TCONS_00067404 (transcript) - C. hemisphaerica

Overview
NameTCONS_00067404
Unique NameTCONS_00067404
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1605

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00067404 ID=TCONS_00067404|Name=TCONS_00067404|organism=Clytia hemisphaerica|type=transcript|length=1605bp
AAATGtcattaaaaatggtagaccgAGCTGCGGAACAAAATTTCGATGAT
ATTTCTGGATATTTCGATGCCAAATTTTTGAAGCAGAACCATAGGTACCA
AATACAAACACAAAGACGAATCTGCAAGCTAGGGCTctcaagaaacattt
taagTTGATGAGAAGTCAATGATGGTGTTTGATCGCTTTGAAGAGTGGGA
ACGTCAAAATGAAtccaaaacacaaaataataAAGGCAAAAATGCGAAAA
GTTATGGTATAGAAGAACAATACGGaatcaagaagaagaaaagggaaCCT
GCAATCCCTACCACCACAACGTTAGataaatttaatcaaaaaatcaagaa
attgaaTAAACACAAAAAAGTTGAGAATTGGCTTAAAAGTAATGACGCAA
TTATTTCCGTACCCAAAGATACTCGAGAAAAGCCCAAAGAACGGAAAAGG
TCTTCTTCTTCTGTAGAATCGAGCACTAAACCTGCCCCACCCAAATGCAA
TAAACATATACCAATGAACACCTCCTCCTCCAAGAAGCGAGAATCCTCTG
AtgctaaaaagaagaaaaaggacACTATTTTAATCGAAAGCACGGACGAG
GATAATATTTCGGACACTTTTCAAACTTACGAAAGAAAGGAAGTCAAAGT
GAGTAGGTTTAAAGAAGAGGATGTATTCGATAATTTTGTTACCAAATCAA
AAGTTGCACCACCGATCAAAAGAACAATATCCAATCCGACTACACTGAGG
GAGAAACAAGCCAAAATCCCTAAAAAGACTCAACAGAATAGCTCAATGAA
TTTGAGTGTGAAAAAAGAGATCAAGTCAGAGCTGAGTGAAGTGATTGTTA
AAACGGAGAATCACAATAGCGATGAGATGGACCTTTATGATAACGAGACT
CAGGACTCACGACAACCCATCGAGGTGGAAGAGACTATTACTGTCAAAAA
AGAAGTACGCAGTCCACAGAAGAGAGTCATGCCTGCTTCATTTATCTTGA
AACCTACAACTCAAGCTTCCACTCAGACGGATATTGCTGCTAATAATTTG
AAAGAACTTATGAAATGTGAGGGAGTTCCGGATAAACTGAAAAGTGANTG
AAACCTACAACTCAAGCTTTCACTCAGACGGATATTGCTGCTAATAATTT
GAAAGAACTTATGAAATGTGAGGGAGTTCCGGATAAACTGAAAAGTGAAG
CAGTCTTTAAATTCACCGTTAAATTAAAGAATGATCAAATTTGTCAAAGA
GTTGAGAGGAAGGTGTTTGATTCCAAAAAGAACAATTTGGCTTCATGGTT
TGATTATATTTTAGACAATTACATTTCAAAACACGAATACGAGGGTGAGG
ACGGTTATAACAGTTTCATCACCATGGATTCCATGTTCCGTGTGTTCTCG
TGTGATGACGAGAAGAAAGTGCCAGGGATGTTGGAAGTGCTAACGGATGG
CTCCAATGAGGATAATTGGATGCGAGGGATCAGGGAGCCGATCAGAATAC
ACACAGTGATTGATCGACAACTTTATGGAAACATCTTGGGAAATGATGCT
CAAAGGTTACCTGATTTGATCATTACCAGACTCTTTCCGATTGACTCTAT
AGGTT
Run BLAST on NCBI

protein sequence of TCONS_00067404-protein

>TCONS_00067404-protein ID=TCONS_00067404-protein|Name=TCONS_00067404-protein|organism=Clytia hemisphaerica|type=polypeptide|length=310bp
MMVFDRFEEWERQNESKTQNNKGKNAKSYGIEEQYGIKKKKREPAIPTTT
TLDKFNQKIKKLNKHKKVENWLKSNDAIISVPKDTREKPKERKRSSSSVE
SSTKPAPPKCNKHIPMNTSSSKKRESSDAKKKKKDTILIESTDEDNISDT
FQTYERKEVKVSRFKEEDVFDNFVTKSKVAPPIKRTISNPTTLREKQAKI
PKKTQQNSSMNLSVKKEIKSELSEVIVKTENHNSDEMDLYDNETQDSRQP
IEVEETITVKKEVRSPQKRVMPASFILKPTTQASTQTDIAANNLKELMKC
EGVPDKLKSX
Run BLAST on NCBI

