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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00067295 ID=TCONS_00067295|Name=TCONS_00067295|organism=Clytia hemisphaerica|type=transcript|length=783bp
ctttttcaaaaacgcTCTCCGCTCTTCCGCTTTTCCACTCTTTTGATCAC
CATGGTTGTATGTTGTCAGTTTGGACAATTCATAAAGCAGGCTGTAAGTT
CTAGATTAAGTTGCTTTCTGGAAACCCCCATGTGTACTACCTTCCTCTTC
TACTGCTTTTTCCCACTCTATTAAAGCATTTTCAGCATAAACCCCAAGAT
TATGTATAATATGCAGACCACAAAACAAGTGATAAATAGTTGAAACATCT
TTTTTCTCTTCTTCAGGTAGGAGGTTGTAGTTTCCAATAACTTCTGGTAA
GATGCCTTCCCTATACCtctgaaatttttgatgaaaagttAAGTTTCCAA
TTGTTCTATCCGTCATCAATACTTTAATAGAGTGAATCAGTTTATTCTTT
ACAGATTCTGCGTTTGTTGATGGAAATGTCTCTGACATCAGGGTCAGGAT
AGCCTTAGTTTCCTCTAAATAAGATTGTGCCTCCCCGCTATGCATGTCTG
CAATTCCTAATGTGAGGGTGCCTGAATCAGTAGAAACATGATAGCTTCCA
ACTTCTTTGAACTTGTACTTAGTACCATCTGTATGTAAAACATTGTGAGA
ACTGTTCAGCATTACCTCGGCACCTTGTGAGCTAGATACCAAATTCATTT
CAGCTAAAAATTCAGCAACTAAAGACTTACAAGGCAACCTATAACATTTA
ATTCCAGCAAGTTGATCTAACACAGCCTCGATCGCAGGAGAAACACTTTC
CACGGCGATATTCATTTTGAGTAATTGGTAACA Run BLAST on NCBI protein sequence of TCONS_00067295-protein >TCONS_00067295-protein ID=TCONS_00067295-protein|Name=TCONS_00067295-protein|organism=Clytia hemisphaerica|type=polypeptide|length=225bp
CYQLLKMNIAVESVSPAIEAVLDQLAGIKCYRLPCKSLVAEFLAEMNLVS
SSQGAEVMLNSSHNVLHTDGTKYKFKEVGSYHVSTDSGTLTLGIADMHSG
EAQSYLEETKAILTLMSETFPSTNAESVKNKLIHSIKVLMTDRTIGNLTF
HQKFQRYREGILPEVIGNYNLLPEEEKKDVSTIYHLFCGLHIIHNLGVYA
ENALIEWEKAVEEEGSTHGGFQKAT Run BLAST on NCBI transcript from alignment at scaffold_468:31881..32663 Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00067295 ID=TCONS_00067295|Name=TCONS_00067295|organism=Clytia hemisphaerica|type=transcript|length=783bp|location=Sequence derived from alignment at scaffold_468:31881..32663 (Clytia hemisphaerica)
TGTTACCAATTACTCAAAATGAATATCGCCGTGGAAAGTGTTTCTCCTGC
GATCGAGGCTGTGTTAGATCAACTTGCTGGAATTAAATGTTATAGGTTGC
CTTGTAAGTCTTTAGTTGCTGAATTTTTAGCTGAAATGAATTTGGTATCT
AGCTCACAAGGTGCCGAGGTAATGCTGAACAGTTCTCACAATGTTTTACA
TACAGATGGTACTAAGTACAAGTTCAAAGAAGTTGGAAGCTATCATGTTT
CTACTGATTCAGGCACCCTCACATTAGGAATTGCAGACATGCATAGCGGG
GAGGCACAATCTTATTTAGAGGAAACTAAGGCTATCCTGACCCTGATGTC
AGAGACATTTCCATCAACAAACGCAGAATCTGTAAAGAATAAACTGATTC
ACTCTATTAAAGTATTGATGACGGATAGAACAATTGGAAACTTaactttt
catcaaaaatttcagaGGTATAGGGAAGGCATCTTACCAGAAGTTATTGG
AAACTACAACCTCCTACCTGAAGAAGAGAAAAAAGATGTTTCAACTATTT
ATCACTTGTTTTGTGGTCTGCATATTATACATAATCTTGGGGTTTATGCT
GAAAATGCTTTAATAGAGTGGGAAAAAGCAGTAGAAGAGGAAGGTAGTAC
ACATGGGGGTTTCCAGAAAGCAACTTAATCTAGAACTTACAGCCTGCTTT
ATGAATTGTCCAAACTGACAACATACAACCATGGTGATCAAAAGAGTGGA
AAAGCGGAAGAGCGGAGAgcgtttttgaaaaag Coding sequence (CDS) from alignment at scaffold_468:31881..32663 >TCONS_00067295 ID=TCONS_00067295|Name=TCONS_00067295|organism=Clytia hemisphaerica|type=CDS|length=678bp|location=Sequence derived from alignment at scaffold_468:31881..32663 (Clytia hemisphaerica)
TGTTACCAATTACTCAAAATGAATATCGCCGTGGAAAGTGTTTCTCCTGC
GATCGAGGCTGTGTTAGATCAACTTGCTGGAATTAAATGTTATAGGTTGC
CTTGTAAGTCTTTAGTTGCTGAATTTTTAGCTGAAATGAATTTGGTATCT
AGCTCACAAGGTGCCGAGGTAATGCTGAACAGTTCTCACAATGTTTTACA
TACAGATGGTACTAAGTACAAGTTCAAAGAAGTTGGAAGCTATCATGTTT
CTACTGATTCAGGCACCCTCACATTAGGAATTGCAGACATGCATAGCGGG
GAGGCACAATCTTATTTAGAGGAAACTAAGGCTATCCTGACCCTGATGTC
AGAGACATTTCCATCAACAAACGCAGAATCTGTAAAGAATAAACTGATTC
ACTCTATTAAAGTATTGATGACGGATAGAACAATTGGAAACTTaactttt
catcaaaaatttcagaGGTATAGGGAAGGCATCTTACCAGAAGTTATTGG
AAACTACAACCTCCTACCTGAAGAAGAGAAAAAAGATGTTTCAACTATTT
ATCACTTGTTTTGTGGTCTGCATATTATACATAATCTTGGGGTTTATGCT
GAAAATGCTTTAATAGAGTGGGAAAAAGCAGTAGAAGAGGAAGGTAGTAC
ACATGGGGGTTTCCAGAAAGCAACTTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00067295-exon-scaffold_468-1491911889:31881..32663 | TCONS_00067295-exon-scaffold_468-1491911889:31881..32663 | Clytia hemisphaerica | exon |
| TCONS_00067295-exon-scaffold_468-1510915933:31881..32663 | TCONS_00067295-exon-scaffold_468-1510915933:31881..32663 | Clytia hemisphaerica | exon |
| TCONS_00067295-exon-scaffold_468-1575043694:31881..32663 | TCONS_00067295-exon-scaffold_468-1575043694:31881..32663 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_468 | supercontig | scaffold_468:31881..32663 . |
Blast
The following BLAST results are available for this feature:
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