TCONS_00067376 (transcript) - C. hemisphaerica

Overview
NameTCONS_00067376
Unique NameTCONS_00067376
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3816

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00067376 ID=TCONS_00067376|Name=TCONS_00067376|organism=Clytia hemisphaerica|type=transcript|length=3816bp
aagaaatgtttgtttacatattTGATTTCTTTCGAACTCACTTTCGAATA
TTTTATTTTCGAGCCAACCAAATATTTATGTTTGGAAGTAATTAGAGTAc
aataattaaataaataaaacttaaaaactgTAATAAGTGGACATTTGACT
GACTTGATGTTTCCACGATGAAGAATCAATTGtgtttggttttgattttt
ctgctgGGAGCGTTTCATTTCATCCAATGCAAACGACTGATCAGAGATAC
TTTGAAATCAGAAGACGATGAAATCTTAGCTGAATCCTTCCCTCAACAAA
AAGAACCTTCGACCAACAAGAAACGACAATATATTGAACAATCACAACAA
AAACCTATCGTGGAGACAGTCCCTGATTCACCAACACCACGCAACTATAA
AGCAGACGCAGAGAGCATTGTGGGTGATGTGGGCCGCTATGGTTTATGGG
AATACACGTCAGATAATACTGGAATGGGAGACCAAATCAAAGAATTGATG
TCCAAAGCAGACAAAATCGATGAAACAGGTGGGGCAGCTCATAATTTGGA
AAACGAGGCTCACAAGATGAACGACGAGATCAATAAATATGCGGAAGCAT
CTCAATACCCTCAACAATCCAACATCGATCCCCTGGAACAACCTGCGGAA
ATGGATCACGCGTCTCCCGCATCGAGTGCCAAGGAAAGCGAAGGAGGATC
AGTGGCAGGTCAGAATGGACACGAAGATGTGAGCGTTGTGAATATTCCTT
CAGCGTTGACCATCGAAGATGAGCACGGACATCATTTAGACACAGTCAAC
CCTCAACCAATCAAAGCAGACGAATCATCCAAACAAACGTTGCCTAGCAA
CAAAGAGAAGACAGTTGAACTGACGATTGAGAAACCATTAGCAACAAACG
TGACATCGGGTGATAAAAGAGAGCAATCAGCTCCCAATGATGAAAAAGGA
TCCTTCACTCTTCGACTGCTGAAAGCGATGGAGAAAAGTACAGATTTTCG
TAAGAAAGCAGAAGCCTTTCTACCTAAACCTTCAGATAACGCTTTGCAAT
TATACCAAAAAGATAAAGAATTGTCAACTTTACTCAAAGAATTCGACAAT
GCGCAAACAAGCAAAAAGCTCACTGAAACAACGGCTGAATCCAAACTACA
CATCCCTCAATACAAAAAGTCGGACGGAAAATTGTTGTCCAATATAAAGC
TCTTGATACACGATGACTATAGCTCTCACCAAGAAGAGCAAGAcgttttg
aaagatttattgAAAACAATGAACGGTGCTGAGAAAGTCGAAGGAAAGAT
CGAGCATGATTTCACTGATGCGAGCGCCGGCGGAGGCGGACAAACGCTCT
CGGATGGTTATTTGAACCAttttaaagagtttttggagAAGCACAGACAA
GAGGGGTTTGATCACGAGGATAACCATGCACATCAAGCAGCTGACGTCCC
ACATGGAGAAGACGGACATGCACTTGTGAAATTTCTTGCAAAGGAAGCTT
CATCTTTTAACAAATTCCGTGAATCCAACACCAAAAATCCCAAACAAGAT
CTGGAGCGCTTGGAAGCCATGATCGCCAAACAAGAAAGCGTAGAAGAACC
GCTTGACGCTAAGAATGAGAAGTTATTGCAGGAGCAGTTGAAACAACTCA
ACGAGGATAAAAGCCATAGTGAGAAAGCACTGGCCAACCTAAAGGCGCAT
AACGGGGATAGTAAAATGAAAGTGGCTACCATTGATGACCACCATACAGG
CATAATACCAAAGGCTGAGGTGCAGGTTTTCGATAacagtatattgaaat
atatccaaacatcaaaacattttcaagatttcCTCAAAGAAAAAGGCGTG
TTGGCGGGAACACCTACAGCCGCCCAAAAACCTACCGAAGGAAGTACACG
GGAGTTGGATGATCAGTTGTTCGAGCGGCCACTAGCGGAACAATTCGAAG
AAAttgaattacaaaaagaaatctTGAATTTGAAAGAACGTCAATTGAGA
AATCGTGATCGGaataaaaccttgaaaaagaaagagagtGAATCGGTTGC
AAAGGCCATGGCTCAAGCAAAAGCGAATCACAAACTATATTTAACAAACC
CTGAACGTGAAAAGATAAGTGACAACAAAGCGGATGAAGAAACcgaaaaa
gactttgaaaaattggaacATTTCGCAAAACAGTACAAGAAGCTGCAGGA
AGTAAAAGAACGAGAGAAGCAACGAGAAAAGGAAGAAGTGAAATTGAAAG
CGAAAAAGGTTGAACAAATAACACCAAATGTAAAAGATGAAGTGTCGAAA
GTCGACGAGGAAACCGCAGGAAGTGGAGAACAGGCTAGTGGGAGTGGCGT
AGAGGAAAATAATGACGTCGTAAGATTAGAGACAGGGGAATCCCCAAGAC
AAGAAGAAGTTGAGTCTCTGGCAACAAACAAAGAAAGGGATTCCCTGGTG
ACATCAAAGAATGAAGAATTTGCTAAATTATCAGGCGATGGAGAGATCAA
ACTGGCCAACACGTCAGCCCCAGTTGAAGAGACTTCAGACGATCACGGAT
TTTCCAAAAGTACAACCGTNAACACGTCAGCCCCAGTTGAAAAGACTTCA
