATATGTTGCGCAAACCCACAGATGATCATCCACAAATTTGG
TGTGTAGGTATCGATACAGATATAATGGCATCGCAAATAAATCTTGAATG
GCTGCTGCAAACATAAAGCTAATGATCGGGTAGTTTGGTAATATTCGCAG
TTTTTCACTTGACAACAACATGGTGATGGTAAACAGATCAAAAGTTACCA
TGACAATACATATCGGAACAATAATACCCAAACTCACTTCTTCACTATGG
AAACCAAACAGGGAATCGCTTGTCACGTTTGAGTTTTCGATCATTCTTTT
GTAACTCAAGATAGCAATCGACCACCCTGGATATAAGTATCGAATTATGT
TGATTTTTCAAGTTTTTCTTTTCACACACCTCTTTTCTCTATTTCACGAT
GTTGTATACTGGTCCTTCACACAGCTTTTATATAATGAACACGTAAAGCA
ATAGTGAAGATTTTTTTCATTAAAGTTTTATCAGCTTTTTGCATCTGCTT
TAAAAGTTCGTCCAATCATTTCTTTCTTTCATTTTATGATCTTTTTGCTG
GCCTTGGAATAACAAAATATAACTTTAATGAAAAACAAAGAAATGTACGA
TCGACATTTTGATGATAAGAGTATACCCTCAACCTCAAATATAAACTTTG
ATTTTTATTGGCTCATCCAAAGCTTAGCACCCTCTACAACTAAACTAGGA
TTAGGATTTATTTCTGTAAATCATATCTAGACAGTATTTTTATATCTTAT
CAAAAAAGGAAAAAGTTAGTCGCCATTTTATACTGAAATGTAAAGTGCAA
GCCCCCTTCCTCCATCAGATAAGGAGGCCTGGTGGGTGGCGAGGGAATTG
CGTTAGAGTGCAAGGTACCTTCTCATACTCCAGTGTCATATCATGGTTTC
CCTAACAAAAACTCATCCTTTATTTGGCCTGGTGGAATAAGCCCCCTTGG
TACAAATTGCATTTATGATGCGATNAAGTGCAAGCCCCCTTCCTCCATCA
GATAAGGAGGCCTGGTGGGTGGCGAGGGAATTGCGTTAGAGTGCAAGGTA
CCTTCTCATACTCCAGTCTCATATCATGGTTTCCCTAACAAAAACTCATC
CTTTATTTGGCCTGGTGGAATAAGCCCCCCTTGGTACAAATTGCATTTAT
GATGCGATTTGAAATTCGATCGGCACTGTGCACAAGAAAACTTCCAAACT
GAAGAAAGAAAATCTAAAAGATTTCCTTCTTCCTTGTTTAAAGTCAAATA
AGAACACGAGATGAGTTATCAAAATCAACATAAATCTGTAAAAAAGAGCA
AACACTTCAACCATTCTTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_042152XLOC_042152Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00067501-exon-scaffold_47-1575043694:410719..411076TCONS_00067501-exon-scaffold_47-1575043694:410719..411076Clytia hemisphaericaexon
TCONS_00067501-exon-scaffold_47-1575043694:410041..410172TCONS_00067501-exon-scaffold_47-1575043694:410041..410172Clytia hemisphaericaexon
TCONS_00067501-exon-scaffold_47-1575043694:409307..409594TCONS_00067501-exon-scaffold_47-1575043694:409307..409594Clytia hemisphaericaexon
TCONS_00067501-exon-scaffold_47-1575043694:409047..409130TCONS_00067501-exon-scaffold_47-1575043694:409047..409130Clytia hemisphaericaexon
TCONS_00067501-exon-scaffold_47-1575043694:408142..408247TCONS_00067501-exon-scaffold_47-1575043694:408142..408247Clytia hemisphaericaexon
TCONS_00067501-exon-scaffold_47-1575043694:407811..407929TCONS_00067501-exon-scaffold_47-1575043694:407811..407929Clytia hemisphaericaexon
TCONS_00067501-exon-scaffold_47-1575043694:407601..407678TCONS_00067501-exon-scaffold_47-1575043694:407601..407678Clytia hemisphaericaexon
TCONS_00067501-exon-scaffold_47-1575043694:404308..407451TCONS_00067501-exon-scaffold_47-1575043694:404308..407451Clytia hemisphaericaexon
TCONS_00067501-exon-scaffold_47-1510915933:410719..411076TCONS_00067501-exon-scaffold_47-1510915933:410719..411076Clytia hemisphaericaexon
TCONS_00067501-exon-scaffold_47-1510915933:410041..410172TCONS_00067501-exon-scaffold_47-1510915933:410041..410172Clytia hemisphaericaexon
TCONS_00067501-exon-scaffold_47-1510915933:409307..409594TCONS_00067501-exon-scaffold_47-1510915933:409307..409594Clytia hemisphaericaexon
TCONS_00067501-exon-scaffold_47-1510915933:409047..409130TCONS_00067501-exon-scaffold_47-1510915933:409047..409130Clytia hemisphaericaexon
TCONS_00067501-exon-scaffold_47-1510915933:408142..408247TCONS_00067501-exon-scaffold_47-1510915933:408142..408247Clytia hemisphaericaexon