transcript from alignment at scaffold_469:445200..467982-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00067404 ID=TCONS_00067404|Name=TCONS_00067404|organism=Clytia hemisphaerica|type=transcript|length=22783bp|location=Sequence derived from alignment at scaffold_469:445200..467982- (Clytia hemisphaerica)
AAATGTCATTAAAAATGGTAGACCGAGCTGCGGAACAAAATTTCGATGAT
ATTTCTGGATATTTCGATGCCAAATTTTTGAAGCAGAACCATAGGTACCA
AATACAAACACAAAGACGAATCTGCAAGCTAGGGCTCTCAAGAAACATTT
TAAGGTACATGTAAAACAAACCATACAAGATACAAGATGGCGGATATAGC
TACGATTGTTGATCAAATAAAGCAAAACAAAGATCAACCGTCAGTTCCAT
TTATCTCCAACATCAAAGACATTTGCAGAAGTCCAAGAGATGACTTCACA
GAGCAACTCAAATCGACAGACATTAACTTTTTATCCTTGCTTCGCAAACA
ACTGTTTTACATCTTTTTGGACAATTTTGACTCAGCTACCCTTGAAGCGA
ACGGTTTTCCCACGTTATCAACATCAGAGGAAGATGCCAAGAAACATCTA
AAATGGCTGAAAAAACGCTTTAACCCAGAATATGCATCGAATGACATTTA
TGATATGGGTCTCAGCATTATGGAGGATAGAATTCTTGATAAGCTTGCTT
TGGTCTTACTCACCAAACCTCTCACCATCACAACAAGCTCAGATACTTCA
CAATCACCAGATCTGCCGCCCTTACAGTCACTGAACGTAATCGACAACAA
TGGGAAGCTCATCCTTCAAAAACTAACTGATCTAGTAAGCATTACAACAA
AAATTCAGGAGGAAAATAAAGAACTCAAACAGCATATCAAAATCTTAGAG
AGAAAAATTGACCAGCTTGACCATATACCACAGTCGAAACCCAGCATAAA
ATCAACAAACAGTAACAACTCTTTAACCAAGGGAAGGGCAACCTCGACAA
TGTCATCACAACATCAGCAAGNCCTATAAATTATCCATTGAAATCTTGTT
TGTTCGTCTGTTATGAACTTTTCTCAAGATGGGTTCATTAGTTAATTCTG
AATTTTGGAACAAAAGGGCAAGATGAAAAACATGTGACAGCCTGATTTTC
GAAAAAAATAAAATCTCATTTGACATATTTTGCTCAAAAATAACCTAAAA
ATCCTGGGTGGTCCAAAAAAACTTTGATGGCTTGATAGCTTCCTGGAGCT
GACAAAAATGTTTTATGATTAATGTTTTTATTTCATTAGAAGGTGGAAAG
TCTAACTTTAATTTTGAGGAATAACTTCAATTTCGGTTCAGTAGTCACCA
AGTTATTAGCTTTTTAACCAGCAGACGATGTCAATCGAACGCCAAATCAA
TTGAACGCAATCGAATTATTGAAAATAATCAAATATTACTGCGATTTTCT
CAATTGATTCAATTGCGTTTGATTAGTGCTAGATTCGATTGATTCAAACT
CGTCAGATCATCGTTTGATTGGTTCATTTAATCGATTGATTCGACTGGTT
TGACTATGTTCGGTTGGCTGTTTGACCATTCACTTCTCGTCGTTGTACTA
ATCAAAAAAACATATCACCAAAACTATAAACCATAAAGTTTACTTTATCT
CATTCCATACCCTAATATTTTATTATTCCATTACCATCGGTTATCGTCAG
TTAGCCAGTGGTGGATACAGAAGGTTCTCAAAATTTTTGACAGAGAGTGT
TACCTTATTTGGAAGTCAATGCTCGTACGTAATATATCGGGTGGTCCAAA
AAAAGTTTCTATAAAAATTGAACTTTGACGTAGCCTGCGCTATTTGTGCT
ATCGACTTCAAATTTTGCATAGCAAATCTTAAACATATTTAAAAAAATTT
CAAGATACAAGATGGCGGATATAGCTACGATTGTTGATCAAATAAAACAA
AACAAAGATCAACCGTCAGTTCCATTTATCTCCAACATCAAAGACATTTG
CAGAAGTCCAAGAGATGACTTCACAGAGCAACTCAAATCGACAGACATTA
ACTTTTTATCCTTGCTTCGCAAACAACTGTTTTACATCTTTTTGGACAAT
TTTGACTCAGCTACCCTTGAAGCGAACGGTTTTCCCACGTTATCAACATC
AGAGGAAGATGCCAAGAAACATTTAAAATGGCTGAAAAAACGCTTTAACC
CAGAATATGCATCGAATGACATTTATGATATGGGTCTCAGCATTATGGAG
GATAGAATTCTTGATAAGCTTGCTTTGGTCTTACTCACCAAACCTCTCAC
CATCACAACAAGCTCAGATACTTCACAATCACCAGATCTGCCGCCCTTAC
AGTCACTGAACGTAATCGACAACAATGGGAAGTTCATCCTTCAAAAACTA
ACTGATCTAGTAAGCATTACAACGAAAATTCAGGAGGAAAATAAAGAACT
