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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00067495 ID=TCONS_00067495|Name=TCONS_00067495|organism=Clytia hemisphaerica|type=transcript|length=1730bp
CAAATCTAAAAACTTTCAACATCTGCTGACTCGGACTCGTTTTTAGGTAA
TTAATTACATGATTTGGATGCTGGAGgaataaaaaagtcattaaagtGGT
GGATTATCAGCAGTATAAAAGCAACAGAAGGGCGGAGAGTGAATGAAATG
CTGTCGCATGGCAACGGCCACCTTCTCAATGGCACTTCCCCGTTGATGAC
ATCGAGCAGTAAACCAGTTGTTTATAAGCTTGGTATTTATGGTTGGCGGA
AGAGATGTTTGTTCTTTCTCATCTTCTTGATTGCAATCGTCTCCATTATC
AACTTGGCCTTGATTGTATGGATTATGAGAGTTCAACAGTTCGGACTGaA
CGGTATGGGCAAACTTGAAATAACGAACAAAGGTTTACGAATGGATGGAG
TTGCTGAGTTTACTGAAGTTTTGCGTGCCAACAAGATCACGAGTCGAGAT
AACTCACCTCTTCGCATCAGTTCACGGCGAAATTTATCACTATCAGCTCT
GGACGAACACGGCAATGTGGTTGGTCAAATCAATATCGATAACAACCAAa
tcattttgaagaacaaaCAACTTCATATTCAAGATCGTAAAGGAAGAACC
TTGTTGTATGCCGATGAGAAGAAAGTCAAACTTGATCTTCAGAACATGGA
GATTTCAGTTCCTGGAGGATTAAAGCTCAACGAATCTGTACAAACACCGC
TCGTTCAAGCACCGGAGAATGGCAACTTGAAGTTGGAATCACTTTCTAAA
GGATTGCATATGAACGCACCGCATGACATCGTGGTGGATTCGTACGGTGG
GAACCTGAAGATGAGCAGCCTCTCTGATATCATGTTCACATCTAAGAGCG
GAAAGATTTTGTTGGATACAAGCAAGGTCGAGTTGAAGAACATTCCTCTC
TCTTCCATTCCTGGCAAGCTGGATGGGAAAGTGTACGCTGACGTATCGGA
AGTTTGTGTTTGCAAAGATGGCACCATCTTCTTGGCACCCGCAGACTCTA
AACTACCATGTAAAGTTACTGCTGGCGTGTGTCCTCCTTGAATGGAATGT
GTTCACATTTGGGTAAAGAGAGAAAGGTGCTATGTGTAATAAATAGTAGA
TTCCGAGAGACACTTTACAAGAGGATCCGAGTAAGCGATTGAATATTATG
CTACCGATGTCAAGACATCTCCTCACCTAATATTGCATGGATGCCAGAGA
AACGGCTACACAAGCTTAGGAGCATATTATATTTGANATTTCCTCACCTA
ATATTGCATTGATGCCAGAGAAACGGCTACACAAGCTTAGGAGCATATTA
TATTTGAAGATCTAAGAAGGGAAGATTTTGACGAGCTTTATCCCACACTT
CTAACAGCAATATTCACGTCATATCTGGTCAAAAACACTTGGAACTCTGT
AAGGAAATGCAAGATTATTTTAACGTAACTTAATtaacaaacaaaaattc
aattttggtTTTACAAGAAGGAAGACAAGATGTAATTTTAAAATGACTAA
CGACCGTTGTTCAATGGTTTTATCTACGACCGTAAAAGTTATTATCGAAT
TGCCGACAATCATTTGGTAATCGTTATATTATAAGTATATTATATTGTGT
GAATAGTGTAAGATaatatgttatttttttatgaattgatTTCTACATTA
CTTGTAGAGCgaatgtaaatatcatatttatttCCCAAAGAAATGGAGAA
AAACATCAAGACAATAAACAGTATGAAGAC Run BLAST on NCBI transcript from alignment at scaffold_47:351882..362154- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00067495 ID=TCONS_00067495|Name=TCONS_00067495|organism=Clytia hemisphaerica|type=transcript|length=10273bp|location=Sequence derived from alignment at scaffold_47:351882..362154- (Clytia hemisphaerica)
