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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00067327 ID=TCONS_00067327|Name=TCONS_00067327|organism=Clytia hemisphaerica|type=transcript|length=484bp
CTTTCTTCTTTCCTGTTGTCAGTTCAACAGCTTTTGCATACCGTGGCAAG
AAGACCATCACCACCATCGATCCTTCCAAACAAAGCATCATTGATACCTA
CAATCGCATCAGTGGCTTCAGTGACGTAGATGTTCGGCAAATCGACCTTA
TGTACAAAGATGAATGCGCTAAAAGAGGAAATGGTGGAAATGGTGGAAAC
GGTTCATGCACCGACAAGGATAGAAGTTGTCCGGGATGGAAAAGCTATTG
CGGAAAGAACCAACACGTAGACACAAACTGCAAGAAAACATGCGGAACAT
GCCCCGGAACGGGTGGTGGTGGCAGTGGATGCCAAGACAAACACACAGGA
TGTGCAAGCTACAAGCGATCGGGATATTGTACTCGTCAACATGTCCAATG
GATGAAAGAGAATTGCTGTAAAACTTGTGGTTTTTAAGGAAatatatgtt
tttaaaattgaatctAATTTTGTGAATTCCAATT Run BLAST on NCBI transcript from alignment at scaffold_469:97588..98889+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00067327 ID=TCONS_00067327|Name=TCONS_00067327|organism=Clytia hemisphaerica|type=transcript|length=1302bp|location=Sequence derived from alignment at scaffold_469:97588..98889+ (Clytia hemisphaerica)
CTTTCTTCTTTCCTGTTGTCAGTTCAACAGCTTTTGCATACCGTGGCAAG
AAGACCATCACCACCATCGATCCTTCCAAACAAAGCATCATTGATACCTA
CAATCGCATCAGTGGCTTCAGTGACGTAGATGTTCGGCAAATCGACCTTA
TGTACAAAGATGAATGCGCTAAAAGAGGTTCCTTTACTTTACATTTAATC
TTCCGGTTCACTTTTCCCCTGATGTCGCCCCTTCACCCGCTCAAATAAGC
TCGATCGTCAAATACGATTCAAATTCTCAAAGAAAAAACGACTGTTTTCA
CACCATAACGAACTAAAAGATGAGTTGGTATTCATAGTATGCACCATTGC
GCAATGTCTTCCATGGACCCAACCGCTGATTGGTTGCTAGTGACGCATTG
ACTgactttacgtcacttacaaccaaccgtgatgtaatgtcagaagacgt
tgcaatggtgcatattatgaatagGCTAAATCTGTCCATTTTTCTAATAC
TcatgataaaaaattgtttttatttcttttctcaGGAAATGGTGGAAATG
GTGGAAACGGTGGAAATGGTGGTAAGTATTTTTTTGTATCATTCacaaaa
aagctttttatcATAATTGctttcatcatcatccttcggtCTAGGTCTGT
AAAGATCTAGGTCGGAAACATACAATAACCCTCCCGCCACAGCTACCGGT
CGACCATTGCTGTCTCCAATTCTCCTAACTCAAGTCCTGCTGTTGTTGCT
TTAGATAATTTAATAATTACTTCATCTCTCCCTACACATTTCCATATACC
TATTCATTGATTGTTTCTCTCTTTTGATTCCAGGAAATGGCGGAAATGGT
gagtttttattttctcttaaagataaaaaaagagcGGGTCGATAAGTTTA
CGAACTGACTTTTGTGCTTgcttgataatttttgaacatagcgaactttt
tttggaattctTTTGCTTTTTGGTTACTAAATCttttaaatccaaaaaat
tttgaCCTCTTCTTAAAAGGTTCATGCACCGACAAGGATAGAAGTTGTCC
GGGATGGAAAAGCTATTGCGGAAAGAACCAACACGTAGACACAAACTGCA
AGAAAACATGCGGAACATGCCCCGGAACGGGTGGTGGTGGCAGTGGATGC
CAAGACAAACACACAGGATGTGCAAGCTACAAGCGATCGGGATATTGTAC
TCGTCAACATGTCCAATGGATGAAAGAGAATTGCTGTAAAACTTGTGGTT
TTTAAGGAAatatatgtttttaaaattgaatctAATTTTGTGAATTCCAA
TT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00067327-exon-scaffold_469-1491911889:97588..97764 | TCONS_00067327-exon-scaffold_469-1491911889:97588..97764 | Clytia hemisphaerica | exon |
| TCONS_00067327-exon-scaffold_469-1510915933:97588..97764 | TCONS_00067327-exon-scaffold_469-1510915933:97588..97764 | Clytia hemisphaerica | exon |
| TCONS_00067327-exon-scaffold_469-1575043694:97588..97764 | TCONS_00067327-exon-scaffold_469-1575043694:97588..97764 | Clytia hemisphaerica | exon |
| TCONS_00067327-exon-scaffold_469-1491911889:98123..98146 | TCONS_00067327-exon-scaffold_469-1491911889:98123..98146 | Clytia hemisphaerica | exon |
| TCONS_00067327-exon-scaffold_469-1510915933:98123..98146 | TCONS_00067327-exon-scaffold_469-1510915933:98123..98146 | Clytia hemisphaerica | exon |
| TCONS_00067327-exon-scaffold_469-1575043694:98123..98146 | TCONS_00067327-exon-scaffold_469-1575043694:98123..98146 | Clytia hemisphaerica | exon |
| TCONS_00067327-exon-scaffold_469-1491911889:98607..98889 | TCONS_00067327-exon-scaffold_469-1491911889:98607..98889 | Clytia hemisphaerica | exon |
| TCONS_00067327-exon-scaffold_469-1510915933:98607..98889 | TCONS_00067327-exon-scaffold_469-1510915933:98607..98889 | Clytia hemisphaerica | exon |
| TCONS_00067327-exon-scaffold_469-1575043694:98607..98889 | TCONS_00067327-exon-scaffold_469-1575043694:98607..98889 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_469 | supercontig | scaffold_469:97588..98889 + |
Blast
The following BLAST results are available for this feature:
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