|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00067453 ID=TCONS_00067453|Name=TCONS_00067453|organism=Clytia hemisphaerica|type=transcript|length=2682bp
GTGAGAAAAAGGTTCAAGAACTTTAATAAGTTAAAAATTTTACTATTTCt
ttcaaattcttattttagAATGTCTATCCTAAAGTGAACTCACAACTTTA
TCGTTTTTGCTGCACTTCTTTTACAAACAATTAAATGCTATACCTCAAAG
TACCATTTCAAATTCGGCCATGCTTGAGGCCGGACGNCCCATGCCGGACG
TcgataatatttttattttttaattattgttTGGAGAATTTTTGCTATCA
ACTGACCGAATCAAAGCATTGGATTTTGCGCCCTNCATGGCAGTGCCTTT
ACGGCCAATCACAATTTTAGCTTCTCAAATCTAAAATCAGCCTCTCAGAT
TTGGAATTCGGCTTCTCAGATTATAATTTCAACTTCTNTATGGAATCCGA
AAGATAAATCTCCAATCAAAATTATAAAGATGTCATTATGGAGATCAGTT
TTAACGAATTCTCTCTTTAGcaCACAGTCAAAGTGTTTATTGCAAGGGAT
GCGATGTGCAAGTTACTTTTCTGTTGCAAGAGAACGCATTGGGAAATCAA
CTACAGAATTGAAGAAAGAGCAGCAAGTCATCGCTCCCACTCTTGTTGAA
GTTCCTAATTGTAGAAGAGATGTCAGAATCAACCCCAAAAAGATGCTTGC
AGTCGCTAATCTGGTTTCACGGATGCCAATCGATGAGGCTATAGTTCAAT
GCCAGTTTTCTCCAAAAGGAGCTGCTGTTGTGGTCAAAGAGGTACTAGAA
GAAGCTCAAAAGATGGCTGTTGAGCAGTATGGCGTGGAAGACAAAAGTCA
TCTCTTCGTCGACCAATCACACGTTGGACGGGGTCAACATTTAAGACGAA
TCAAATTTCATGGTCGAGGTCGCTTTGGAAGAATGAAGCGTTATTATTGT
CATTATTTCTGCGTTCTAAAAGAAGGAGTTCCACCAGGTAAAGACATCAA
ACGTGATAAAGGAAGACATCTACCAGAACTCGAGCGAAAATTGAGATATC
CAAAAACGATTAAGAACTCACTAGCATGGTGGTAAAAGGTAGTATTTTGa
cctaaatattttgaaatttgtataTATTTATTACAGCCTATTTTTATGTT
TTAGAAAGAATCTTGATAacttaaaaattcttttgatgattaTTGGTTCT
TTAAGAATGACAGTGGGAAATAATAGCAGACTTTCTTTGTTTACTGTGTT
TAGCAAAGTTATTATTCAGTATGTTTTTTTAGTGCATTTGTAAAAGTTTA
CACAATTAAAATAATGGAAgcattcagcaaaaaaaaaacatttaaattta
GATATGAAAAATAGTAGCAAGTTTTAAGCAGGGAATTAtacttaaaattc
attttgcgTGTATAAAACTTGCCAAtagttccaaaaaaaatcaaatttag
aaTAATTACAGTACTCGTTATATTGATAAATCAATTACGATGTCATCTTT
GACGGTTACTTTGATATCGTTTTTCTTTCTACAGCTCTTTTTTCACCTTC
TATGATTGGTGTATTCACTTAACATTTTCCTTCTTTCATGCTTAGTCAGG
GTTGACGTTGGTCATGAACATATTAGATTACAAATTCAATGAAATAAAGA
CGTTGCATCAATGGAAGGTAATTTGTGAAGCTTGGTATCTTCGACCAGGG
AACTTGTTCGGATATTGAATGGGTCGATGAGACATTTCGCCATCATCAAA
TTCATCTGCTGCTGCCGTTGCTGGTGGTGATGTGTCGATTCTGTATTCTG
ATTGATGTTGTTGATGTTGATGTTGATGATGTGGATATCTTGGTGTCATT
CCATCATCTTGGTGGAGGACTGGTGTCAAGTTTCGTTCTTGTTGATGTTG
GTTACTCTCCTCGTCACGAACATTTTGAAGGTTAGTGCTGAACTTCAATT
TCTCTGTATCATCCTGATGACTTGGATAAAAATGACCTTGCGTTTTGGAA