CAAATCTAAAAACTTTCAACATCTGCTGACTCGGACTCGTTTTTAGGTAC
GATAAAGTCTTTAGATTGTTTTACCCTTTCTATATTCTGAATTTCAGCTC
AACGTTGCCGTTAGTGTAGAATCTATGGGGCGATATTTTCGTGAAGAGAG
CTGATGAAATTCAAATGAATATAATACCAATATTTCCATAGAGACTATGT
TTGATTTTAACACCAAGGGATGAAAATTTACTAACTAATAGTTTAAGCAA
ACTGTTTGTTAATTTTACAAGTTTATTTCTATACTTTTGGCAAGTTTAAA
ACAAAATCCCAGCTGATAATCTGTTTTCGTGTTTGGGTTGTAGTGTTTTG
AATTGTTGATTGAGCTTGTTTGGATTTTATGAGTTTTCATGAAATTGGAG
TCTGTTTTTTATAGCGAGAATCGGAACTCCTATCGTGTCCGTTTTGAATG
GGCGTACTTTTCCGTTTGGATTTATATTTGTTTAAAGGGGCTTATGTTAT
TTTCGGGATTGGAAATTTCTCATGATGATATTGGTTGTTTTTTTCTGAAT
GAAATTGAGGTTTTGCAAAACACTTGAACTGTTATCAGTTCATCTCATTT
CGTTTTCATTCTTTTTCTTGATGAACTTAAAGGATTTTGGTATTTTCGTT
AAGATGCGGTCCCTTTTGAACCTTCTTTAAAGCATACTTCATATTAATCA
CATTAATAGCATCAAGGGGCTCATAATGTAAACTAGCCCTTCAAATACAT
ACTGAAAAATTAGTTAAGGGTGCNTTAATCACATTAATAGCATCAAGGGG
CTCATGATGTAAACTAGCCCTTCAAATACATACTAAAAATTTAGTTAAGG
GTGTAGTTTCATTAGACCCCTCTGTTTCACTGAACTATTTACTTTATAAA
CATCCAGTTTTCAAACTTGTTGCTAAAAACTTTGTATTTGTTTAGCGTTC
TGTTTCGAAAAAGTCTACTTGAAAAGAATTAAAGATTTAATCTTTTCCTT
GACATTTTTCATCTGCAGAAAGAGGGTTTTCCTTCCATTTCACATGCTGA
AGCTTGAAAAGATCCATATGAAATATATTGTGTTACAGAAAGACGCTTGT
TAGAGCTGGGTGTAGACTCGTTAGTTTGTCTGTTTGAGATTTGGATCTTT
TTTTTTCAATTTTTCCTTATTTGCTTTGATATGTTCGTGATGCTTTCACG
TGGTTCGCCTATTCTTATTCACGTACGTAAAGATTCCACGAGTTACTCAT
TTCAGACCCGTCGTTCTTTACAAATGGTTGGTATAGTATGATGCTTGTTG
AATGTAGCTTTTAAGAAAAGACGGGATGATAGCTAAGGAAGATGTTGCTA
GTTTCTGTTTTATTTACAGAAAAAGTGTACTGTAGCTAAGTTCTGGAATA
TTGGTGCTCTCGTTTTATACTTTACCATGCTTTCTTTAATTTTGAAGTCT
TAACGATCGGCAACTTTCCAAACTTTCCATTCACAATATGAAACAAAGCT
CTGTACTATTGATAGGGAATCGCCTGATAGTCCACAAAGAAGGAGAAAAG
AACAAAAAGAATTCCTTCTAATGTTTCATGAGGAAAGGGGGTGACGACAA
ACCGATATCCTTCCTCTATCTCCGTTAATCCATAACAAGAAGTTAAACAA
ATACAGACAACGAGGAGCCTACTCCATTCTTCCACTTCCATAAGCTTCTA
AGAGTCTACTACTTGTTTTTGTGTCTTTTCTCTTTGAATAAAAATTGGAA
GGACCTTCGCTATTGACAGTTGGATATAAACGAGTGCTCTGTATGAAGAC
GAAGTCGAGGAATAGTGCGAAAAATTAAATTTGCTTTTCACCTTAACATT
ATTGCATGGACATACTTTATATCATAACATTTCTTACATCAATTGCACTA
TTTTGTGGTTATGTCACTGTTGCATTGACACGAGGTTTGCAATTTTGGTA
TTGGTATCAAAATAAGCTCGTTAACTTTCTCATTAAATGAAGGCTAGTTG
CTAATGAGAATATGGAAAGGAAATTGTTTGTCTTTCCTTTTTCCATGTAT
TTTTATCATCATCAACCTCGTTCCTGTATATAGTCTCTTGTGATGTGATA