CAAACAGCATATCAAAATCTTAGAGAGAAAAATTGACCAGCTTGACCATA
TACCACAGTCGAATCCCAGCATAAAATCAACAAACCGTATCAACTCTTTA
ACCAAGGGAAGGGCAACCTCGACAATGTCATCACAACATCAGCAAGAAAC
ACCATTGCCACAGCCCACAACAACTCAACAAAGCAACACAAGTAATCGAC
CAATCTACGGGAACAAAACGACTAAAACCCCAATTGCCGGCCAACCTCAA
CCATATTCTCTATTTGTTGGTGGATTCGATCTAAAATTCAACAGCAATCA
GGTCCGAGAAATTATCCATGATGAACTTAACTTTGACGTATTGAACATTT
CTCCCATCAAACAGAATGGTTATAATCAATCTTTTCGAATTGACATCCAT
GTCAACGACAAAGCTAGGGCTCTTGACCCAAGATCATNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNGCCTTTTTATAATGAGCGAGACATACGTTCTC
TGATTGCGCAATTTTCATATTGACATTTTCGAGGCATTTTGATGTAACTG
TGCGAAGCGATCCAGACTCCACCTCAATTTGCAAGTTGCTAGCAAAATAA
AGAGACACTCTAAAAATCCCTCTAACTAGCCGTATTGTATAAGGGTTGCG
AAGCGATCCAGACTCCACCTCAATTCGCAAGTTGCTAGCAAAATTAGAGA
CACTCTAAAATAAAAAGCCGCTATACTACTAGAGAGAGCCAGGGTCGTAA
GAGCCTTAATGCCCCAAACACACCACATAATCCACGGCGGAACAACACCC
GCCGTCTCCCGCCACGCATCACATCGCTCTTTTTTTGTTCTTCTAGTTAT
TCTAGTGTAAATGGTGCCTTAATGAAATCGAAAAATATTAGTCGAACGAT
CGAACATTTTTATTTGAATCACGAATCGCCTGTCGAAATCATCAAAACAA
AACATAAAAATAAAACAAAAACAAAAATGTACAAAGATGGCTTGTTGGTT
CTTGGGCAGTTTTAATTTATTTCTTGACAAATTCGACAAATTTGATTACC
TCCATACTTCTTTATCATAGATTATCCACTTGGTTTTGCAAGGTAAGCTT
CGTTCACTAAAAGAGCACTCCTCCCGCCCGCCCGCGGGACTTGCAAAAAC
CTCTCATTACAGGTGTTTGCCCCTCAGAATGTACGTGAAATTTACTTTTG
CTCTAATTTTTTTTTTCTGTACTTTTTTAAACTTTTTTTGGTGTTTTTAC
AAGGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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TTTTTTTCTCAAATTGAACTTTTATACTTTATTTAGGGGGGACCGCAGAA
TGTCAGTCTGGAAAATCGCATTATCTGGAGAACAAAAAGTCATCCATTGA
TGAGATTTTGTGTGAATGCATTTATTTGAATCCTTTTTAATATGTAAAAT
TTATGTTGACTTATTTTCAAGGGAATCCCAAAGTGCCAGTGATAGGGACC
TCAAAATGCCACCTTTTGCAGATGATTTTTCAAAAAATCCAAACTATGTA
GACCAGTTTGATTTAAAAGCTTCCCTTTCCTATTGCTTTGAACTACCTAG
AAAAGCCATATTGTAAATGATTAGTTAGACTGTGTGTAAATTTGGACTAG
TTTGATTTAATAGTAAAAATTAGGTTTTATCAAAAAGTAATAAAGTAAGA
CATTAAGTTGGACAAAAAGGTAAGGGTAAGAAAGGTATTGGCAAGCTAAT
ATTATGGCTAAAGTTAAGTTATCAAGACATGAAGACTTCTTTTCTGACAT
TGATGATGATGATGATAGTGAGAGCTACTCAACTACTGATGATAAGGCTG
ATGCTAGGTCTACTGCTGATGACGAGCTGGAGGAAGAAGACGAAATTGCC
ACAATGAAATCAACTTGGAAAAGACTAAGCCCTCCAAATACAGAGGCTAG
TCTCATTGGAAAGTGGTTTGGTGTCTNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNTGGATCTGGCACTGTTTTGGAATACACACCTTCCCATCTA
CCACCTGACGAGTCAACCTTTGAATTGACTGATGTAATATGTGGGCCTCT
AGAAGTCAATCCTTTTAGGAGCATCTAAATTTAATGTTCCTGCATATGAA
AAAGTAACATTTTGAAACACAAAGACAGGACAAATGTAAACTTCCAATCA
TGCAATATTTGATGAAATCTAAAATTGTTCCTTTTTAATATATTTTCCAT
TAAAAATGGTTTCTAAAATTTTCTAAATAATTTTATTGTAAATTGTGTTT
CATAGTAGTTTATTTATAGTTTATTTTAAATTTGCATTGAAATCCTTGTT
CCTAAAAATATTCGATATATGTTAAAGAATAAAATGAAACTCCGTTTCCA