GACGATCACGGATTTTCCAAAAGTATAACCGTAAAACCGGAAATCGCTGA
TGAGTCATCTCGTTTCCATGGCATCAAATTCAAGAATGTCAGTCTAGTGA
CAGCCGATCACGAGCAAAGGCTAATGTTACCCATCAACAACCCAAAACCT
GAAGCAGACACCACTCTTACTCCACACGCCGACTTCCACCCTTCGAAATC
ACTGCTCAGAGTCATCCGCCCGATGTCTAACGCAACAAGGCGCCACTACA
CCCCATCTAGAAGCCACGTCTCTGACGTTACGGCCGCACGGTTACGTATG
AATGCGGAAATAATTTCTCCTGACGATGTAGGTAAATCGGATATTGCAAA
TGTTAAGCTACACACAGTACCTGTGCGTAAACCGAACGCAAATTTCCCGA
TTCTGGAACCACCCTCACCGCCCACAAGTAAAAGAGGTCAAGGGATAGAG
AACGCCTTAATACACGCTAACACAATCGTGCACCCCATCCAATCGCCAAT
AAGCAACCCTTCAAATCTTCTCAAACATAAAGACATACCAGTGCCAAAAA
TAGAGAAGAAAAATATTCGGATGTTCATTCATTCCATCTCACCAAAGCAT
TCACATTTCATACGACCGCATTCAGTCAGCACGCACGATGAGCGGGCGGT
CAAGAAAGGGTTCGGTAAATTACCGCAAAAACCGAAAGAGTATTTACTGC
GTGAGTTGCAGAAAGACATTAATTTATTGGACAAGAAATCAACTACAGTT
CAAaacagtaaacaaaaaaattcttttgactcAGCAAAGAGACTTAGTGT
TCCTGTAACAATAAAGAAAGGCCAAACCAAAGCGCAAAGCATTCTGGTCC
CGTCGTCaataaaaaagaacaacatGGTCATTAAACCAAGTAGTAAATTA
ACGCGAAATACGAAACGTTCGAACGTGCAAATTGAAGAGGTTTTTAACTT
GTTGAAAAGTGAAGATCAACCTTAATTATGGAATTACGTGGAAGAAAGGG
TTAAGAAGGGATAAAAGCCCAAATTGGCTACAAACCCTAACTGAAAAGGG
CATACAATTTTAATACCATGGGTCACATGAAGTTTTTTAGCGTGAGAGAT
ATGAAAGTTggagcctttcaagtgttttgacgcaaattcgatttctCCCT
ACTGCAAagggcttcaaaagtttaaagtgacgtcaaaaaatcgaatgttt
ggagcccgaaaacctg
Run BLAST on NCBI

protein sequence of TCONS_00067376-protein

>TCONS_00067376-protein ID=TCONS_00067376-protein|Name=TCONS_00067376-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1135bp
MKNQLCLVLIFLLGAFHFIQCKRLIRDTLKSEDDEILAESFPQQKEPSTN
KKRQYIEQSQQKPIVETVPDSPTPRNYKADAESIVGDVGRYGLWEYTSDN
TGMGDQIKELMSKADKIDETGGAAHNLENEAHKMNDEINKYAEASQYPQQ
SNIDPLEQPAEMDHASPASSAKESEGGSVAGQNGHEDVSVVNIPSALTIE
DEHGHHLDTVNPQPIKADESSKQTLPSNKEKTVELTIEKPLATNVTSGDK
REQSAPNDEKGSFTLRLLKAMEKSTDFRKKAEAFLPKPSDNALQLYQKDK
ELSTLLKEFDNAQTSKKLTETTAESKLHIPQYKKSDGKLLSNIKLLIHDD
YSSHQEEQDVLKDLLKTMNGAEKVEGKIEHDFTDASAGGGGQTLSDGYLN
HFKEFLEKHRQEGFDHEDNHAHQAADVPHGEDGHALVKFLAKEASSFNKF
RESNTKNPKQDLERLEAMIAKQESVEEPLDAKNEKLLQEQLKQLNEDKSH
SEKALANLKAHNGDSKMKVATIDDHHTGIIPKAEVQVFDNSILKYIQTSK
HFQDFLKEKGVLAGTPTAAQKPTEGSTRELDDQLFERPLAEQFEEIELQK
EILNLKERQLRNRDRNKTLKKKESESVAKAMAQAKANHKLYLTNPEREKI
SDNKADEETEKDFEKLEHFAKQYKKLQEVKEREKQREKEEVKLKAKKVEQ
ITPNVKDEVSKVDEETAGSGEQASGSGVEENNDVVRLETGESPRQEEVES
LATNKERDSLVTSKNEEFAKLSGDGEIKLANTSAPVEETSDDHGFSKSTT
XNTSAPVEKTSDDHGFSKSITVKPEIADESSRFHGIKFKNVSLVTADHEQ
RLMLPINNPKPEADTTLTPHADFHPSKSLLRVIRPMSNATRRHYTPSRSH
VSDVTAARLRMNAEIISPDDVGKSDIANVKLHTVPVRKPNANFPILEPPS
PPTSKRGQGIENALIHANTIVHPIQSPISNPSNLLKHKDIPVPKIEKKNI
RMFIHSISPKHSHFIRPHSVSTHDERAVKKGFGKLPQKPKEYLLRELQKD
INLLDKKSTTVQNSKQKNSFDSAKRLSVPVTIKKGQTKAQSILVPSSIKK
NNMVIKPSSKLTRNTKRSNVQIEEVFNLLKSEDQP
Run BLAST on NCBI

transcript from alignment at scaffold_469:216622..221804-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00067376 ID=TCONS_00067376|Name=TCONS_00067376|organism=Clytia hemisphaerica|type=transcript|length=5183bp|location=Sequence derived from alignment at scaffold_469:216622..221804- (Clytia hemisphaerica)