TCGGAACCTTAAGACTATAAATAATACATTTACCAGGTAGCCAGGTAAAG
GTGAAACTGGCGAAAATCATACAATCAAAGTTCGTAGACTTTGAAGTGTA
TAATGAAATCATCATGTGGTTGTGTCACTGTTGTGTCATCATTCCAGTGC
CAAAATGTTTGTAGTTGTAGTAACCTACTCAACGAATGAAACAGCACATA
CAAATGGCATCATTAGAAGATCTTAATATATCATTTATAGAATTAATGTC
ATTTTAGTGTCAAAATGAGGCTTTATTTATCAAAGCGACAGTTTTGTACG
TAGCACATTGGCATCGTCTTTATAATGCGTATACACTCAGATAGTAGACT
GGGAATCCAGTCGTTTATAACGTTTTTGTTGAAAGCGGGAAATTTTTATG
TCGGTATATGGTTAAAATAAACGACTGGGCTAAGGTGGTTTCCGTAGCTT
ACGGGAGTTCCAGCAGGGCCCGCAGATTTCTGCGGGGTGAGAAAACAATC
ATATACAACAAAATATATAAACAAATAAAAATTTCAACCAATGAGAATTT
CTAAGTGAAAGAAAAAAAAACCAAACCAAAACAAACCAACAAGACCCCTG
AAAATGTTATCCAAAAACATGAANTTTATAGAATTAATGTCATTTTAGAG
TCAAAATGAGGCTTTATTTATCAAAGCGACAGTTTCGTACGTAGCACATT
GACATCGTCTTTAATGCGTATACACATAGATAGAAAAGAGCTGTCTTTTT
ATTTCGATAGAAAGCGAGGGAAAGAGTTGAAAAGGACGCATTACGGAAGC
ATATAAACGTCATAAGAACAATACACAAGGAGATGTCACCAATGACTTTA
ATAGTTTCCTATTTAAAGAAAAGAAAAACATTTAATGCGCTGCTACCTGA
TCCTTTAATAATGATGGATGTGAAGGAAAGGGAGAGATGTATTTTTGGTT
GATTGTATTATATCGTGTAGTAAAGAAAGCAGTTTGGTAATATGTGGTTG
ATTAGCTATTATCATTTCGTTGTCTCGCACTATATTGATTGGAATTGTCA
GTGTTTTCTTCAAGTCCATGAGTTACAGGTAGTTTAGAATATTGGAATAG
TGTTGACTTTTGTACTATTAGTAATAGTATTACTTATCTATTAGTGGACA
AGGCAGATGTTTTATTTAGATGTGCAATTTTTTAGCCTAATCGTGGTAGC
GACATCTTTGCAACCTTAAGGCTCAATTTTAATCCTCTCATATTTAAGTT
TATGATCGAAATGATATGATATATTGTGTTACATTCGTGTTTGCCGAGCC
TGCGGTAGCTTGCATGACCGAAAAATATCTTTTGTTATTAATACGAAAGT
CTTACACCGCATTGTTACAAAGCCTTTTCGTATGTCTGTGTTTAAGATTT
CGTGAAATGGCGGTCTTTAAGCACCGTAAAACCATGCTAAAACCATGCTA
AAACCATTTCAAGAATGGTGTAAAGGCTTTCAAAATATTGGTTATAATTT
CTATAGTAGACGGTCTTTTGCGAATAAACTTTCCTTGATACTTACCAGTT
TTGTTGTATGTTTTTTCATGGTTACAAGTCAACAACAGAGCGACTGCATT
TGATTGATTGCAATATGTAAAGGATAAAATCCATTTGCATGCTCAAATCT
TACTATTAGTTTTATAGTTGGAGGACAAGAAGTGGTGTTTGGAGCTTGGA
GATGGATTTCTCTCACTTTTTCTGCCCAGTCAACAGATAAGGATTCCCTT
CTAGCTCTACCCAGCAGTACTTAATACTTCTTGACCTCCTTACCGACCTG
TAGTTTTAAGGTAGTTAAATACAAAGGTCAAATAGTATCTTCTGAGTTTG
AGATGCCCATCAATTGATTTTAGAACAATTTCATTGTTGAACCTTAAATG
TTGGTCTTCTCTGAGACGAGTTCAGTTTTTCCCTCTCACTCTCTCACTGA
CATGTTTTGGTCATCATTTCTCAGACATCATTAAATTCGTTTATGGTTAA
AAAAGAAACGCGCAATCTCTTATCGAAATCTTATTTGAAATGTTATCTTA
CGTTCGCATGTCAAAAAGACCTTCTTTTGCAAGTCAGCTTATCTCAGTGA
TAAGTCAAGTTTGATCATTTAAGTACTTGACAGTACTATTTCACTGAAAC
ATCATCTTGACGTTTGAAGTGTTTATGCGTAGTGTGGCTTTTTTTACATT