ATTAAGGGGGACCCGCAAAATGCCAGTCAGTTACATCAAAATGCCTCGAA
AATGTCAATATGAAAATTGCGTAATCAGAGAACGTATGTCTCGCTCATTA
TAAAAAGGCCGAGACAAACTTTCAATANNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNAAAGGCCGAGACAAACTTTCAATAATTGGATTGTAACA
TCGAGTTAAGTCTCTTTTGTTAAGTCACCAGGGGGTAAATAAAACAGACC
TTGATACATTTAGCGTTCGTTTCAACTTGACCATTCGTTTAAAACTTAGC
CTCCCAAATATTTGGGATAGGTAAAATATGTACAAAGAAATTCATATTTT
TCCAACCCGGCAAATCTTTAAAAATGAAGCGAACAATAAAATATAATTAC
CCTTTCCAAATAAACCTCTTCGGTGGCGAGCGTATCTACTCTGACGTAAT
TGTAAAGTTTATGTGATNTGACCTTATTTGATACTTAATACTTGCTGTTA
AAAGTCAAGGGATGATTAAGATCCTTTCTGTCAATGTTATAACTAATTTT
TTCCCATTTAACAGCAAAATAAACATTTAAAACCAAAGAACCACTGCTTA
TATGTCTGCCGCCCGCGCGAGGCAATTTGATCAACTTCAGATTCTAAGTC
TGTGTTTCGGCTTCCGGTAATTTTTTGCTGTTCACTGCTAGGGTACACCA
TTTTAAAACGGCATTTTTCGCAGTCCTAGCTACCAAACCGAGAAAGTTTT
CNNNNNNNNNNNNNNNNNGTTCTCACACTTATGTCTTTTTTTTTTCGCGT
CCTTTTCCGTGATCACTTTTATTTGTATTTTTGAAGACAGGTAAAAAGGC
ATATTGATGTAACTGCCAGTCTTGTGATGTAAGAGTTTCTGCCATCATAG
ATTTGTCTATGGTATTGGGAACAGCTAATTTCTACTTAAAATGTTTCTAC
TATGTTGGGGCTTATTGAAAATTGCTACTTTGCACACTTATATTCAGATC
ACAGGATTCAAGGCCAAAAACCAAAAANATTCGCTTCGCAATAAAGCCGC
TATAGAGACAGGGTCGTAAGAGCCTTAATGCCCCAAACACACCACATAAT
AGACCTTTTCGCCTTTGCGTCCGCCATATTGAATTGTATGCAAAAATACA
GGAACGAAAATGGCGTGGTTGGATTTAGTTGGAATGTATGCAAAACATAT
GCAAGTTTACACAAAGATTAAAAAGACAACAAAGCATCTTATAAATAAAT
ATTATAATCATTAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAACAATAAAAGAT
GGAATTTCTTAATCCAAAAGGAAATATTTACAGAACAACAAAAGCCTTTT
AGGAATTTGTTCTTAAAGACATTGCATATTCTGTTTTCGTGCCATTAAGA
AATTCCACGAAGACGGAGTACACACATCAAACTTTCAAAACGCAAACTGA
AAGCAGTAATTGGGCTATCCCAAAAAAAAATTGTACAGAGGTATTGACGA
ACTTTTTTCACTAACCCCCCTGGAAATTTTGGATAACAAACCATCCCCTG
GAAATTAGGCGTCGACACCCCTGGAAAGTGAAATTTTGTGAAAAAGGGCC
AGGAAAATAACTATTGCTTTCAGTTTATAGGAGGAGAGAACCCCCTGGAA
ACCTTCAATATCCCCCTTGAAAAATCTGAAAAATGAATTAAAACCCCTTG
GAAAATCAAGGCTCAGACCCCCTGGAAAAGTTCGTCAATACCCCTGTATG
GTTTAAAAATGAAATAGCCCATTATGACGTCACACTTTATCAATGTTTTG
ATTTGATCATTTGGCGGCTCTATTCCCAGGAGAATAATTTGCCGTCAGCC
GAATAAGGATTGTTTTTTACCTTCGCGNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTCC
ATTTAACAGCAAAATAAATATTTAAAACCGAAGAACCACTGCTAAGATTG
CTTAGATGCGTGCCGTCCGCACGTCAATTTCAACTTGATCAATTTCAGAT
TCTAAGTCCGTGTTTCGGCTTCCGGTTATTTTGTTGCTGTTCACTGTTAG
GGTACACCATTTTAAAACGGTATTTTTCGCAGTCCTAGCTACCATACCGA
GAAAGTTTTCATGGCTTCAAGCCAAACCATTCAAGGTCATTTTGATAAAA
TCATCGGTTTGAAGATGTGATTTATATAGCAAATTTTATAGCAAATTTTC
GCTTGGGATAGAAGTTAAAGGTACGTGCACAATATAGCAAAACTGCTTCG
CTCATAAATTCGCTTCGCAAAAAACCGAAGGAGATAGAAGAGTCTCTAGA
TGCGTGCTCGTGCCGCGTTTATAACTTCATATATTTTAGCTCCATGTTTC
CGCTTCCGGCAACTATTTTTCCGTTCACTCCTAAAGTACCATTTTAAAAG
TTTCATACCGTAACGCGTAACCAGGTGCCAACTCTCACGCCATTGGACGT