CGCTTTCCTAAGCCATCTCTGACTGGAATTCTGCTTGAATAAGAACGTTG
ACTTTGCATGGTACCGGGTCTGCTTTGCATTGTGCCTGGTCGACTTTTCA
TTGTACCTGGTCTGTTCTGCATTGTCCCTGGTCGCTGTTGTGCTGTTCCC
GCTCTACTTTGCATTGTAGCTGGTCGTTGACTGGTGCCAGGTCTGCTCCA
TTGACCACGTTTCCCTGATGCCGTGCTCGGTGGACGCTTGTTGTCATTTG
GTCTTGCAGGAGGGAGGTTCTCTTTGTTTGGTTGTTGTGGAGGTGCACGG
ATCACTTCACCAAACACTCCACTGCGGTTAGTTGGGATCTCAAAATAATC
ATTCCTTCGACTCATAGCTGGTTGAGTGGCTCCACGTTTGAGACCAGATG
GTTTTCTTGAGCTTGATGCTTGGCTGCTACCAGTGGTGGGCCGCTTTCCT
GCTGGCTTATTTACAAGGTTTGGTTGAGGTACTGACTTGACGATATTGAA
CATTCCAGTGGAGTTACCACGACCAGTTCCTGGATCAGGATAAAACGACC
CATTTGTAATGGTGTCACGTTTTGTTAGTTTTGGCCTTCCACTGCGATCA
GATAATAGGAGGGAGTTTTGTCGACTACCAAGACTTCGACGTGTACTGTC
ACCTCCCAAttccttttcattttctttgttttgttcgtTCGTTAGATGTT
GAAGAAATTTCTTCACTGTCACCAAATctaaa Run BLAST on NCBI transcript from alignment at scaffold_47:381638..391456+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00067453 ID=TCONS_00067453|Name=TCONS_00067453|organism=Clytia hemisphaerica|type=transcript|length=9819bp|location=Sequence derived from alignment at scaffold_47:381638..391456+ (Clytia hemisphaerica)
GTGAGAAAAAGGTTCAAGAACTTTAATAAGTTAAAAATTTTACTATTTCt
ttcaaattcttattttagAATGTCTATCCTAAAGTGAACTCACAACTTTA
TCGTTTTTGCTGCACTTCTTTTACAAACAATTAAATGCTATACCTCAAAG
TACCATTTCAAATTCGGCCATGCTTGAGGCCGGACGNCCCATGCCGGACG
TcgataatatttttattttttaattattgttTGGAGAATTTTTGCTATCA
ACTGACCGAATCAAAGCATTGGATTTTGCGCCCTNCATGGCAGTGCCTTT
ACGGCCAATCACAATTTTAGCTTCTCAAATCTAAAATCAGCCTCTCAGAT
TTGGAATTCGGCTTCTCAGATTATAATTTCAACTTCTNTATGGAATCCGA
AAGATAAATCTCCAATCAAAATTATAAAGATGTCATTATGGAGATCAGTT
TTAACGAATTCTCTCTTTAGGTAAATACTATTATGCTTTAATTATTAAGT
TTTACAGTGTTTTACGATGAAGCTAGAAAATACTTGGGAGCAGAAATCCT
ATTGGTTGCAATCACAGTTAACTTACTGGTAGGTTGTAGGCGGGTCAACT
TACCAAGTCAGCTTGgcaaaatttgtgtgttttcatttcaaaaaatgacc
GACCGACCAGGCAATGTCATCCGAATCCTATCCTATAGtttgatttaaat
tttgattactTATCACAGTTTGATTAAGTTCAATCAGTGTTTTTGTAGCT
AAAATGGTTCCAGTTATTGCTAGCGCAACAGCTCTAGCCTAAACAATCCT
CAACAACTATTGGATTAGCAGAAAACAGTTTTTCATGCGCTCCGAAAATT
ATTTGTGAACGAAAAAACCGTAAATCAAACACAAACacgttttttacctc
ccaaacaattttatacacaacggtggagcgcacatttccccgggccattt
ctgagaaatttgaattacagGAAAGATgtgttactctcgggtacctaata
ggaataagcggggggttggaaaaaatctcaaaacttaataagcagggggg
gggggNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATATAAAATTTCAAcgtta
tatttgaaatatttttcaagttattcaagaaatactatatttttgagttc
actaaatgtcacactatttttgaacatGATCGCGTGCTCGTCTGCTACAA
ACATAACCATGCTGTTCCAAACTTAACCCCAGCTCTACTGGTAGAAACTA
AGCTAAAGTAAATCAAAAAATTAGTGTGTGATTGTTTAAAAAGTACTGCC
AATCGGGGTTACTTTCATAAGCCAGGGGTAACTCTCGTCACAAGTTACTA
ACTgcaaattccaaaaatcaaatataACCCACCACGGTACTGACCGTCAT
GATGTCTGGTACAAACTAAATGACCCCGCCCCTTGCCTGGCATTGTCGGC
TTTTTTAATGCAAAAGGTTACGTAATTTAGAAACAGCACGTCAgattttt
tcttcgattttaaAGTCATTAGACTGCAGTATAACTGTAACATACAGTTT
TTCTGGCATCTATATCAGtaatgtaaataaagcctggggtACATAGTTGT
TTTTTTGCAAAgatatttgataaattttaaatgGTTTGTTGGCTGGTTTA
AAAGAAAACAGTTTTtttagggtagatcgtcaactacaatttttagcatg
atgtggtttcaaatagggtcctgaaatcttttggtgttgaaagtattctg
aaaatactctgggagaatcaaaatggttttggtcaggaatttgcccaagt
ctgccatcatggtattgcatttcccactaaaacgcgatatttaaagttaa
agtctaattttcgcacgctaaaatctcaaaaatggtttcaaatggtgtcc
tgaaatcttttggtgttgaaagtattctgaaaatactctgggagaatcaa
aatggtttgggtcagaactGCACTTATGGTATTgtatttcccactaaaac
gcaatatttagagttaaagtctaattttctcatgctaaaatctcaaaaat
ggtttcaaatggtgtcctgaaaatcttttggtgttgaaagtgtTTTGGAA
Acactcaaggaaaatcacagtggttcacaatggtcatatataagtctgcc
attatgaattttatttctttaagaagaacactcaagcttactcaaaacat
tgtgttttagaatgaaatacaattccataatggcagactttggcaaaaat
cattttggttttcccagagtatttccagaatactttgaCACTATTTGAAA
ccaattttgagattttagcttgagaaaaccaagttttagcttgaaatatt
ggcatttagcatgaaaactcaatttctagggcgccatcatggatttatag
gaaatttttgaaaactctttgaaaaatttttcctggagctatctctgaag
tgtttcattgtagaaaatttcaagtgtgtaacttaaaaagtttaaaagtt
gtgggtcctcaaaaatgctgctttcatgcattttgctacccagaatcgga
gaaaatcagcctttttagcttgaaattgaaacattgaacgATCTCGCTGG
Ggctattttgtctttttgtgttgaatattagtacaagacaccatttagaa
acctttttgaccctttactggtctttcatagtcttaaaatgggcaaaaaa
taccatttttactcattttcgctttagtgcgaatcaaaCCCCCCCCtggg
gaatgctggatttttttacctaggaggttaaaaattgcacAAAATGTCTT
AAAATGTATTAAAtcttcacaaaaaaatactacattttgaattttttgac
tttgctaTTTGCCTATTTTTTCCCTTGTTTCAATACAATCCATTTTTAAG
TCTTTTTGGCAAACTGATTGTATACTACAggaatttgtaaattttaactC
ATCTAGGGCATCTTAGTAAGGTTATCATCCTCTCACACAGgcattaattt
ttggaattggAGATATTGGGAAACATAGAATTCTTTTATATGTGGAATTC
ATCTTGATGAATTATCAAATGGGGTCCAAGCAATTGCAATGCAAGGTTTT