TCONS_00067501-exon-scaffold_47-1510915933:407811..407929TCONS_00067501-exon-scaffold_47-1510915933:407811..407929Clytia hemisphaericaexon
TCONS_00067501-exon-scaffold_47-1510915933:407601..407678TCONS_00067501-exon-scaffold_47-1510915933:407601..407678Clytia hemisphaericaexon
TCONS_00067501-exon-scaffold_47-1510915933:404308..407451TCONS_00067501-exon-scaffold_47-1510915933:404308..407451Clytia hemisphaericaexon
TCONS_00067501-exon-scaffold_47-1491911889:410719..411076TCONS_00067501-exon-scaffold_47-1491911889:410719..411076Clytia hemisphaericaexon
TCONS_00067501-exon-scaffold_47-1491911889:410041..410172TCONS_00067501-exon-scaffold_47-1491911889:410041..410172Clytia hemisphaericaexon
TCONS_00067501-exon-scaffold_47-1491911889:409307..409594TCONS_00067501-exon-scaffold_47-1491911889:409307..409594Clytia hemisphaericaexon
TCONS_00067501-exon-scaffold_47-1491911889:409047..409130TCONS_00067501-exon-scaffold_47-1491911889:409047..409130Clytia hemisphaericaexon
TCONS_00067501-exon-scaffold_47-1491911889:408142..408247TCONS_00067501-exon-scaffold_47-1491911889:408142..408247Clytia hemisphaericaexon
TCONS_00067501-exon-scaffold_47-1491911889:407811..407929TCONS_00067501-exon-scaffold_47-1491911889:407811..407929Clytia hemisphaericaexon
TCONS_00067501-exon-scaffold_47-1491911889:407601..407678TCONS_00067501-exon-scaffold_47-1491911889:407601..407678Clytia hemisphaericaexon
TCONS_00067501-exon-scaffold_47-1491911889:404308..407451TCONS_00067501-exon-scaffold_47-1491911889:404308..407451Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_47supercontigscaffold_47:404308..411076 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0.375477	0.348578	0.451334	0.192961	0.335223	0.184217	0.391501	0.234936	0.38238	0.172461	1.9744	1.80384	0.93994	1.04192	1.35321	0.938587	1.48281	1.60067	1.9138	1.345	0.361059	0.759804	2.45149	1.69095	0	0	0	0.190334
Blast
[Close]
BLAST of TCONS_00067501 vs. Swiss-Prot (Human)
Match: RASF1 (Ras association domain-containing protein 1 OS=Homo sapiens GN=RASSF1 PE=1 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 8.175e-35
Identity = 95/267 (35.58%), Postives = 139/267 (52.06%), Query Frame = 2 
Query:  425 SISQLSKLIKEYNKE--SSLIMTLHEDYTFDGFIRVHMNLSRPVNVSSDVSNLTLKKAVAKNKSMNRKSISDVFNIDTNIKRRTSTSDDXXXXXXXXXXXXXXFANDPATLIPTGSRKGRRPSRRLSFYMPKGTYKPLHVTSKTTAREVIEALLAKYNVTDNPKKFALYEKRTNEAPGSREKEVMYRRIPDEENPLVLCLSWGASKDGSPTFALKENEDGKVQWEYFELPELNNFLKILQLEEDELIAGVMQKYENYREELCKALES 1219
            S +++ + IKEYN +  S+L M+L++D ++ GFI+V                L L + V+   S    S+ D         RR                               G  +G    RR SFY+PK   K LHV S+T AREVIEALL K+ V D+P+KFAL+E+        R  +V  R++ D+E PL L L  G S D + +F LKEN+ G+V W+ F +PEL+NFL+ILQ EE+E +  ++QKY   R+++ +AL +
Sbjct:  135 SQAEIEQKIKEYNAQINSNLFMSLNKDGSYTGFIKV---------------QLKLVRPVSVPSSKKPPSLQDA--------RR-------------------------------GPGRGTSVRRRTSFYLPKDAVKHLHVLSRTRAREVIEALLRKFLVVDDPRKFALFER------AERHGQVYLRKLLDDEQPLRLRLLAGPS-DKALSFVLKENDSGEVNWDAFSMPELHNFLRILQREEEEHLRQILQKYSYCRQKIQEALHA 340
The following BLAST results are available for this feature:
BLAST of TCONS_00067501 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
RASF18.175e-3535.58Ras association domain-containing protein 1 OS=Hom... [more]
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