GAGACTCACGCATCATTCCAACACTGTCTCACGCAATTTTTCAAAAGTTT
GATTTCTCACGCATTTTTGACTTTTCCTCTTTTTTCAAATTTTTTGAAAA
AAGTTTCCCAGATTTTCTGATTTTCAGAAAAAAATGTTCCCCTTTTTACC
GATTTTCGGAAAAAAATTCCTAGATTTCCTATTTTTGGAAAAAAATTTCC
CAGAATTCCGATCTTTTAGGAAAATATTTTCCGGTTTCTGAAATCAGAAA
ATCGGACTAAGATTTTGGATTTTGCTTCGAAATTTTTATCTCACGCAAAA
TGAACATCTCAAGTTGGCAGGTCTGGCGTAAGTTGGTCTTAACAGTCTAA
ATTTAAACTCCTATATCATTATTAGAAACTAGGCTAGTCCTACCTCTTTT
ACCTTTCCCTTTACAACAATTACAATGCTGACAAGTTGAGACAACACATT
GACAAGTAATCCCTGACTAAGAGAAGTTTACCGTAACGTTTACCGAGAAG
TTTACTGTAACGTCGACATCCCTCCTCTAATTCCGACACCCTTTTTATCA
CCTGAAATTGATAGAGAGGTTGAAACTTTTTTTCTTTGCTTAGTGGTCAG
AGAAGAATAATCCTTTTTCAATCAGTGATTCAAGCTTTCATATTATTCCT
GTTTCGAAAGCAAGGGTGTTGGAATTAGACGAGGGATGTCGATATTAGAC
CAACTTACGGTATATCAAAATCTGCAACAAAAACGAAAGTGGTCTCTTCT
ACTGATTGATTCTTGGCGCTCCTTCGCAGCTGTTTATAAAATTTCCACCA
ATGAGGTTGCTGCAATTCAAATGGGCCTTCTTTTTGGCACCTGTGGCCTC
TCACAGTGCCTTGCACAACGGGCGGCTGTAAAAATCCACCCTTCATATAT
TTGTTTTAATCCGTAATTCTAAGGCTTAGGTTTTTTCTCATCTTCAATTT
ACTGAAGAAAGCGGGAATTTGATGCGAGAGTTACATTGTCAACAAAGTGC
CGTAAAAAATCATTGAATAAAAGAAGAACTTAAAATCTTAAATATTTTCA
TTTTGAAGAATTGGTGCAAAAAAGTGAAACATGGAAAAGTTTCATTTTTT
ATTGGTTTAATTGAAATAGGGGATTTGGAAAACTTCCTATGTTTGTTTTG
CACAATTCTATGACTATGGGCAAGCACCGGGTTGCTAAGATGTTGGCTTG
AAATCGAAAGTGAAACCACTGAAAACGAAAGTAAAATCGGCCCGTACTCG
AAATCCCGTAATCTTGATATACGAGTTTAAGTCTATACTGTCCAGGCCCC
ATTTTAGATTTTTGCCTTCGAAAACCATGCCCAAACATGTGCGGGCCACT
TTAGGTCATATTCGGGACTTTTAGTTTTTTAAGTTCAAAATCCCCAAAGG
CCTGGAAAAGTTCACTTTATAGCTTTGATTCCCATTCAAGAATCATATTC
TGGTTTTCATGTTATTAGATGCTGTTTTAGAGCTTAGAGCTAGCCTGCCA
AAAGCCTGGAAAAGTTCGGGCCATATCGTGGGTCATATATAGACCTTTCA
ATTTGGTAAATTTCATGTGTTTCCATTATTTCAAGAAATGACTTGTGAGT
CATCAATGACGAAAACAATCATTAAATTGATTGAGATTCAATTGTGCTCA
ATTGTGCTTTTCCCGATCTGAACTTCTTGTTAAATAAGGCTGCGTTTCCA
GGGAGACTTGAGTTGGGAACACATTAGTCTATTTTCATTATTTTCATAGT
TGTTTTTGGTCAGAGACAAGTCTGGCTTGTAACATCAAAGATGAAGTGAT
CTGAGAGAGTAGTTGATGTATTATGTAGTTGAAGATTGAATCAGAATTAT
TTGCCAGCCAGCAGATTATCTGATTCAAACTAAAAATTGATGTAAACTTG
TTTTAAAGAAACAATGAGAAGCTGAAACAGAGAAAACATTCGTACCGTAG
GGTTTTCTTTTCAGAATAAACAATAAGAAGACTAAGATCAGAAGCATCCG
ACAAAGCAATATCTCCGGCTAGTTCGAAACACGGGTCACGGGGCACAGGT
TACGGGGCACGGGGCATACAAATTACAGACCGGAAAAAATATAACGATAT
CATGACGTAAAATTCACAACACGTACTACATAACACATATAATAGTACTA
GTACTATTAGTATAGTATGTCTGGAGCAATTATATACGAATAAGTATTAT
CATGAAAATTTTTAAATAATATGTCACCCACAAATTTTGACAAAATGATA
TTGAATGTCAAAAATATTGTCAAAATCATGAAATATAAGGCCTCTGAACC
AATTTACAACAAAATGTTTTTTCATACTCAATAGGATGCTAATCATGTGA
CTGGATATAGATTGACATGTTTTAAAACGATTAAATGCTGCAAGAAAGTG
GCTTTAGAGATATGAGTATAATTACGTCATTTTTATTAAAAATTCATAAT
GGTAGGTGGAAAATATTGACACATTTATAAAATACCATCATTTCTAAGTT