GTAACCTTCTAATGAAATTGCGTTTGTTTGTTTGTTTTGAGAGAGAAACC
ACCTCTGGTTGGAAAAGCTAATAGTCTGGTAAGATCTACCCAAAACAATC
ATTGGCATAATTCTTAATTCTCACTAATCAGGAATTACAATTGATGTTTG
AAATTGCATGTTTAATCTCTAAAGATGGATCTTTGGATGGTTTGATTTCA
GTGAAAAAAAACTTTGTTTTGATTGCATCAAAAGTGCATTGTAACGCAGT
CAACAAATTCATGCTTTTCAACACGAGAAAAAGCTACAGTTTATACAAAT
TGGGTGTAAAATAGTATGGATGAAATGATATGGCTCTATTGAACAACTTG
CGATATTTCTCGCATTACTGGAAGACAAATTTCTTTTTATAAGAGGTGAC
AACGAGGTGAATTGTGTCTTTTAACATGTTTTTCTTGTCGCCAACTCCTT
GCGTGTGACAAATGAGCCTCACCATTCTTGTAGCAAGACATGTCCTGTGA
TTACGTACGTAGTACACACGTCAGTAGTCAGTCAGTCTTTGGATGTTTAT
GATGTTATTTCTTCTTGCCAAGTTACATGTAGCAACACTTGGCATCAGAC
ACCATCTCGGTGATCGAACAGTTAGAATTCAGTATACTTGTATCATTGAC
GTTTAATTACTTAAAATATGATGACAAATGTTTTCAAGCAAGGATGTTCT
CAGCTTTATACATCATCCAGGAAAAATTCAACAAAATATACTGTGACTTT
TTGGTTGAACTCATTGTAAAAAATTGCAATCTGTTAAAACTTTTAGCATA
TCGAACTAAATTACTAAAATTGCGGTTTTTTGCCTCTCTTTTGATGGTAA
TTTGTGCACCGTAACTTTGCGGTTGAATTATCTCCTCCTTTGTCTGTGTA
GTTAAAGAAGTAACGCCTTTCCTTAATCTCTTATCCCCTCCCCATTTCTT
TTGCTTTCCACAGGTAATTAATTACATGATTTGGATGCTGGAGGAATAAA
AAAGTCATTAAAGTGGTGGATTATCAGCAGTATAAAAGCAACAGAAGGGC
GGAGAGTGAATGAAATGCTGTCGCATGGCAACGGCCACCTTCTCAATGGC
ACTTCCCCGTTGATGACATCGAGCAGTAAACCAGTTGTTTATAAGCTTGG
TATTTATGGTTGGCGGAAGAGATGTTTGTTCTTTCTCATCTTCTTGATTG
CAATCGTCTCCATTATCAACTTGGCCTTGATTGTATGGATTATGAGAGTT
CAACAGTTCGGACTGGTGAGTTCTTCGTTTGTTTCATTCTTCCCTTTTTC
ATTAACGACCCTGCATTTTGGAGACTCGGTGAGAGTTGAAATACTCAGTG
TCGAAGATCTTAGGACCCAGGGGCCATTCAATCCTGAATGGAAACGTCAT
CTTTCTAAGCAGCTTTCACCTTTTTTATGTGATAATCCGCCCCACTACTG
ATTGTATTCATTTATCAAATTGTACACAACCCCAATTACTACACAAAAAT
ATATCCATATAGTATTGTTTATTCAAAAACTTTACACAACCAATTTAGCC
AATCAATTTGTTTTTTAATAGAACGGTATGGGCAAACTTGAAATAACGAA
CAAAGGTTTACGAATGGATGGAGTTGCTGAGTTTACTGAAGTTTTGCGTG
CCAACAAGATCACGAGTCGAGATGTAAGTCACTCATTGTGTTTATTATAA
GAAAAATTCCGCATCAAAAAGCACTAATGCTGAGAATTTCTCTCACTAAC
GTCCTCACAGAAGTATAGGTACCCTTGCACAGAGTGCATTATCGCTGTAT
CACATTTATATTACATCTTGACGACCATAATTAGATGTTATTTTTATAAC
ACGTCTACTATAAATATCTTTTTACGATAACAATAATTTCTCAACAATGT
TGATGTGGTGAACCGACACACGAGCGTCATCAAGTACCCATATGGTATTA
CTTTCACTACCAAATATAAGCATTTGAGATATCTTCGGGAGGATAATCAC
GTGTCTTAAAATCCAATCTTTCCCTTTTATCAACCATACCGGAACTAATG
ACACAATTGAATTTTCATTCAATATTGCAATTTTTTGACGGTGATTTTAT
CATAAGGCCCTTTGTAACACAATTTGTTGCATCGACACTGTTGCCATTTT
CACTTGGACATTCTACTTTTATGCAATGTTATTGCTGAAATTTCTCTCCT