AAGAAATGTTTGTTTACATATTTGATTTCTTTCGAACTCACTTTCGAATA TTTTATTTTCGAGCCAACCAAATATTTATGTTTGGAAGTAATTAGAGTAC AATAATTAAATAAATAAAACTTAAAAACTGTAATAAGTGGACATTTGACT GACTTGATGTTTCCACGATGAAGAATCAATTGTGTTTGGTTTTGATTTTT CTGCTGGGAGCGTTTCATTTCATCCAATGCAAACGACTGATCAGAGGTAA AACAACTCTCAGAACTCTTTCATATTCTTTCTGTCGCTTCATATCATCGG TTTCCTAAAAAGGAAATGGAATTCCAATAAAAAAAGGCTCGTACAGGCTC CAAGCTCGGGATTGCAGGCTTTGCTTTGACTGAAAAATATTTTGTCATCA GCATCCAAATGGTAAAAGGTTTTTCAATAAATTCGATCTAAGATACTTTC TATGTCCTGCTGTGATAATTACCGGATCTATTGTCTTATGCTGAATCATG ATATTCACGACGTAATGTTTTATACGGAAGCACCTGAAAAACCGGATGTT TGTTACGAATTTCGAATATAAACAAAACCGTACTTACGATTAACAGTCAT AAGAGAGACGAGCCAAGATGGCCGCCTTAAAGAGATACAGCAAGAAGTTT ATCTCACATAAAACGTTAGCTTGGTTTTATCATTTTTTAAAGTGGTTGTA CCGCAGCACTATAATTTTTTTTGTCAATTTGCGCGTTTGATCGTTGTGTG AACTTTTGAATTGTTAACAGTGAACACAACTACACGCTTTTTTGACGTCA CTTTTAACTTTATAAGAATGTCCATGATGAAAATGACCAAAAAATTAAGA ATATGCTAAGAATATCACCATCATGGAATTTTGAGACGTATGTACTAAAT GTTAAATCTAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNAATGCTGTAAGAATATTTTAGGATGATTTTCCCA AAAAAGTTAAGAATATCCATGATGAAATGGATTTACACCATTCTTATAAA AAAAAAGCGTGTATTGGCAAACGCACGAATATCATGAATAAGTGTACTAT AGTAGACTCTTCATAGCTCGGACCTCTTTGATTTAAGCTTCTTTAGTTTG AACAAACTTTCTTGTCCAAACTTCACCCCATACAGCATAAGATGGAAACC TTTTAATTGATGTCTCTGATTCATCCATAGATACTTTGAAATCAGAAGAC GATGAAATCTTAGCTGAATCCTTCCCTCAACAAAAAGAACCTTCGACCAA CAAGAAACGACAATATATTGAACAATCACAACAAAAACCTATCGTGGAGA CAGTCCCTGATTCACCAACACCACGCAACTATAAAGCAGACGCAGAGAGC ATTGTGGGTGATGTGGGCCGCTATGGTTTATGGGAATACACGTCAGATAA TACTGGAATGGGAGACCAAATCAAAGAATTGATGTCCAAAGCAGACAAAA TCGATGAAACAGGTGGGGCAGCTCATAATTTGGAAAACGAGGCTCACAAG ATGAACGACGAGATCAATAAATATGCGGAAGCATCTCAATACCCTCAACA ATCCAACATCGATCCCCTGGAACAACCTGCGGAAATGGATCACGCGTCTC CCGCATCGAGTGCCAAGGAAAGCGAAGGAGGATCAGTGGCAGGTCAGAAT GGACACGAAGATGTGAGCGTTGTGAATATTCCTTCAGCGTTGACCATCGA AGATGAGCACGGACATCATTTAGACACAGTCAACCCTCAACCAATCAAAG CAGACGAATCATCCAAACAAACGTTGCCTAGCAACAAAGAGAAGACAGTT GAACTGACGATTGAGAAACCATTAGCAACAAACGTGACATCGGGTGATAA AAGAGAGCAATCAGCTCCCAATGATGAAAAAGGATCCTTCACTCTTCGAC TGCTGAAAGCGATGGAGAAAAGTACAGATTTTCGTAAGAAAGCAGAAGCC TTTCTACCTAAACCTTCAGATAACGCTTTGCAATTATACCAAAAAGATAA AGAATTGTCAACTTTACTCAAAGAATTCGACAATGCGCAAACAAGCAAAA AGCTCACTGAAACAACGGCTGAATCCAAACTACACATCCCTCAATACAAA AAGTCGGACGGAAAATTGTTGTCCAATATAAAGCTCTTGATACACGATGA CTATAGCTCTCACCAAGAAGAGCAAGACGTTTTGAAAGATTTATTGAAAA CAATGAACGGTGCTGAGAAAGTCGAAGGAAAGATCGAGCATGATTTCACT GATGCGAGCGCCGGCGGAGGCGGACAAACGCTCTCGGATGGTTATTTGAA CCATTTTAAAGAGTTTTTGGAGAAGCACAGACAAGAGGGGTTTGATCACG AGGATAACCATGCACATCAAGCAGCTGACGTCCCACATGGAGGTATGGAG TCTGTTTAATCAATTATCGTTCACATTGACAAGTTAGTTTTTCCTGAGTT CCTAGTTATGAGTCTGGGAGGATCAGAATCAAGAAGGGCCAACTCTATGT TACCTTTTCTATTTTGTTGAAGAATTTCATTTTAAAGTGAGGTAAACGAA AAATAATTTTCTTCAGGAAGCTCGAAATAACTAATTTGCTTATCTGTATT TTATATATAATCCAAAGATTTTACCATCAAAGATAAAAATGATTTAAAGA CCTTTTGAATTTTTTTCGTTTTCAGAAGACGGACATGCACTTGTGAAATT TCTTGCAAAGGAAGCTTCATCTTTTAACAAATTCCGTGAATCCAACACCA AAAATCCCAAACAAGATCTGGAGCGCTTGGAAGCCATGATCGCCAAACAA GAAAGCGTAGAAGAACCGCTTGACGCTAAGAATGAGAAGTTATTGCAGGA GCAGTTGAAACAACTCAACGAGGATAAAAGCCATAGTGAGAAAGCACTGG