TCONS_00067424 (transcript) - C. hemisphaerica

Overview
NameTCONS_00067424
Unique NameTCONS_00067424
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length370

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00067424 ID=TCONS_00067424|Name=TCONS_00067424|organism=Clytia hemisphaerica|type=transcript|length=370bp
TTATTTCGGCTGAAATTGCACTTTAAAGGGGGTACTTTAGAGAGAGGAGC
ATTTTGGGTTGGATATCAGTCCAGTGTCATTGTCTCTTCTTGTGCTACAA
gcctttccaagcaaaaaaaagtgaatatcataaaaataattgttgccatt
gtttttgaaaacctgtgaaaagcttctgattggtcaagccctgaaattct
attgtattgtcacgtgacctaggtaagATTTCCTACTgcaccacggcaca
cttttcagccaaagcactcTATCTAGCCTTTCGGGTTTTACATTACAAAG
CTGTGAGTTGTAACCTTACTAACAGTACAGATTTAAAGCTCTAAAAGCGC
TCTAGTAGCATGAAAACCAA
Run BLAST on NCBI

transcript from alignment at scaffold_469:493853..494222

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00067424 ID=TCONS_00067424|Name=TCONS_00067424|organism=Clytia hemisphaerica|type=transcript|length=370bp|location=Sequence derived from alignment at scaffold_469:493853..494222 (Clytia hemisphaerica)
TTGGTTTTCATGCTACTAGAGCGCTTTTAGAGCTTTAAATCTGTACTGTT
AGTAAGGTTACAACTCACAGCTTTGTAATGTAAAACCCGAAAGGCTAGAT
AgagtgctttggctgaaaagtgtgccgtggtgcAGTAGGAAATcttacct
aggtcacgtgacaatacaatagaatttcagggcttgaccaatcagaagct
tttcacaggttttcaaaaacaatggcaacaattatttttatgatattcac
ttttttttgcttggaaaggcTTGTAGCACAAGAAGAGACAATGACACTGG
ACTGATATCCAACCCAAAATGCTCCTCTCTCTAAAGTACCCCCTTTAAAG
TGCAATTTCAGCCGAAATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_042117XLOC_042117Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00067424-exon-scaffold_469-1491911889:493853..494222TCONS_00067424-exon-scaffold_469-1491911889:493853..494222Clytia hemisphaericaexon
TCONS_00067424-exon-scaffold_469-1510915933:493853..494222TCONS_00067424-exon-scaffold_469-1510915933:493853..494222Clytia hemisphaericaexon
TCONS_00067424-exon-scaffold_469-1575043694:493853..494222TCONS_00067424-exon-scaffold_469-1575043694:493853..494222Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_469supercontigscaffold_469:493853..494222 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0.249501	0.488196	0.297166	0.234825	0	0	0	0	0	0.733788	0.586214	0.152197	0	0	0	0.169553	0	0	0.213055	0	0	0	0	0.422301	0.302155	0	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00067424 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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