AATAGTTGGAAATAATCAATGTGTTTTTCATGTATTATTCATATGCATAT
gtatttttgtagtttttcaaCATTAAAAGATTATCAAAAGTATATGATTT
CATTGTATATATGATAaatctaaattttatttttttatagcaCACAGTCA
AAGTGTTTATTGCAAGGGATGCGATGTGCAAGTTACTTTTCTGTTGCAAG
AGAACGCATTGGGAAATCAACTACAGAATTGAAGAAAGAGCAGCAAGTCA
TCGCTCCCACTCTTGTTGTATGTTTATTTAGTATTctgtcaaaattatca
aaatatgcTCAATATGATGCCAGTCATTGAAGAgcataaaatttttgctt
ttaagGATTTTGAAAATGTCAGCATGACTGATCATGAGCGTATCTCAGCC
ATCTTcaagattataaaaaagttCCTGAATAGAAATTTCTTCCTTCGAAA
ATTTAATTAGTGAGAATTTCTTTGTGGTGCACTGTTACAAcatagaggta
ataaaagttagatggagtaaaaacttttctgtaatagccagagaagtcat
aaaactctttagaaatttctttcaaatcggcctactttgattaccaatcc
ttggatagcaaaaatcagtcaagatatagattataagaactaaagtaaag
ttattctgTCCAACGAAACCTCGTATTTTTAGGTAAANNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNcatctatatttttattacctccatggttaCAAG
AATGATTACTTTAGAGTCATACAAGGGCTAGAGAAAAGGCCTGATTTGTc
tgtattttattttctgctaTTTGTTCTTGTAACACTAAAAAGAGTTAATT
TAACAATTTTATTCAAAGAGTTCTTGTTCAGAGTTCACTGTCCACGAAAT
ATAtataatgcttaaaaaagctCGATGCCCAAACTTTTAACTTTGCTTAT
AGGAAGTTCCTAATTGTAGAAGAGATGTCAGAATCAACCCCAAAAAGATG
CTTGCAGTCGCTAATCTGGTATGTATGTATTCCACTAATGTGCCAAAGAC
ATATCAATTCTTGCAGAAATCTCTACAGACTTCTTATTCTCAGTAATTAA
GAAAGTAATGCAAATGTCGCAACTAAGAAACGTACAGTCACTAAAAAGAT
GGCTAAAACACTGTGGCCAGCCCCCCAGATAGTGAGAGCAtgagaggtat
aaagaaacaggagaagtatgctattgtaaccatgctcgccctacgattaa
aaatattacgaggtatgcatgctcatgcTCATGCTCGAGGTATTTTGTTG
ATAGgtaaaatcttattggctaacttaagtgttggaaataagatgggacg
agattcattgtttctgacattggtgtaagaaaatatttggattgaaaaag
ggcctgtaaactttgcaatccttcatcaaatgacaagatttttcgatcaa
cattttcttcaaggtgaactctattgcttaatacttNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
Nttgaaattgtgtgtgcttataaagaacttttcattttctggcttgagaa
aatatcttttcaaaacaaaatttaatggatgacaaaattgaacNNAGCTA
CAATATTCTTTGTTTGTACAGACTTGTTACATTACAGGCAGGATTACGtc
acatggggaccagcaaaatggtcagAAATGTTCACACCACtcatttttgt
gatcttatggaTCTAATATGGATCATTttaaaaagttagtttgcttgtaA
CAAGTCTGTGTTTGCACACCATAATAGATGTTTTCAGAACATAGTGGCTC
TCTCTAAGATCTCTAAAACTTCCTAATATTTCATTGTTGTGATGACTTTG
TGATTCCCTGAAAGTCACAATGTGATCAGGGATGCGGAAATTtagatgtt
ttattttattttgactaGGTTTCACGGATGCCAATCGATGAGGCTATAGT
TCAATGCCAGTTTTCTCCAAAAGGAGCTGCTGTTGTGGTCAAAGAGGTTT
GTATAGGATTGATTGCTTTGACAGGTCAAGCTAACTTCTTCACTTTAact
