TCONS_00067298 (transcript) - C. hemisphaerica

Overview
NameTCONS_00067298
Unique NameTCONS_00067298
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length196

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00067298 ID=TCONS_00067298|Name=TCONS_00067298|organism=Clytia hemisphaerica|type=transcript|length=196bp
AAAATTTCTCCTCAAATGAATACAAGAAGGCCCTTAGTATTGAGGCGTGT
TTAAGTGCAAACAATACAGGGAAGAACGCAGACATAAAACAACGGGCTGA
ACTGTTGGATCAATTAATCCAACAAGTAGTGAAACCTTTGTGCTCAATTG
CAGCACAAAACAACAACACAACACAATGCAAGCCAACAAACCAATT
Run BLAST on NCBI

transcript from alignment at scaffold_468:41284..41479

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00067298 ID=TCONS_00067298|Name=TCONS_00067298|organism=Clytia hemisphaerica|type=transcript|length=196bp|location=Sequence derived from alignment at scaffold_468:41284..41479 (Clytia hemisphaerica)
AATTGGTTTGTTGGCTTGCATTGTGTTGTGTTGTTGTTTTGTGCTGCAAT
TGAGCACAAAGGTTTCACTACTTGTTGGATTAATTGATCCAACAGTTCAG
CCCGTTGTTTTATGTCTGCGTTCTTCCCTGTATTGTTTGCACTTAAACAC
GCCTCAATACTAAGGGCCTTCTTGTATTCATTTGAGGAGAAATTTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_042053XLOC_042053Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00067298-exon-scaffold_468-1491911889:41284..41479TCONS_00067298-exon-scaffold_468-1491911889:41284..41479Clytia hemisphaericaexon
TCONS_00067298-exon-scaffold_468-1510915933:41284..41479TCONS_00067298-exon-scaffold_468-1510915933:41284..41479Clytia hemisphaericaexon
TCONS_00067298-exon-scaffold_468-1575043694:41284..41479TCONS_00067298-exon-scaffold_468-1575043694:41284..41479Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_468supercontigscaffold_468:41284..41479 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00067298 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top