ATTATCCATTAAAATTATATTCATACTCAAGGTGATGAAGGGGATATAAT
GAGATATGATTTAACAATAGCCGTACTATTATTTTCTTGAGAAAGCTGTT
TTCAGGTGATGGGAATTGTAATATGTATATTACTTACGTATAACATATAA
CATGCATATAGCATTAAAAGTGTATTATTGATAATATAAGCTTATTATAT
GTATGTAATATGTTACGGTGTTTTCTGGTCTGCGTTGTTCACTACGCAAA
CTGCGAAAGCACGTGGAAAGCACTTGGTTAGATTTTGACGTTTTAAATAG
TCATACGTTGATAAAACACCTTCAAATTGATTTTTTTGATCATTTTTAGC
CTTTTTAAAACATTATCTGTTTGAATTACTTTGATCAGAGCTGCCCTGTA
ACCCCGTGCCCCGTGACCCGTGTTTCGAACTAGCCGCAATATCTCAAAAA
TGTGTTTTTTTATTTTCTAGGAAACGACTTTTCATAAACCTAATGGCTCT
CTCTTGATGTTCGTAGTAGGTAGTTATTGTGATTAAAAAAGGCATAAAAT
TTCATACTGAAGCTCAGATAAAATTCATGCCTGATTCAGAAAAGGCCTGA
CTCCATCAATTAATTATGATAAAAGGGCAAATCCACTATAATGCGTTTGT
TAAGTTTTAAAAAGGCCTTACTCCTATTAAATTAATTAAAAAAGACCTAA
GTCCATGCATCTTTAATAGGGGCCGTCTACATAGTACGTACACACTAAAA
TGTCGTACATACTATGTNGAGAATGGGTGGTTGTAAAATTATCAATTATC
AGCCAATTTAAGGGCCCTCCTTTACACAAAAATTGAAAATTCAACCTTTC
TCATTTTGTCGACAGATTTCCTTGAAATCTTTGAAAACTAGCAAAGATCA
ACTAAAAACCCTAGAAACCCTTGAAAGTTTGTGGTATATAAAAATNGTTT
AATTACGTCTCTCTTTATTTGATCAAGATTCTCTTTTCTCTCTATTCTGA
ATGTAGGTGTAAGAGACAAAAATGGACCCTTTCACATTTTCAAAAATTCA
TGTNGTATAGTAAAAAATGACGCCCTTGAATTTGTTGAAAAAGAAGTGCT
GGCCGCCATGGAAGTATTTTCCCAGGAATGACAAAAGAGCAAAAAATCCT
TTTTTGTATTTTNACCTGTCAGGTAAACAGATATCTTCTTTTCAACAGTT
TACCTTTTTATTGCATGATCAAGTTAAAAGCTATGGCTTTCAGAAAACAT
TTACTTTAAAGCTTGAAAATCAAAAATAGTTTCAGAATCAAGAAAAAAGT
TCAATTATTGCAATTTATTCAAAATGATCAAAATGGACTTAGGCCCCTTT
TGATTTAAAGACAAGGAACTATGAATATGTTGATAAAAATGGTCAAAATG
GACCTTTTTCAAGGGGCTATAACTTCAGATTCAAAATCACGATTCTAATT
TTCATTANAGCGTACCAAAATGATTGGGGGTACCTAAATTTTTTTGGGGT
ACCTGAACCCTGGAGGACCCTATGTTTAGTGTTGACCAAATTTTGAAATT
TCAGGGGAAAATTCACAGATTTCCAAAAATCCCCTCCCATGGAGACAGCC
ATGAAAGTTTTTCAAAACTGGAAGCCGTTTTGACGTTTTGAAGCAGTTTT
GCCTTCAGATTCAAATAAAGGGGCAAACACTCCTGTGAATCTTCATTGGG
AACACTCTAGGTGGTGAGATCTTGTTTTCATTTTATTGTTTGTTTATCAT
TTCAGTTGATGAGAAGTCAATGATGGTGTTTGATCGCTTTGAAGAGTGGG
AACGTCAAAATGAATCCAAAACACAAAATAATAAAGTATGCTTCCATTTA
AAGACAATCATTATGAGATATTTTAAAGAAGGCTATGCGTAATATTTCCT
AATGAAAGTATTTTTTTTGGCCTCAACCTTAGTCAAAGTATTGGCACGCT
TTAAAAGGACTTTCCAGTGTCGCATGAAAAGATTTCCTGTTTAAGAATCG
AAAAAAATAACAGTTTGTGCCTGTCCAAAATTACCAGCGAACTTGTTGAA
AATTAAAAATACTGAGTAGAGATGGGGGAAACTTAATTGTAATTCTTCAT
TCTTTTTGTCAGGGCAAAAATGCGAAAAGTTATGGTATAGAAGAACAATA
CGGAATCAAGAAGAAGAAAAGGGAACCTGCAATCCCTACCACCACAACGT
TAGATAAATTTAATCAAAAAATCAAGAAATTGAATAAACACAAAAAAGTT
GAGAATTGGCTTAAAAGTAATGACGCAATTATTTCCGTACCCAAAGATAC
TCGAGAAAAGCCCAAAGAACGGAAAAGGTCTTCTTCTTCTGTAGAATCGA
GCACTAAACCTGCCCCACCCAAATGCAATAAACATATACCAATGAACACC
TCCTCCTCCAAGAAGCGAGAATCCTCTGATGCTAAAAAGAAGAAAAAGGA
CACTATTTTAATCGAAAGCACGGACGAGGATAATATTTCGGACACTTTTC
AAACTTACGAAAGAAAGGAAGTCAAAGTGAGTAGGTTTAAAGAAGAGGAT