tctttcttttattttttatctatatGGTTTCTTTCAAGTTTCTCTCCCCC
TAATATTAAGCCCCTTATCAATGCAGTTGGATTTAGAATTAATTTTAACC
CAACcacattttaacaattttttgctGCACAATCGTTGTATGCCAAGAAC
CTATATCCCAATGGAAGAACAGCTCTTTGTGGGGCGTtatgattttcatc
aattttaatccGAAGATTTAGAAAtgatttatttacaaaaatgctcaaga
actattgagacagactttacagTGAAGATATTTTTAAGAAAGTCTTTTCT
AAGAGTGCTATTCTTGTAGCTAATAAACTTTCTTTAACTAGTCGTGAATG
AAGAATATCTTTCAAACAGGTACTAGAAGAAGCTCAAAAGATGGCTGTTG
AGCAGTATGGCGTGGAAGACAAAAGTCATCTCTTCGTCGGTAAGACAATG
CTTTGTTTCTTATTTGTAGGTTGTCCAGAAGCGAAACATGGCACTTTTCT
TTTGAATCTCTCAATAAGTAAAGGAGTTggaaaaatagccaaaaataaCA
AGCTGTGGACCAGTTTATTAGGTATCTGAGAGAACATCGGTTAGTGGGTT
GTTTACTGTATGAAATTTTCTTGTAGACAGGAACTTTACGGACCAGGATT
CGAgaaaattttcttgtttttcagtgaaaaataaaaaaccatgTGATGTG
tagtcaaaattaaaaaaaaatatagcacatttttgttttgtgaaCAATAT
TCCGACTTGCGtgtctttttcaactttcttgtttttcaaatattctaGAC
CAATCACACGTTGGACGGGGTCAACATTTAAGACGAATCAAATTTCATGG
TCGAGGTCGCTTTGGAAGAATGAAGCGTTATTATTGTCATTATTTCTGCG
TTCTAAAAGAAGGAGTTCCACCAGGTAAAGACATCAAACGTGATAAAGGA
AGACATCTACCAGAACTCGAGCGAAAATTGAGATATCCAAAAACGATTAA
GAACTCACTAGCATGGTGGTAAAAGGTAGTATTTTGacctaaatattttg
aaatttgtataTATTTATTACAGCCTATTTTTATGTTTTAGAAAGAATCT
TGATAacttaaaaattcttttgatgattaTTGGTTCTTTAAGAATGACAG
TGGGAAATAATAGCAGACTTTCTTTGTTTACTGTGTTTAGCAAAGTTATT
ATTCAGTATGTTTTTTTAGTGCATTTGTAAAAGTTTACACAATTAAAATA
ATGGAAgcattcagcaaaaaaaaaacatttaaatttaGATATGAAAAATA
GTAGCAAGTTTTAAGCAGGGAATTAtacttaaaattcattttgcgTGTAT
AAAACTTGCCAAtagttccaaaaaaaatcaaatttagaaTAATTACAGTA
CTCGTTATATTGATAAATCAATTACGATGTCATCTTTGACGGTTACTTTG
ATATCGTTTTTCTTTCTACAGCTCTTTTTTCACCTTCTATGATTGGTGTA
TTCACTTAACATTTTCCTTCTTTCATGCTTAGTCAGGGTTGACGTTGGTC
ATGAACATATTAGATTACAAATTCAATGAAATAAAGACGTTGCATCAATG
GAAGGTAATTTGTGAAGCTTGGTATCTTCGACCAGGGAACTTGTTCGGAT
ATTGAATGGGTCGATGAGACATTTCGCCATCATCAAATTCATCTGCTGCT
GCCGTTGCTGGTGGTGATGTGTCGATTCTGTATTCTGATTGATGTTGTTG
ATGTTGATGTTGATGATGTGGATATCTTGGTGTCATTCCATCATCTTGGT
GGAGGACTGGTGTCAAGTTTCGTTCTTGTTGATGTTGGTTACTCTCCTCG
TCACGAACATTTTGAAGGTTAGTGCTGAACTTCAATTTCTCTGTATCATC
CTGATGACTTGGATAAAAATGACCTTGCGTTTTGGAACGCTTTCCTAAGC
CATCTCTGACTGGAATTCTGCTTGAATAAGAACGTTGACTTTGCATGGTA
CCGGGTCTGCTTTGCATTGTGCCTGGTCGACTTTTCATTGTACCTGGTCT
GTTCTGCATTGTCCCTGGTCGCTGTTGTGCTGTTCCCGCTCTACTTTGCA