TTCAGTTTAAATGTTTTAAGGTGTTTTAATAGAAGACAAGAAGCCCAAGG
GCATGAAGGCCCAGCATTAAAAGTTTTGTTTCTAAATAAGAGTGTATAAT
TTACAAGCTTTTTTATATTGAATTGGCACGAATGTGGAGCAAGATTGGTC
AGAAAGAGGAAGAGAAAAACATTTTTTTGCTTATATTAGCACAATATAAC
AAACTGATATGAAACATGTGTCTAACATGAAACGGGAAAACTTATTTATG
TAAAAATAAAACTTTTGAAAAATCTTTAACAAACATGATTGTGTTTAAAA
GCTCTAACTAAAGGGAGCAAAAACAAATGATAAAAAGTAAAATTAAAAAG
AAACTAGCCTCGAAAAAATTTTCCCGCAACCACAGCGGCTGCAACCTCAA
CAGCAGCACTCAAAAAATGCAAAATTTGTATATAAAAAGGTCCATAAAAA
CTGAACAATTTGGAGTTATTGGCTGAAATTTTGTACAGTGACTCACTTTC
AGATGCAGATCATAATTTAATAAGTGTTTTTCCCAAAATGAGGCTATTTC
AAGATGGTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGAGAGAGG
ACAGAAAAACAGAACACGGCACGGACTGCGGACAGACAGGACAGGACAGA
CACACGGAAAGTTCCTCTTGAAAGGCCCCTTCGCTAGCGCTGGGCCAACA
ACCATAGAGGCTATGGAAGAGAGCTGTTTCTTTTATAGATTCTTTTCAAA
TGTAATAATGAAATAAAAGATACGAATTTCTAATTTCAGAACTCACCTCT
TCGCATCAGTTCACGGCGAAATTTATCACTATCAGCTCTGGACGAACACG
GCAATGTGGTTGGTCAAATCAATATCGATAACAACCAAATCATTTTGAAG
AACAAACAACTTCATATTCAAGATCGTAAAGGAAGAACCTTGTTGTATGC
CGATGAGAAGAAAGTCAAACTTGATCTTCAGAACATGGAGATTTCAGGTG
AATTGCACAAACTCGTTTCTACACGTTTTTTTTTATAAGAACAAGCTAAG
AACATTTTAAGGCTTTGCAGACTCTAAAACACCTAGTTTCTTAGGAAAAT
TTACGAAAATGCTCAAAAAAGGTGAAAATTGACATGTTAAGAACTCTTTT
AGGCTTGAAACTCAAAAAGTTAAGAACATCCGAGGGCTTCAATAATTATG
GATGCTCTTATAAAAAATCTCTTATCTCTCTCCTAGAACTTTACTGCAAA
GCACGACACACAATAGTTAGTTCAATCAGAAACTAAAATACATACTGCTG
CATTAGAACGGAAAGCACTTGATAGACGTCTAGGTCCTATTCACAAGGTC
AATTTCTTAATGTCTGCATTTTAGTTCCTGGAGGATTAAAGCTCAACGAA
TCTGTACAAACACCGCTCGTTCAAGCACCGGAGAATGGCAACTTGAAGTT
GGAATCACTTTCTAAAGGATTGCATATGAACGCACCGCATGACATCGTGG
TGGATTCGTACGGTGGGAACCTGAAGATGAGCAGCCTCTCTGATATCATG
TTCACATCTAAGAGCGGAAAGGTGAGACGAATTTATGACGTTAAGTTCTC
TCATAAGTGAGCCTCAAAAATAAACAAGTACACAGTGGTAGAGGGTCGAG
AGCGGAGGGACCATTGTTTTTACATTAACTTTCTCTGGTCGTTTCAGTTA
ATCAAGCCTTTTCTGCATCAAGGAATCATTTTCTCTTTCTTTCCTTAGAT
TTTGTTGGATACAAGCAAGGTCGAGTTGAAGAACATTCCTCTCTCTTCCA
TTCCTGGCAAGCTGGATGGGAAAGTGTACGCTGACGTATCGGAAGTTTGT
GTTTGCAAAGATGGCACCATCTTCTTGGCACCCGCAGACTCTAAACTACC
ATGTAAAGTTACTGCTGGCGTGTGTCCTCCTTGAATGGAATGTGTTCACA
TTTGGGTAAAGAGAGAAAGGTGCTATGTGTAATAAATAGTAGATTCCGAG
AGACACTTTACAAGAGGATCCGAGTAAGCGATTGAATATTATGCTACCGA
TGTCAAGACATCTCCTCACCTAATATTGCATGGATGCCAGAGAAACGGCT
ACACAAGCTTAGGAGCATATTATATTTGANATTTCCTCACCTAATATTGC
ATTGATGCCAGAGAAACGGCTACACAAGCTTAGGAGCATATTATATTTGA