GTATTCGATAATTTTGTTACCAAATCAAAAGTTGCACCACCGATCAAAAG
AACAATATCCAATCCGACTACACTGAGGGAGAAACAAGCCAAAATCCCTA
AAAAGACTCAACAGAATAGCTCAATGAATTTGAGTGTGAAAAAAGAGATC
AAGTCAGAGCTGAGTGAAGTGATTGTTAAAACGGAGAATCACAATAGCGA
TGAGATGGACCTTTATGATAACGAGACTCAGGACTCACGACAACCCATCG
AGGTGGAAGAGACTATTACTGTCAAAAAAGAAGTACGCAGTCCACAGAAG
AGAGTCATGCCTGCTTCATTTATCTTGAAACCTACAACTCAAGCTTCCAC
TCAGACGGATATTGCTGCTAATAATTTGAAAGAACTTATGAAATGTGAGG
GAGTTCCGGATAAACTGAAAAGTGANTGAAACCTACAACTCAAGCTTTCA
CTCAGACGGATATTGCTGCTAATAATTTGAAAGAACTTATGAAATGTGAG
GGAGTTCCGGATAAACTGAAAAGTGAAGCAGTCTTTAAATTCACCGTTAA
ATTAAAGAATGATCAAATTTGTCAAAGAGTTGAGAGGAAGGTGTTTGATT
CCAAAAAGAACAATTTGGCTTCATGGTTTGATTATATTTTAGACAATTAC
ATTTCAAAACACGAATACGAGGGTGAGGACGGTTATAACAGTTTCATCAC
CATGGATTCCATGTTCCGTGTGTTCTCGTGTGATGACGAGAAGAAAGTGC
CAGGGATGTTGGAAGTGCTAACGGATGGCTCCAATGAGGATAATTGGATG
CGAGGGATCAGGGAGCCGATCAGAATACACACAGTGATTGATCGACAACT
TTATGGAAACATCTTGGGAAATGATGCTCAAAGGTTACCTGATTTGATCA
TTACCAGACTCTTTCCGATTGACTCTATAGGTT

Coding sequence (CDS) from alignment at scaffold_469:445200..467982-

>TCONS_00067404 ID=TCONS_00067404|Name=TCONS_00067404|organism=Clytia hemisphaerica|type=CDS|length=1866bp|location=Sequence derived from alignment at scaffold_469:445200..467982- (Clytia hemisphaerica)
GGCAAAAATGCGAAAAGTTATGGTATAGAAGAACAATACGGAATCAAGAA
GAAGAAAAGGGAACCTGCAATCCCTACCACCACAACGTTAGATAAATTTA
ATCAAAAAATCAAGAAATTGAATAAACACAAAAAAGTTGAGAATTGGCTT
AAAAGTAATGACGCAATTATTTCCGTACCCAAAGATACTCGAGAAAAGCC
CAAAGAACGGAAAAGGTCTTCTTCTTCTGTAGAATCGAGCACTAAACCTG
CCCCACCCAAATGCAATAAACATATACCAATGAACACCTCCTCCTCCAAG
AAGCGAGAATCCTCTGATGCTAAAAAGAAGAAAAAGGACACTATTTTAAT
CGAAAGCACGGACGAGGATAATATTTCGGACACTTTTCAAACTTACGAAA
GAAAGGAAGTCAAAGTGAGTAGGTTTAAAGAAGAGGATGTATTCGATAAT
TTTGTTACCAAATCAAAAGTTGCACCACCGATCAAAAGAACAATATCCAA
TCCGACTACACTGAGGGAGAAACAAGCCAAAATCCCTAAAAAGACTCAAC
AGAATAGCTCAATGAATTTGAGTGTGAAAAAAGAGATCAAGTCAGAGCTG
AGTGAAGTGATTGTTAAAACGGAGAATCACAATAGCGATGAGATGGACCT
TTATGATAACGAGACTCAGGACTCACGACAACCCATCGAGGTGGAAGAGA
CTATTACTGTCAAAAAAGAAGTACGCAGTCCACAGAAGAGAGTCATGCCT
GCTTCATTTATCTTGAAACCTACAACTCAAGCTTCCACTCAGACGGATAT
TGCTGCTAATAATTTGAAAGAACTTATGAAATGTGAGGGAGTTCCGGATA
AACTGAAAAGTGANTGAATGATGGTGTTTGATCGCTTTGAAGAGTGGGAA
CGTCAAAATGAATCCAAAACACAAAATAATAAAGGCAAAAATGCGAAAAG
TTATGGTATAGAAGAACAATACGGAATCAAGAAGAAGAAAAGGGAACCTG
CAATCCCTACCACCACAACGTTAGATAAATTTAATCAAAAAATCAAGAAA
TTGAATAAACACAAAAAAGTTGAGAATTGGCTTAAAAGTAATGACGCAAT
TATTTCCGTACCCAAAGATACTCGAGAAAAGCCCAAAGAACGGAAAAGGT
CTTCTTCTTCTGTAGAATCGAGCACTAAACCTGCCCCACCCAAATGCAAT
AAACATATACCAATGAACACCTCCTCCTCCAAGAAGCGAGAATCCTCTGA
TGCTAAAAAGAAGAAAAAGGACACTATTTTAATCGAAAGCACGGACGAGG