TTGTAGCTGGTCGTTGACTGGTGCCAGGTCTGCTCCATTGACCACGTTTC
CCTGATGCCGTGCTCGGTGGACGCTTGTTGTCATTTGGTCTTGCAGGAGG
GAGGTTCTCTTTGTTTGGTTGTTGTGGAGGTGCACGGATCACTTCACCAA
ACACTCCACTGCGGTTAGTTGGGATCTCAAAATAATCATTCCTTCGACTC
ATAGCTGGTTGAGTGGCTCCACGTTTGAGACCAGATGGTTTTCTTGAGCT
TGATGCTTGGCTGCTACCAGTGGTGGGCCGCTTTCCTGCTGGCTTATTTA
CAAGGTTTGGTTGAGGTACTGACTTGACGATATTGAACATTCCAGTGGAG
TTACCACGACCAGTTCCTGGATCAGGATAAAACGACCCATTTGTAATGGT
GTCACGTTTTGTTAGTTTTGGCCTTCCACTGCGATCAGATAATAGGAGGG
AGTTTTGTCGACTACCAAGACTTCGACGTGTACTGTCACCTCCCAAttcc
ttttcattttctttgttttgttcgtTCGTTAGATGTTGAAGAAATTTCTT
CACTGTCACCAAATctaaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00067453-exon-scaffold_47-1491911889:381638..382107 | TCONS_00067453-exon-scaffold_47-1491911889:381638..382107 | Clytia hemisphaerica | exon |
| TCONS_00067453-exon-scaffold_47-1510915933:381638..382107 | TCONS_00067453-exon-scaffold_47-1510915933:381638..382107 | Clytia hemisphaerica | exon |
| TCONS_00067453-exon-scaffold_47-1575043694:381638..382107 | TCONS_00067453-exon-scaffold_47-1575043694:381638..382107 | Clytia hemisphaerica | exon |
| TCONS_00067453-exon-scaffold_47-1491911889:386578..386704 | TCONS_00067453-exon-scaffold_47-1491911889:386578..386704 | Clytia hemisphaerica | exon |
| TCONS_00067453-exon-scaffold_47-1510915933:386578..386704 | TCONS_00067453-exon-scaffold_47-1510915933:386578..386704 | Clytia hemisphaerica | exon |
| TCONS_00067453-exon-scaffold_47-1575043694:386578..386704 | TCONS_00067453-exon-scaffold_47-1575043694:386578..386704 | Clytia hemisphaerica | exon |
| TCONS_00067453-exon-scaffold_47-1491911889:387540..387605 | TCONS_00067453-exon-scaffold_47-1491911889:387540..387605 | Clytia hemisphaerica | exon |
| TCONS_00067453-exon-scaffold_47-1510915933:387540..387605 | TCONS_00067453-exon-scaffold_47-1510915933:387540..387605 | Clytia hemisphaerica | exon |
| TCONS_00067453-exon-scaffold_47-1575043694:387540..387605 | TCONS_00067453-exon-scaffold_47-1575043694:387540..387605 | Clytia hemisphaerica | exon |
| TCONS_00067453-exon-scaffold_47-1491911889:388656..388733 | TCONS_00067453-exon-scaffold_47-1491911889:388656..388733 | Clytia hemisphaerica | exon |