CCAACCTAAAGGCGCATAACGGGGATAGTAAAATGAAAGTGGCTACCATT GATGACCACCATACAGGCATAATACCAAAGGCTGAGGTGCAGGTTTTCGA TAACAGTATATTGAAATATATCCAAACATCAAAACATTTTCAAGATTTCC TCAAAGAAAAAGGCGTGTTGGCGGGAACACCTACAGCCGCCCAAAAACCT ACCGAAGGAAGTACACGGGAGTTGGATGATCAGTTGTTCGAGCGGCCACT AGCGGAACAATTCGAAGAAATTGAATTACAAAAAGAAATCTTGAATTTGA AAGAACGTCAATTGAGAAATCGTGATCGGAATAAAACCTTGAAAAAGAAA GAGAGTGAATCGGTTGCAAAGGCCATGGCTCAAGCAAAAGCGAATCACAA ACTATATTTAACAAACCCTGAACGTGAAAAGATAAGTGACAACAAAGCGG ATGAAGAAACCGAAAAAGACTTTGAAAAATTGGAACATTTCGCAAAACAG TACAAGAAGCTGCAGGAAGTAAAAGAACGAGAGAAGCAACGAGAAAAGGA AGAAGTGAAATTGAAAGCGAAAAAGGTTGAACAAATAACACCAAATGTAA AAGATGAAGTGTCGAAAGTCGACGAGGAAACCGCAGGAAGTGGAGAACAG GCTAGTGGGAGTGGCGTAGAGGAAAATAATGACGTCGTAAGATTAGAGAC AGGGGAATCCCCAAGACAAGAAGAAGTTGAGTCTCTGGCAACAAACAAAG AAAGGGATTCCCTGGTGACATCAAAGAATGAAGAATTTGCTAAATTATCA GGCGATGGAGAGATCAAACTGGCCAACACGTCAGCCCCAGTTGAAGAGAC TTCAGACGATCACGGATTTTCCAAAAGTACAACCGTNAACACGTCAGCCC CAGTTGAAAAGACTTCAGACGATCACGGATTTTCCAAAAGTATAACCGTA AAACCGGAAATCGCTGATGAGTCATCTCGTTTCCATGGCATCAAATTCAA GAATGTCAGTCTAGTGACAGCCGATCACGAGCAAAGGCTAATGTTACCCA TCAACAACCCAAAACCTGAAGCAGACACCACTCTTACTCCACACGCCGAC TTCCACCCTTCGAAATCACTGCTCAGAGTCATCCGCCCGATGTCTAACGC AACAAGGCGCCACTACACCCCATCTAGAAGCCACGTCTCTGACGTTACGG CCGCACGGTTACGTATGAATGCGGAAATAATTTCTCCTGACGATGTAGGT AAATCGGATATTGCAAATGTTAAGCTACACACAGTACCTGTGCGTAAACC GAACGCAAATTTCCCGATTCTGGAACCACCCTCACCGCCCACAAGTAAAA GAGGTCAAGGGATAGAGAACGCCTTAATACACGCTAACACAATCGTGCAC CCCATCCAATCGCCAATAAGCAACCCTTCAAATCTTCTCAAACATAAAGA CATACCAGTGCCAAAAATAGAGAAGAAAAATATTCGGATGTTCATTCATT CCATCTCACCAAAGCATTCACATTTCATACGACCGCATTCAGTCAGCACG CACGATGAGCGGGCGGTCAAGAAAGGGTTCGGTAAATTACCGCAAAAACC GAAAGAGTATTTACTGCGTGAGTTGCAGAAAGACATTAATTTATTGGACA AGAAATCAACTACAGTTCAAAACAGTAAACAAAAAAATTCTTTTGACTCA GCAAAGAGACTTAGTGTTCCTGTAACAATAAAGAAAGGCCAAACCAAAGC GCAAAGCATTCTGGTCCCGTCGTCAATAAAAAAGAACAACATGGTCATTA AACCAAGTAGTAAATTAACGCGAAATACGAAACGTTCGAACGTGCAAATT GAAGAGGTTTTTAACTTGTTGAAAAGTGAAGATCAACCTTAATTATGGAA TTACGTGGAAGAAAGGGTTAAGAAGGGATAAAAGCCCAAATTGGCTACAA ACCCTAACTGAAAAGGGCATACAATTTTAATACCATGGGTCACATGAAGT TTTTTAGCGTGAGAGATATGAAAGTTGGAGCCTTTCAAGTGTTTTGACGC AAATTCGATTTCTCCCTACTGCAAAGGGCTTCAAAAGTTTAAAGTGACGT CAAAAAATCGAATGTTTGGAGCCCGAAAACCTG

Coding sequence (CDS) from alignment at scaffold_469:216622..221804-

>TCONS_00067376 ID=TCONS_00067376|Name=TCONS_00067376|organism=Clytia hemisphaerica|type=CDS|length=10224bp|location=Sequence derived from alignment at scaffold_469:216622..221804- (Clytia hemisphaerica)
AAGACGGACATGCACTTGTGAAATTTCTTGCAAAGGAAGCTTCATCTTTT
AACAAATTCCGTGAATCCAACACCAAAAATCCCAAACAAGATCTGGAGCG
CTTGGAAGCCATGATCGCCAAACAAGAAAGCGTAGAAGAACCGCTTGACG
CTAAGAATGAGAAGTTATTGCAGGAGCAGTTGAAACAACTCAACGAGGAT
AAAAGCCATAGTGAGAAAGCACTGGCCAACCTAAAGGCGCATAACGGGGA
TAGTAAAATGAAAGTGGCTACCATTGATGACCACCATACAGGCATAATAC
CAAAGGCTGAGGTGCAGGTTTTCGATAACAGTATATTGAAATATATCCAA
ACATCAAAACATTTTCAAGATTTCCTCAAAGAAAAAGGCGTGTTGGCGGG
AACACCTACAGCCGCCCAAAAACCTACCGAAGGAAGTACACGGGAGTTGG
ATGATCAGTTGTTCGAGCGGCCACTAGCGGAACAATTCGAAGAAATTGAA
TTACAAAAAGAAATCTTGAATTTGAAAGAACGTCAATTGAGAAATCGTGA