AGATCTAAGAAGGGAAGATTTTGACGAGCTTTATCCCACACTTCTAACAG
CAATATTCACGTCATATCTGGTCAAAAACACTTGGAACTCTGTAAGGAAA
TGCAAGATTATTTTAACGTAACTTAATTAACAAACAAAAATTCAATTTTG
GTTTTACAAGAAGGAAGACAAGATGTAATTTTAAAATGACTAACGACCGT
TGTTCAATGGTTTTATCTACGACCGTAAAAGTTATTATCGAATTGCCGAC
AATCATTTGGTAATCGTTATATTATAAGTATATTATATTGTGTGAATAGT
GTAAGATAATATGTTATTTTTTTATGAATTGATTTCTACATTACTTGTAG
AGCGAATGTAAATATCATATTTATTTCCCAAAGAAATGGAGAAAAACATC
AAGACAATAAACAGTATGAAGAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00067495-exon-scaffold_47-1575043694:362109..362154 | TCONS_00067495-exon-scaffold_47-1575043694:362109..362154 | Clytia hemisphaerica | exon |
| TCONS_00067495-exon-scaffold_47-1575043694:356590..356891 | TCONS_00067495-exon-scaffold_47-1575043694:356590..356891 | Clytia hemisphaerica | exon |
| TCONS_00067495-exon-scaffold_47-1575043694:356182..356283 | TCONS_00067495-exon-scaffold_47-1575043694:356182..356283 | Clytia hemisphaerica | exon |
| TCONS_00067495-exon-scaffold_47-1575043694:353508..353715 | TCONS_00067495-exon-scaffold_47-1575043694:353508..353715 | Clytia hemisphaerica | exon |
| TCONS_00067495-exon-scaffold_47-1575043694:352934..353130 | TCONS_00067495-exon-scaffold_47-1575043694:352934..353130 | Clytia hemisphaerica | exon |
| TCONS_00067495-exon-scaffold_47-1575043694:351882..352756 | TCONS_00067495-exon-scaffold_47-1575043694:351882..352756 | Clytia hemisphaerica | exon |
| TCONS_00067495-exon-scaffold_47-1510915933:362109..362154 | TCONS_00067495-exon-scaffold_47-1510915933:362109..362154 | Clytia hemisphaerica | exon |
| TCONS_00067495-exon-scaffold_47-1510915933:356590..356891 | TCONS_00067495-exon-scaffold_47-1510915933:356590..356891 | Clytia hemisphaerica | exon |
| TCONS_00067495-exon-scaffold_47-1510915933:356182..356283 | TCONS_00067495-exon-scaffold_47-1510915933:356182..356283 | Clytia hemisphaerica | exon |
| TCONS_00067495-exon-scaffold_47-1510915933:353508..353715 | TCONS_00067495-exon-scaffold_47-1510915933:353508..353715 | Clytia hemisphaerica | exon |
| TCONS_00067495-exon-scaffold_47-1510915933:352934..353130 | TCONS_00067495-exon-scaffold_47-1510915933:352934..353130 | Clytia hemisphaerica | exon |
| TCONS_00067495-exon-scaffold_47-1510915933:351882..352756 | TCONS_00067495-exon-scaffold_47-1510915933:351882..352756 | Clytia hemisphaerica | exon |