| TCONS_00067453-exon-scaffold_47-1510915933:388656..388733 | TCONS_00067453-exon-scaffold_47-1510915933:388656..388733 | Clytia hemisphaerica | exon |
| TCONS_00067453-exon-scaffold_47-1575043694:388656..388733 | TCONS_00067453-exon-scaffold_47-1575043694:388656..388733 | Clytia hemisphaerica | exon |
| TCONS_00067453-exon-scaffold_47-1491911889:389157..389226 | TCONS_00067453-exon-scaffold_47-1491911889:389157..389226 | Clytia hemisphaerica | exon |
| TCONS_00067453-exon-scaffold_47-1510915933:389157..389226 | TCONS_00067453-exon-scaffold_47-1510915933:389157..389226 | Clytia hemisphaerica | exon |
| TCONS_00067453-exon-scaffold_47-1575043694:389157..389226 | TCONS_00067453-exon-scaffold_47-1575043694:389157..389226 | Clytia hemisphaerica | exon |
| TCONS_00067453-exon-scaffold_47-1491911889:389586..391456 | TCONS_00067453-exon-scaffold_47-1491911889:389586..391456 | Clytia hemisphaerica | exon |
| TCONS_00067453-exon-scaffold_47-1510915933:389586..391456 | TCONS_00067453-exon-scaffold_47-1510915933:389586..391456 | Clytia hemisphaerica | exon |
| TCONS_00067453-exon-scaffold_47-1575043694:389586..391456 | TCONS_00067453-exon-scaffold_47-1575043694:389586..391456 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_47 | supercontig | scaffold_47:381638..391456 + |
Blast
BLAST of TCONS_00067453 vs. Swiss-Prot (Human)
Match: RM22 (39S ribosomal protein L22, mitochondrial OS=Homo sapiens GN=MRPL22 PE=1 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 4.605e-24 Identity = 68/161 (42.24%), Postives = 100/161 (62.11%), Query Frame = 1
Query: 562 KKEQQVIAPTL-------VEVPNCRRDVRINPKKMLAVANLVSRMPIDEAIVQCQFSPKGXXXXXXXXXXXXQKMAVEQYGVEDKSHLFVDQSHVGRGQHLRRIKFHGRGRFGRMKRYYCHYFCVLKEGVPPGKDIKRDKGRHLPELERKLRYPKTIKNSL 1023
KK + V P L E+ +CRR ++ + KM +A L+ M ID+A+ Q +F+ K A ++KEVL EAQ MAV + VE +S+L++ +S GRGQ L+RI++HGRGRFG M++ YCHYF L EG PP + + H E ++LR +TI ++L
Sbjct: 47 KKNKIVYPPQLPGEPRRPAEIYHCRRQIKYSKDKMWYLAKLIRGMSIDQALAQLEFNDKKGAKIIKEVLLEAQDMAVRDHNVEFRSNLYIAESTSGRGQCLKRIRYHGRGRFGIMEKVYCHYFVKLVEGPPPPPEPPKTAVAHAKEYIQQLR-SRTIVHTL 206
The following BLAST results are available for this feature:
|