TCGGAATAAAACCTTGAAAAAGAAAGAGAGTGAATCGGTTGCAAAGGCCA
TGGCTCAAGCAAAAGCGAATCACAAACTATATTTAACAAACCCTGAACGT
GAAAAGATAAGTGACAACAAAGCGGATGAAGAAACCGAAAAAGACTTTGA
AAAATTGGAACATTTCGCAAAACAGTACAAGAAGCTGCAGGAAGTAAAAG
AACGAGAGAAGCAACGAGAAAAGGAAGAAGTGAAATTGAAAGCGAAAAAG
GTTGAACAAATAACACCAAATGTAAAAGATGAAGTGTCGAAAGTCGACGA
GGAAACCGCAGGAAGTGGAGAACAGGCTAGTGGGAGTGGCGTAGAGGAAA
ATAATGACGTCGTAAGATTAGAGACAGGGGAATCCCCAAGACAAGAAGAA
GTTGAGTCTCTGGCAACAAACAAAGAAAGGGATTCCCTGGTGACATCAAA
GAATGAAGAATTTGCTAAATTATCAGGCGATGGAGAGATCAAACTGGCCA
ACACGTCAGCCCCAGTTGAAGAGACTTCAGACGATCACGGATTTTCCAAA
AGTACAACCGTNAACACGTCAGCCCCAGTTGAAAAGACTTCAGACGATCA
CGGATTTTCCAAAAGTATAACCGTAAAACCGGAAATCGCTGATGAGTCAT
CTCGTTTCCATGGCATCAAATTCAAGAATGTCAGTCTAGTGACAGCCGAT
CACGAGCAAAGGCTAATGTTACCCATCAACAACCCAAAACCTGAAGCAGA
CACCACTCTTACTCCACACGCCGACTTCCACCCTTCGAAATCACTGCTCA
GAGTCATCCGCCCGATGTCTAACGCAACAAGGCGCCACTACACCCCATCT
AGAAGCCACGTCTCTGACGTTACGGCCGCACGGTTACGTATGAATGCGGA
AATAATTTCTCCTGACGATGTAGGTAAATCGGATATTGCAAATGTTAAGC
TACACACAGTACCTGTGCGTAAACCGAACGCAAATTTCCCGATTCTGGAA
CCACCCTCACCGCCCACAAGTAAAAGAGGTCAAGGGATAGAGAACGCCTT
AATACACGCTAACACAATCGTGCACCCCATCCAATCGCCAATAAGCAACC
CTTCAAATCTTCTCAAACATAAAGACATACCAGTGCCAAAAATAGAGAAG
AAAAATATTCGGATGTTCATTCATTCCATCTCACCAAAGCATTCACATTT
CATACGACCGCATTCAGTCAGCACGCACGATGAGCGGGCGGTCAAGAAAG
GGTTCGGTAAATTACCGCAAAAACCGAAAGAGTATTTACTGCGTGAGTTG
CAGAAAGACATTAATTTATTGGACAAGAAATCAACTACAGTTCAAAACAG
TAAACAAAAAAATTCTTTTGACTCAGCAAAGAGACTTAGTGTTCCTGTAA
CAATAAAGAAAGGCCAAACCAAAGCGCAAAGCATTCTGGTCCCGTCGTCA
ATAAAAAAGAACAACATGGTCATTAAACCAAGTAGTAAATTAACGCGAAA
TACGAAACGTTCGAACGTGCAAATTGAAGAGGTTTTTAACTTGTTGAAAA
GTGAAGATCAACCTTAAATACTTTGAAATCAGAAGACGATGAAATCTTAG
CTGAATCCTTCCCTCAACAAAAAGAACCTTCGACCAACAAGAAACGACAA
TATATTGAACAATCACAACAAAAACCTATCGTGGAGACAGTCCCTGATTC
ACCAACACCACGCAACTATAAAGCAGACGCAGAGAGCATTGTGGGTGATG
TGGGCCGCTATGGTTTATGGGAATACACGTCAGATAATACTGGAATGGGA
GACCAAATCAAAGAATTGATGTCCAAAGCAGACAAAATCGATGAAACAGG
TGGGGCAGCTCATAATTTGGAAAACGAGGCTCACAAGATGAACGACGAGA
TCAATAAATATGCGGAAGCATCTCAATACCCTCAACAATCCAACATCGAT
CCCCTGGAACAACCTGCGGAAATGGATCACGCGTCTCCCGCATCGAGTGC
CAAGGAAAGCGAAGGAGGATCAGTGGCAGGTCAGAATGGACACGAAGATG
TGAGCGTTGTGAATATTCCTTCAGCGTTGACCATCGAAGATGAGCACGGA
CATCATTTAGACACAGTCAACCCTCAACCAATCAAAGCAGACGAATCATC
CAAACAAACGTTGCCTAGCAACAAAGAGAAGACAGTTGAACTGACGATTG
AGAAACCATTAGCAACAAACGTGACATCGGGTGATAAAAGAGAGCAATCA
GCTCCCAATGATGAAAAAGGATCCTTCACTCTTCGACTGCTGAAAGCGAT
GGAGAAAAGTACAGATTTTCGTAAGAAAGCAGAAGCCTTTCTACCTAAAC
CTTCAGATAACGCTTTGCAATTATACCAAAAAGATAAAGAATTGTCAACT
TTACTCAAAGAATTCGACAATGCGCAAACAAGCAAAAAGCTCACTGAAAC
AACGGCTGAATCCAAACTACACATCCCTCAATACAAAAAGTCGGACGGAA
AATTGTTGTCCAATATAAAGCTCTTGATACACGATGACTATAGCTCTCAC
CAAGAAGAGCAAGACGTTTTGAAAGATTTATTGAAAACAATGAACGGTGC
TGAGAAAGTCGAAGGAAAGATCGAGCATGATTTCACTGATGCGAGCGCCG
GCGGAGGCGGACAAACGCTCTCGGATGGTTATTTGAACCATTTTAAAGAG
TTTTTGGAGAAGCACAGACAAGAGGGGTTTGATCACGAGGATAACCATGC
ACATCAAGCAGCTGACGTCCCACATGGAGATGAAGAATCAATTGTGTTTG
GTTTTGATTTTTCTGCTGGGAGCGTTTCATTTCATCCAATGCAAACGACT
GATCAGAGAAGACGGACATGCACTTGTGAAATTTCTTGCAAAGGAAGCTT