| TCONS_00067495-exon-scaffold_47-1491911889:362109..362154 | TCONS_00067495-exon-scaffold_47-1491911889:362109..362154 | Clytia hemisphaerica | exon |
| TCONS_00067495-exon-scaffold_47-1491911889:356590..356891 | TCONS_00067495-exon-scaffold_47-1491911889:356590..356891 | Clytia hemisphaerica | exon |
| TCONS_00067495-exon-scaffold_47-1491911889:356182..356283 | TCONS_00067495-exon-scaffold_47-1491911889:356182..356283 | Clytia hemisphaerica | exon |
| TCONS_00067495-exon-scaffold_47-1491911889:353508..353715 | TCONS_00067495-exon-scaffold_47-1491911889:353508..353715 | Clytia hemisphaerica | exon |
| TCONS_00067495-exon-scaffold_47-1491911889:352934..353130 | TCONS_00067495-exon-scaffold_47-1491911889:352934..353130 | Clytia hemisphaerica | exon |
| TCONS_00067495-exon-scaffold_47-1491911889:351882..352756 | TCONS_00067495-exon-scaffold_47-1491911889:351882..352756 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_47 | supercontig | scaffold_47:351882..362154 - |
Blast
BLAST of TCONS_00067495 vs. Swiss-Prot (Human)
Match: SGCD (Delta-sarcoglycan OS=Homo sapiens GN=SGCD PE=1 SV=2) HSP 1 Score: 163.696 bits (413), Expect = 2.171e-45 Identity = 96/280 (34.29%), Postives = 163/280 (58.21%), Query Frame = 1
Query: 196 MTSSSKPVVYKLGIYGWRKRCLFFLIFLIAIVSIINLALIVWIMRVQQFGLNGMGKLEITNKGLRMDGVAEFTEVLRANKITSRDNXXXXXXXXXXXXXXALDEHGNVVGQINIDNNQIILKNKQLHIQDRKGRTLLYADEKKVKLDLQNMEISVPGGLKLNESVQTPLVQAPENGNLKLESLSKGLHMNAPHDIVVDSYGGNLKMSSLSDIMFTSKSGKILLDTSKVELKNIPLSS-IPGKLDGKVYADVSEVCVCKDGTIFLAPADSKLPCKVTAGVC 1032
M S P VYK+GIYGWRKRCL+F + L+ I+ ++NLA+ +WI++V F ++GMG L IT KGL+++G +EF + L A +I SR + L S RN++++ L++ V+ Q+ + K+ ++ G+ L AD +V + + + + G +S++TP V+A L+LES ++ L M AP + +++ GN++ + +++ SK G+I LD +K+ L +P S P KV+ E+CVC +G +FL+ A + C++ VC
Sbjct: 13 MPGSVGPQVYKVGIYGWRKRCLYFFVLLLMILILVNLAMTIWILKVMNFTIDGMGNLRITEKGLKLEGDSEFLQPLYAKEIQSRPGNALYFKSARNVTVNILNDQTKVLTQLITGPKAVEAYGKKFEVKTVSGKLLFSADNNEVVVGAERLRVLGAEGTVFPKSIETPNVRADPFKELRLESPTRSLVMEAPKGVEINAEAGNMEATCRTELRLESKDGEIKLDAAKIRLPRLPHGSYTPTGTRQKVF----EICVCANGRLFLSQAGAGSTCQINTSVC 288
The following BLAST results are available for this feature:
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