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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00067452 ID=TCONS_00067452|Name=TCONS_00067452|organism=Clytia hemisphaerica|type=transcript|length=1242bp
TCTTCATACTGTTTATTGTCTTGATGTTTTTCTCCATTTCTTTGGGaaat
aaatatgatatttacattcGCTCTACAAGTAATGTAGAAatcaattcata
aaaaaataacatattATCTTACACTATTCACACAATATAATATACTTATA
ATATAACGATTACCAAATGATTGTCGGCAATTCGATAATAACTTTTACGG
TCGTAGATAAAACCATTGAACAACGGTCGTTAGTCATTTTAAAATTACAT
CTTGTCTTCCTTCTTGTAAAaccaaaattgaatttttgtttgttaATTAA
GTTACGTTAAAATAATCTTGCATTTCCTTACAGAGTTCCAAGTGTTTTTG
ACCAGATATGACGTGAATATTGCTGTTAGAAGTGTGGGATAAAGCTCGTC
AAAATCTTCCCTTCTTAGATCTTCAAATATAATATGCTCCTAAGCTTGTG
TAGCCGTTTCTCTGGCATCAATGCAATATTAGGTGAGGAGATGTCTTGAC
ATCGGTAGCATAATATTCAATCGCTTACTCGGATCCTCTTGTAAAGTGTC
TCTCGGAATCTACTATTTATTACACATAGCACCTTTCTCTCTTTACCCAA
ATGTGAACACATTCCATTCAAGGAGGACACACGCCAGCAGTAACTTTACA
TGGTAGTTTAGAGTCTGCGGGTGCCAAGAAGATGGTGCCATCTTTGCAAA
CACAAACTTCCGATACGTCAGCGTACACTTTCCCATCCAGCTTGCCAGGA
ATGGAAGAGAGAGGAATGTTCTTCAACTCGACCTTGCTTGTATCCAACAA
AATCTaaggaaagaaagagaaaatgaTTCCTTGATGCAGAAAAGGCTTGA
TTAACTGAAACGACCAGAGAAAGTTAATGTAAAAACAATGGTCCCTCCGC
TCTCGACCCTCTACCACTGTGTACTTGTTTATTTTTGAGGCTCACTTATG
AGAGAACTTAACGTCATAAATTCGTCTCACCTTTCCGCTCTTAGATGTGA
ACATGATATCAGAGAGGCTGCTCATCTTCAGGTTCCCACCGTACGAATCC
ACCACGATGTCATGCGGTGCGTTCATATGCAATCCTTTAGAAAGTGATTC
CAACTTCAAGTTGCCATTCTCCGGTGCTTGAACGAGCGGTGTTTGTACAG
ATTCGTTGAGCTTTAATCCTCCAGGAACTAAAATGCAGACATTAAGAAAT
TGACCTTGTGAATAGGACCTAGACGTCTATCAAGTGCTTTCC Run BLAST on NCBI transcript from alignment at scaffold_47:351883..353195+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00067452 ID=TCONS_00067452|Name=TCONS_00067452|organism=Clytia hemisphaerica|type=transcript|length=1313bp|location=Sequence derived from alignment at scaffold_47:351883..353195+ (Clytia hemisphaerica)
TCTTCATACTGTTTATTGTCTTGATGTTTTTCTCCATTTCTTTGGGaaat
aaatatgatatttacattcGCTCTACAAGTAATGTAGAAatcaattcata
aaaaaataacatattATCTTACACTATTCACACAATATAATATACTTATA
ATATAACGATTACCAAATGATTGTCGGCAATTCGATAATAACTTTTACGG
TCGTAGATAAAACCATTGAACAACGGTCGTTAGTCATTTTAAAATTACAT
CTTGTCTTCCTTCTTGTAAAaccaaaattgaatttttgtttgttaATTAA
GTTACGTTAAAATAATCTTGCATTTCCTTACAGAGTTCCAAGTGTTTTTG
ACCAGATATGACGTGAATATTGCTGTTAGAAGTGTGGGATAAAGCTCGTC
AAAATCTTCCCTTCTTAGATCTTCAAATATAATATGCTCCTAAGCTTGTG
TAGCCGTTTCTCTGGCATCAATGCAATATTAGGTGAGGAAATNTCAAATA
TAATATGCTCCTAAGCTTGTGTAGCCGTTTCTCTGGCATCCATGCAATAT
TAGGTGAGGAGATGTCTTGACATCGGTAGCATAATATTCAATCGCTTACT
CGGATCCTCTTGTAAAGTGTCTCTCGGAATCTACTATTTATTACACATAG
CACCTTTCTCTCTTTACCCAAATGTGAACACATTCCATTCAAGGAGGACA
CACGCCAGCAGTAACTTTACATGGTAGTTTAGAGTCTGCGGGTGCCAAGA
AGATGGTGCCATCTTTGCAAACACAAACTTCCGATACGTCAGCGTACACT
TTCCCATCCAGCTTGCCAGGAATGGAAGAGAGAGGAATGTTCTTCAACTC
GACCTTGCTTGTATCCAACAAAATCTaaggaaagaaagagaaaatgaTTC
CTTGATGCAGAAAAGGCTTGATTAACTGAAACGACCAGAGAAAGTTAATG
TAAAAACAATGGTCCCTCCGCTCTCGACCCTCTACCACTGTGTACTTGTT
TATTTTTGAGGCTCACTTATGAGAGAACTTAACGTCATAAATTCGTCTCA
CCTTTCCGCTCTTAGATGTGAACATGATATCAGAGAGGCTGCTCATCTTC
AGGTTCCCACCGTACGAATCCACCACGATGTCATGCGGTGCGTTCATATG
CAATCCTTTAGAAAGTGATTCCAACTTCAAGTTGCCATTCTCCGGTGCTT
GAACGAGCGGTGTTTGTACAGATTCGTTGAGCTTTAATCCTCCAGGAACT
AAAATGCAGACATTAAGAAATTGACCTTGTGAATAGGACCTAGACGTCTA
TCAAGTGCTTTCC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00067452-exon-scaffold_47-1491911889:351883..352364 | TCONS_00067452-exon-scaffold_47-1491911889:351883..352364 | Clytia hemisphaerica | exon |
| TCONS_00067452-exon-scaffold_47-1510915933:351883..352364 | TCONS_00067452-exon-scaffold_47-1510915933:351883..352364 | Clytia hemisphaerica | exon |
| TCONS_00067452-exon-scaffold_47-1575043694:351883..352364 | TCONS_00067452-exon-scaffold_47-1575043694:351883..352364 | Clytia hemisphaerica | exon |
| TCONS_00067452-exon-scaffold_47-1491911889:352436..353195 | TCONS_00067452-exon-scaffold_47-1491911889:352436..353195 | Clytia hemisphaerica | exon |
| TCONS_00067452-exon-scaffold_47-1510915933:352436..353195 | TCONS_00067452-exon-scaffold_47-1510915933:352436..353195 | Clytia hemisphaerica | exon |
| TCONS_00067452-exon-scaffold_47-1575043694:352436..353195 | TCONS_00067452-exon-scaffold_47-1575043694:352436..353195 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_47 | supercontig | scaffold_47:351883..353195 + |
Blast
The following BLAST results are available for this feature:
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