CATCTTTTAACAAATTCCGTGAATCCAACACCAAAAATCCCAAACAAGAT
CTGGAGCGCTTGGAAGCCATGATCGCCAAACAAGAAAGCGTAGAAGAACC
GCTTGACGCTAAGAATGAGAAGTTATTGCAGGAGCAGTTGAAACAACTCA
ACGAGGATAAAAGCCATAGTGAGAAAGCACTGGCCAACCTAAAGGCGCAT
AACGGGGATAGTAAAATGAAAGTGGCTACCATTGATGACCACCATACAGG
CATAATACCAAAGGCTGAGGTGCAGGTTTTCGATAACAGTATATTGAAAT
ATATCCAAACATCAAAACATTTTCAAGATTTCCTCAAAGAAAAAGGCGTG
TTGGCGGGAACACCTACAGCCGCCCAAAAACCTACCGAAGGAAGTACACG
GGAGTTGGATGATCAGTTGTTCGAGCGGCCACTAGCGGAACAATTCGAAG
AAATTGAATTACAAAAAGAAATCTTGAATTTGAAAGAACGTCAATTGAGA
AATCGTGATCGGAATAAAACCTTGAAAAAGAAAGAGAGTGAATCGGTTGC
AAAGGCCATGGCTCAAGCAAAAGCGAATCACAAACTATATTTAACAAACC
CTGAACGTGAAAAGATAAGTGACAACAAAGCGGATGAAGAAACCGAAAAA
GACTTTGAAAAATTGGAACATTTCGCAAAACAGTACAAGAAGCTGCAGGA
AGTAAAAGAACGAGAGAAGCAACGAGAAAAGGAAGAAGTGAAATTGAAAG
CGAAAAAGGTTGAACAAATAACACCAAATGTAAAAGATGAAGTGTCGAAA
GTCGACGAGGAAACCGCAGGAAGTGGAGAACAGGCTAGTGGGAGTGGCGT
AGAGGAAAATAATGACGTCGTAAGATTAGAGACAGGGGAATCCCCAAGAC
AAGAAGAAGTTGAGTCTCTGGCAACAAACAAAGAAAGGGATTCCCTGGTG
ACATCAAAGAATGAAGAATTTGCTAAATTATCAGGCGATGGAGAGATCAA
ACTGGCCAACACGTCAGCCCCAGTTGAAGAGACTTCAGACGATCACGGAT
TTTCCAAAAGTACAACCGTNAACACGTCAGCCCCAGTTGAAAAGACTTCA
GACGATCACGGATTTTCCAAAAGTATAACCGTAAAACCGGAAATCGCTGA
TGAGTCATCTCGTTTCCATGGCATCAAATTCAAGAATGTCAGTCTAGTGA
CAGCCGATCACGAGCAAAGGCTAATGTTACCCATCAACAACCCAAAACCT
GAAGCAGACACCACTCTTACTCCACACGCCGACTTCCACCCTTCGAAATC
ACTGCTCAGAGTCATCCGCCCGATGTCTAACGCAACAAGGCGCCACTACA
CCCCATCTAGAAGCCACGTCTCTGACGTTACGGCCGCACGGTTACGTATG
AATGCGGAAATAATTTCTCCTGACGATGTAGGTAAATCGGATATTGCAAA
TGTTAAGCTACACACAGTACCTGTGCGTAAACCGAACGCAAATTTCCCGA
TTCTGGAACCACCCTCACCGCCCACAAGTAAAAGAGGTCAAGGGATAGAG
AACGCCTTAATACACGCTAACACAATCGTGCACCCCATCCAATCGCCAAT
AAGCAACCCTTCAAATCTTCTCAAACATAAAGACATACCAGTGCCAAAAA
TAGAGAAGAAAAATATTCGGATGTTCATTCATTCCATCTCACCAAAGCAT
TCACATTTCATACGACCGCATTCAGTCAGCACGCACGATGAGCGGGCGGT
CAAGAAAGGGTTCGGTAAATTACCGCAAAAACCGAAAGAGTATTTACTGC
GTGAGTTGCAGAAAGACATTAATTTATTGGACAAGAAATCAACTACAGTT
CAAAACAGTAAACAAAAAAATTCTTTTGACTCAGCAAAGAGACTTAGTGT
TCCTGTAACAATAAAGAAAGGCCAAACCAAAGCGCAAAGCATTCTGGTCC
CGTCGTCAATAAAAAAGAACAACATGGTCATTAAACCAAGTAGTAAATTA
ACGCGAAATACGAAACGTTCGAACGTGCAAATTGAAGAGGTTTTTAACTT
GTTGAAAAGTGAAGATCAACCTTAAATACTTTGAAATCAGAAGACGATGA
AATCTTAGCTGAATCCTTCCCTCAACAAAAAGAACCTTCGACCAACAAGA
AACGACAATATATTGAACAATCACAACAAAAACCTATCGTGGAGACAGTC
CCTGATTCACCAACACCACGCAACTATAAAGCAGACGCAGAGAGCATTGT
GGGTGATGTGGGCCGCTATGGTTTATGGGAATACACGTCAGATAATACTG
GAATGGGAGACCAAATCAAAGAATTGATGTCCAAAGCAGACAAAATCGAT
GAAACAGGTGGGGCAGCTCATAATTTGGAAAACGAGGCTCACAAGATGAA
CGACGAGATCAATAAATATGCGGAAGCATCTCAATACCCTCAACAATCCA
ACATCGATCCCCTGGAACAACCTGCGGAAATGGATCACGCGTCTCCCGCA
TCGAGTGCCAAGGAAAGCGAAGGAGGATCAGTGGCAGGTCAGAATGGACA
CGAAGATGTGAGCGTTGTGAATATTCCTTCAGCGTTGACCATCGAAGATG
AGCACGGACATCATTTAGACACAGTCAACCCTCAACCAATCAAAGCAGAC
GAATCATCCAAACAAACGTTGCCTAGCAACAAAGAGAAGACAGTTGAACT
GACGATTGAGAAACCATTAGCAACAAACGTGACATCGGGTGATAAAAGAG
AGCAATCAGCTCCCAATGATGAAAAAGGATCCTTCACTCTTCGACTGCTG
AAAGCGATGGAGAAAAGTACAGATTTTCGTAAGAAAGCAGAAGCCTTTCT
ACCTAAACCTTCAGATAACGCTTTGCAATTATACCAAAAAGATAAAGAAT
