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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00067370 ID=TCONS_00067370|Name=TCONS_00067370|organism=Clytia hemisphaerica|type=transcript|length=799bp
gcaaaaataaaagattaaGAAAATAGAACTAAATAAATGAAGAGAATGAG
ATGAGTACACCATTGTACATCCTCCAAAGCGAGTATTGGGTTCGCATCAA
CCTTGCTTTGGAGTATTGCATCAAAGGAGCGCTCATTGATGTACTTCACA
ACGCGCACAATGACACTTCTTATACTGGACTTCCAACTTGTCCAAAACAA
CTTCATCAAATATTCGTGCAATGCAAACAAAACAAGAAACACGAGTTGGA
CAAAGTGTTGAAGAAAGAATAATGGGAAATATTGTGTCCACAAAATGGAT
CATCCAACCCAGAAGATTGGGATATCACCTTATTGATTGCTGTATTGAGG
TCAGTGGTTGGATTGCAACCTGCTGGAGGATGGAAAATCAAATCTCTTCA
ACCCAACGATCAATCTATTGGAGCTTTCTTGTTTTTGATCAGAAATTTAA
GAAATGAATTAATGCATGGTTCAATCAATGCAGTACCAGATTTACAAGCT
TTCAAACAACTGAGAGCTCGAATGGAGAACATTTTACTGGGATTGAAATA
TAAGGATATGCAAATGTTTTATGATTTGGAAAGTTGTCCATTGGATAAAC
ATGTGTTGGTTATTTCTCGAATGGTCACCAATTTGGACCAAGAAGTGGAT
TTGTTGCGAAATGAAGCGAGCGATAATTCGAATGCTATCAAAAATATCGA
ACAAACTAATCAATGGATCAAAACTTATTTGAAACAATTATCTTCGGCAA
AAGCTGACAAAACTGACGTCGAAGAATTGAGCAACAAAGTTGACCAGCT Run BLAST on NCBI transcript from alignment at scaffold_469:553479..555247+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00067370 ID=TCONS_00067370|Name=TCONS_00067370|organism=Clytia hemisphaerica|type=transcript|length=1769bp|location=Sequence derived from alignment at scaffold_469:553479..555247+ (Clytia hemisphaerica)
gcaaaaataaaagattaaGAAAATAGAACTAAATAAATGAAGAGAATGAG
ATGAGTACACCATTGTACATCCTCCAAAGCGAGTATTGGGTTCGCATCAA
CCTTGCTTTGGAGTATTGCATCAAAGGAGCGCTCATTGATGTACTTCACA
ACGCGCACAATGACACTTCTTATACTGGACTTCCAACTTGTCCAAAACAA
CTTCATCAAATATTCGTGCAATGCAAACAAAACAAGAAACACGAGTTGGA
CAAAGTGTTGAAGAAAGAATAATGGGAAATATTGTGTCCACAAAATGGAT
CATCCAACCCAGAAGATTGGGATATCACCTTATTGATTGCTGTATTGAGG
TCAGTGGTTGGATTGCAACCTGCTGGAGGATGGAAAATCAAATCTCTTCA
ACCCAACGATCAATCTATTGGAGCTTTCTTGTTTTTGATCAGAAATTTAA
GAAATGAATTAATGCATGGTTCAATCAATGCAGTACCAGATTTACAAGCT
TTCAAACAACTGAGAGCTCGAATGGAGAACATTTTACTGGGATTGAAATA
TAAGGATATGCAAATGTTTTATGATTTGGAAAGTTGTCCATTGGATAAAC
ATGTGTTGGTTATTTCTCGAATGGTCACCAATTTGGACCAAGAAGTGGAT
TTGTTGCGAAATGAAGCGAGCGATAATTCGAATGCTATCAAAAATATCGA
ACAAACTAATCAATGGATCAAAACTTATTTGAAACAATTATCTTCGGCAA
AAGCTGACAAAACTGACGTCGAAGGTGAGATACATTGGTTTTCAATGTCA
TCGAAAGCACATTTACTTTCTTACCTCTTTTGAATTTATGACATCCTAAG
AGATGAATCTTGTTAACTTTTTACCTGTTGACACTGAATCTGTTGTCATT
GAATATCACTATTTGTTTTACTCTAGATTTAGCCAAGTCAATGAATATGA
AAGCTGACAAAGATAAAATGGatggtatgtttttttttttggttaatact
ttttcaaaaaagaataaaaagtgaTCAAATCCCAAGAAGCTTTGCCTTGG
ATGGTTGTGTAAGAGAAATTAGGAGGCTTCATCACTCCACACCCTTCTGA
AGTAGAACTGAtctttataaaaactttgacGTCAATCAAAAAAGCTGACA
TGttgattttcattattttttatctagaatTGTCCACAGTGATGGATTCG
AAATTGACGTTAAAGGCTGACAAATGCCAATTTGATGGTAAAGTTATACC
AGAAAAGTTTGTTGTGTTTTgtcgaatgtttttttctccttttttgagGT
GGTCCGCTAGcaacttttttcatcaaaatacaacTTTGGCATAATTCAGA
TTTCAAATGTATCTAGtcgatgaaaaatgtttcaaatgttCCGAGATCTT
TAATTTCCTCTGTAATCTACacgaattttggtttttattcttttaaaggA
AGTTCCAGAATAAAAAGGCCTTTTCTGACGAGTATCATTTTTTTTAACAG
AATTGAGCAACAAAGTTGACCAGCTATCAATTGAATCAAAATCTGTAAAG
GGTAAAACTTGagctatgattttttttttgctatccatgccttattatta
tttttattcttttaatcGAATGTTGCTGAATAAAAAggctttttctgata
aatatcAATTATTTTAACAGAATTGAGCAACAAAGTTGACCAGCTATCAA
TGGAATCAAAATCTGTAANCTGACGAGTATCATTTTTTTAACAGAATTGA
GCAACAAAGTTGACCAGCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00067370-exon-scaffold_469-1491911889:553479..554252 | TCONS_00067370-exon-scaffold_469-1491911889:553479..554252 | Clytia hemisphaerica | exon |
| TCONS_00067370-exon-scaffold_469-1510915933:553479..554252 | TCONS_00067370-exon-scaffold_469-1510915933:553479..554252 | Clytia hemisphaerica | exon |
| TCONS_00067370-exon-scaffold_469-1575043694:553479..554252 | TCONS_00067370-exon-scaffold_469-1575043694:553479..554252 | Clytia hemisphaerica | exon |
| TCONS_00067370-exon-scaffold_469-1491911889:555223..555247 | TCONS_00067370-exon-scaffold_469-1491911889:555223..555247 | Clytia hemisphaerica | exon |
| TCONS_00067370-exon-scaffold_469-1510915933:555223..555247 | TCONS_00067370-exon-scaffold_469-1510915933:555223..555247 | Clytia hemisphaerica | exon |
| TCONS_00067370-exon-scaffold_469-1575043694:555223..555247 | TCONS_00067370-exon-scaffold_469-1575043694:555223..555247 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_469 | supercontig | scaffold_469:553479..555247 + |
Blast
The following BLAST results are available for this feature:
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