ATAATATTTCGGACACTTTTCAAACTTACGAAAGAAAGGAAGTCAAAGTG
AGTAGGTTTAAAGAAGAGGATGTATTCGATAATTTTGTTACCAAATCAAA
AGTTGCACCACCGATCAAAAGAACAATATCCAATCCGACTACACTGAGGG
AGAAACAAGCCAAAATCCCTAAAAAGACTCAACAGAATAGCTCAATGAAT
TTGAGTGTGAAAAAAGAGATCAAGTCAGAGCTGAGTGAAGTGATTGTTAA
AACGGAGAATCACAATAGCGATGAGATGGACCTTTATGATAACGAGACTC
AGGACTCACGACAACCCATCGAGGTGGAAGAGACTATTACTGTCAAAAAA
GAAGTACGCAGTCCACAGAAGAGAGTCATGCCTGCTTCATTTATCTTGAA
ACCTACAACTCAAGCTTCCACTCAGACGGATATTGCTGCTAATAATTTGA
AAGAACTTATGAAATGTGAGGGAGTTCCGGATAAACTGAAAAGTGANTGA
ATGATGGTGTTTGATCGCTTTGAAGAGTGGGAACGTCAAAATGAATCCAA
AACACAAAATAATAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_042098XLOC_042098Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00067404-proteinTCONS_00067404-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00067404-exon-scaffold_469-1575043694:467829..467982TCONS_00067404-exon-scaffold_469-1575043694:467829..467982Clytia hemisphaericaexon
TCONS_00067404-exon-scaffold_469-1575043694:446848..446927TCONS_00067404-exon-scaffold_469-1575043694:446848..446927Clytia hemisphaericaexon
TCONS_00067404-exon-scaffold_469-1575043694:445200..446570TCONS_00067404-exon-scaffold_469-1575043694:445200..446570Clytia hemisphaericaexon
TCONS_00067404-exon-scaffold_469-1510915933:467829..467982TCONS_00067404-exon-scaffold_469-1510915933:467829..467982Clytia hemisphaericaexon
TCONS_00067404-exon-scaffold_469-1510915933:446848..446927TCONS_00067404-exon-scaffold_469-1510915933:446848..446927Clytia hemisphaericaexon
TCONS_00067404-exon-scaffold_469-1510915933:445200..446570TCONS_00067404-exon-scaffold_469-1510915933:445200..446570Clytia hemisphaericaexon
TCONS_00067404-exon-scaffold_469-1491911889:467829..467982TCONS_00067404-exon-scaffold_469-1491911889:467829..467982Clytia hemisphaericaexon
TCONS_00067404-exon-scaffold_469-1491911889:446848..446927TCONS_00067404-exon-scaffold_469-1491911889:446848..446927Clytia hemisphaericaexon
TCONS_00067404-exon-scaffold_469-1491911889:445200..446570TCONS_00067404-exon-scaffold_469-1491911889:445200..446570Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_469supercontigscaffold_469:445200..467982 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
11.9519	10.3776	2.16193	1.59311	12.391	12.6534	11.2574	13.172	8.9599	6.33941	8.2768	8.60524	5.76036	7.56949	3.50524	4.48038	4.99428	7.99365	3.02103	6.46333	7.13021	8.49988	10.1927	10.896	8.40623	13.4355	2.70664	2.3746	7.22307	7.20258
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00067404 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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