TGTCAACTTTACTCAAAGAATTCGACAATGCGCAAACAAGCAAAAAGCTC
ACTGAAACAACGGCTGAATCCAAACTACACATCCCTCAATACAAAAAGTC
GGACGGAAAATTGTTGTCCAATATAAAGCTCTTGATACACGATGACTATA
GCTCTCACCAAGAAGAGCAAGACGTTTTGAAAGATTTATTGAAAACAATG
AACGGTGCTGAGAAAGTCGAAGGAAAGATCGAGCATGATTTCACTGATGC
GAGCGCCGGCGGAGGCGGACAAACGCTCTCGGATGGTTATTTGAACCATT
TTAAAGAGTTTTTGGAGAAGCACAGACAAGAGGGGTTTGATCACGAGGAT
AACCATGCACATCAAGCAGCTGACGTCCCACATGGAGATGAAGAATCAAT
TGTGTTTGGTTTTGATTTTTCTGCTGGGAGCGTTTCATTTCATCCAATGC
AAACGACTGATCAGAGAAGACGGACATGCACTTGTGAAATTTCTTGCAAA
GGAAGCTTCATCTTTTAACAAATTCCGTGAATCCAACACCAAAAATCCCA
AACAAGATCTGGAGCGCTTGGAAGCCATGATCGCCAAACAAGAAAGCGTA
GAAGAACCGCTTGACGCTAAGAATGAGAAGTTATTGCAGGAGCAGTTGAA
ACAACTCAACGAGGATAAAAGCCATAGTGAGAAAGCACTGGCCAACCTAA
AGGCGCATAACGGGGATAGTAAAATGAAAGTGGCTACCATTGATGACCAC
CATACAGGCATAATACCAAAGGCTGAGGTGCAGGTTTTCGATAACAGTAT
ATTGAAATATATCCAAACATCAAAACATTTTCAAGATTTCCTCAAAGAAA
AAGGCGTGTTGGCGGGAACACCTACAGCCGCCCAAAAACCTACCGAAGGA
AGTACACGGGAGTTGGATGATCAGTTGTTCGAGCGGCCACTAGCGGAACA
ATTCGAAGAAATTGAATTACAAAAAGAAATCTTGAATTTGAAAGAACGTC
AATTGAGAAATCGTGATCGGAATAAAACCTTGAAAAAGAAAGAGAGTGAA
TCGGTTGCAAAGGCCATGGCTCAAGCAAAAGCGAATCACAAACTATATTT
AACAAACCCTGAACGTGAAAAGATAAGTGACAACAAAGCGGATGAAGAAA
CCGAAAAAGACTTTGAAAAATTGGAACATTTCGCAAAACAGTACAAGAAG
CTGCAGGAAGTAAAAGAACGAGAGAAGCAACGAGAAAAGGAAGAAGTGAA
ATTGAAAGCGAAAAAGGTTGAACAAATAACACCAAATGTAAAAGATGAAG
TGTCGAAAGTCGACGAGGAAACCGCAGGAAGTGGAGAACAGGCTAGTGGG
AGTGGCGTAGAGGAAAATAATGACGTCGTAAGATTAGAGACAGGGGAATC
CCCAAGACAAGAAGAAGTTGAGTCTCTGGCAACAAACAAAGAAAGGGATT
CCCTGGTGACATCAAAGAATGAAGAATTTGCTAAATTATCAGGCGATGGA
GAGATCAAACTGGCCAACACGTCAGCCCCAGTTGAAGAGACTTCAGACGA
TCACGGATTTTCCAAAAGTACAACCGTNAACACGTCAGCCCCAGTTGAAA
AGACTTCAGACGATCACGGATTTTCCAAAAGTATAACCGTAAAACCGGAA
ATCGCTGATGAGTCATCTCGTTTCCATGGCATCAAATTCAAGAATGTCAG
TCTAGTGACAGCCGATCACGAGCAAAGGCTAATGTTACCCATCAACAACC
CAAAACCTGAAGCAGACACCACTCTTACTCCACACGCCGACTTCCACCCT
TCGAAATCACTGCTCAGAGTCATCCGCCCGATGTCTAACGCAACAAGGCG
CCACTACACCCCATCTAGAAGCCACGTCTCTGACGTTACGGCCGCACGGT
TACGTATGAATGCGGAAATAATTTCTCCTGACGATGTAGGTAAATCGGAT
ATTGCAAATGTTAAGCTACACACAGTACCTGTGCGTAAACCGAACGCAAA
TTTCCCGATTCTGGAACCACCCTCACCGCCCACAAGTAAAAGAGGTCAAG
GGATAGAGAACGCCTTAATACACGCTAACACAATCGTGCACCCCATCCAA
TCGCCAATAAGCAACCCTTCAAATCTTCTCAAACATAAAGACATACCAGT
GCCAAAAATAGAGAAGAAAAATATTCGGATGTTCATTCATTCCATCTCAC
CAAAGCATTCACATTTCATACGACCGCATTCAGTCAGCACGCACGATGAG
CGGGCGGTCAAGAAAGGGTTCGGTAAATTACCGCAAAAACCGAAAGAGTA
TTTACTGCGTGAGTTGCAGAAAGACATTAATTTATTGGACAAGAAATCAA
CTACAGTTCAAAACAGTAAACAAAAAAATTCTTTTGACTCAGCAAAGAGA
CTTAGTGTTCCTGTAACAATAAAGAAAGGCCAAACCAAAGCGCAAAGCAT
TCTGGTCCCGTCGTCAATAAAAAAGAACAACATGGTCATTAAACCAAGTA
GTAAATTAACGCGAAATACGAAACGTTCGAACGTGCAAATTGAAGAGGTT
TTTAACTTGTTGAAAAGTGAAGATCAACCTTAAATACTTTGAAATCAGAA
GACGATGAAATCTTAGCTGAATCCTTCCCTCAACAAAAAGAACCTTCGAC
CAACAAGAAACGACAATATATTGAACAATCACAACAAAAACCTATCGTGG
AGACAGTCCCTGATTCACCAACACCACGCAACTATAAAGCAGACGCAGAG
AGCATTGTGGGTGATGTGGGCCGCTATGGTTTATGGGAATACACGTCAGA
TAATACTGGAATGGGAGACCAAATCAAAGAATTGATGTCCAAAGCAGACA
AAATCGATGAAACAGGTGGGGCAGCTCATAATTTGGAAAACGAGGCTCAC
AAGATGAACGACGAGATCAATAAATATGCGGAAGCATCTCAATACCCTCA
ACAATCCAACATCGATCCCCTGGAACAACCTGCGGAAATGGATCACGCGT
CTCCCGCATCGAGTGCCAAGGAAAGCGAAGGAGGATCAGTGGCAGGTCAG
AATGGACACGAAGATGTGAGCGTTGTGAATATTCCTTCAGCGTTGACCAT
CGAAGATGAGCACGGACATCATTTAGACACAGTCAACCCTCAACCAATCA
AAGCAGACGAATCATCCAAACAAACGTTGCCTAGCAACAAAGAGAAGACA
GTTGAACTGACGATTGAGAAACCATTAGCAACAAACGTGACATCGGGTGA
TAAAAGAGAGCAATCAGCTCCCAATGATGAAAAAGGATCCTTCACTCTTC
GACTGCTGAAAGCGATGGAGAAAAGTACAGATTTTCGTAAGAAAGCAGAA
GCCTTTCTACCTAAACCTTCAGATAACGCTTTGCAATTATACCAAAAAGA
TAAAGAATTGTCAACTTTACTCAAAGAATTCGACAATGCGCAAACAAGCA
AAAAGCTCACTGAAACAACGGCTGAATCCAAACTACACATCCCTCAATAC
AAAAAGTCGGACGGAAAATTGTTGTCCAATATAAAGCTCTTGATACACGA
TGACTATAGCTCTCACCAAGAAGAGCAAGACGTTTTGAAAGATTTATTGA
AAACAATGAACGGTGCTGAGAAAGTCGAAGGAAAGATCGAGCATGATTTC
ACTGATGCGAGCGCCGGCGGAGGCGGACAAACGCTCTCGGATGGTTATTT
GAACCATTTTAAAGAGTTTTTGGAGAAGCACAGACAAGAGGGGTTTGATC
ACGAGGATAACCATGCACATCAAGCAGCTGACGTCCCACATGGAGATGAA
GAATCAATTGTGTTTGGTTTTGATTTTTCTGCTGGGAGCGTTTCATTTCA
TCCAATGCAAACGACTGATCAGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_042094XLOC_042094Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00067376-proteinTCONS_00067376-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00067376-exon-scaffold_469-1575043694:221559..221804TCONS_00067376-exon-scaffold_469-1575043694:221559..221804Clytia hemisphaericaexon
TCONS_00067376-exon-scaffold_469-1575043694:219263..220474TCONS_00067376-exon-scaffold_469-1575043694:219263..220474Clytia hemisphaericaexon
TCONS_00067376-exon-scaffold_469-1575043694:216622..218979TCONS_00067376-exon-scaffold_469-1575043694:216622..218979Clytia hemisphaericaexon
TCONS_00067376-exon-scaffold_469-1510915933:221559..221804TCONS_00067376-exon-scaffold_469-1510915933:221559..221804Clytia hemisphaericaexon
TCONS_00067376-exon-scaffold_469-1510915933:219263..220474TCONS_00067376-exon-scaffold_469-1510915933:219263..220474Clytia hemisphaericaexon
TCONS_00067376-exon-scaffold_469-1510915933:216622..218979TCONS_00067376-exon-scaffold_469-1510915933:216622..218979Clytia hemisphaericaexon
TCONS_00067376-exon-scaffold_469-1491911889:221559..221804TCONS_00067376-exon-scaffold_469-1491911889:221559..221804Clytia hemisphaericaexon
TCONS_00067376-exon-scaffold_469-1491911889:219263..220474TCONS_00067376-exon-scaffold_469-1491911889:219263..220474Clytia hemisphaericaexon
TCONS_00067376-exon-scaffold_469-1491911889:216622..218979TCONS_00067376-exon-scaffold_469-1491911889:216622..218979Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_469supercontigscaffold_469:216622..221804 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.218167 0.183159 0.39248 0.403131 0.0823945 0.0542577 3.11931 4.13117 1.10002 0.858466 2.44192 2.69475 7.88495 6.99045 3.65686 11.9957 4.28364 3.97371 0.0419641 0.132339 2.58021 2.50482 1.36589 1.60645 2.72455 5.34385 0.525987 0.172722 0.0552823 0.0560864
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00067376 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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