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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00067271 ID=TCONS_00067271|Name=TCONS_00067271|organism=Clytia hemisphaerica|type=transcript|length=1104bp
GTTTAATATTCTGTCCATTTAAAAATTCTGAGTCTGTTTAATCATCTTTT
AGTCTGttcatttatttttcagaaaataaattaTCAGTTAATTATATAga
caaattttgaaacttgTATGGCTGTCATAAAGTATTTAGTTGTCTTGCAG
TTGATTCACTGGCAGTCGGCACCCTGTAACACAGAAAAAGATTTGATCAC
AAGTTAAAGGTATATAGTTAATATTTTTAGTATTCAGTCCCCTATGCTTA
TCTGACTTTCAAAGTTTCAACAGTTaggtttatcaagagttataaACTGT
TATATGGCACTTTTGATCTCTCAGTAGGTAATTTCAAAGGTACCCCTGAA
AAATTCGACCTAAAGTGCATTCTAGGTGGGAAATTGTCAAAATCctttaa
aatcgcataaattatGCATATTTTTGCACTTTTGTATAAATTATCTGCAG
TTTTTCACTGTAACAAATTTTTTGACTCCTCCTTAGGACATTTCAAAGGT
GCCctgaaAATTTTGAACAAAAGCGCATGCTAGATCAGAAGATATGGCTT
ATTTTCCCTTAAATCGCATAAATTATGCATTTTTTGCCAATTTGCGCAAT
GTATAAATGGTTTTTTCGCAGTTATTGCATTTCTGCTACCTCAGTAGGTA
ATTTCAAAGGTGCCCTGAAAAATTCTGCCTAAAGCACATGCTAGATGGGA
TGTTGTCTAGTATTTTTCCTTTAAATCCTTCAAAATCGCATAAATTATGC
ATATTTTTGCACTTTACAGTTTTTCActgtttcaactttttttatcactc
cttaagttatttcaaaagttctctgaaaaatttgaacagAAACGCATGAT
AGATCGAAAGATATGACTTATTTTCCTCTAAATCGGATAAATTATGCATG
TTTTTAGCAATTCCTTATCAAAGCATTCTTTAGAATATGTCCAAAACTGA
TATATATCGTAGTTTGTCTGATAAACTCGTGGAACGGTAATGTGTGGCAC
ATTTTTGGCTTGTCAGGGAGGCTTTTTATCCttgaaaacttattttttcc
taATAATTAGCCTAATTTATGCAGCATTTCGCATAATTATGACAAACAGA
ATGC Run BLAST on NCBI transcript from alignment at scaffold_468:42433..43869+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00067271 ID=TCONS_00067271|Name=TCONS_00067271|organism=Clytia hemisphaerica|type=transcript|length=1437bp|location=Sequence derived from alignment at scaffold_468:42433..43869+ (Clytia hemisphaerica)
GTTTAATATTCTGTCCATTTAAAAATTCTGAGTCTGTTTAATCATCTTTT
AGTCTGttcatttatttttcagaaaataaattaTCAGTTAATTATATAga
caaattttgaaacttgTATGGCTGTCATAAAGTATTTAGTTGTCTTGCAG
TTGATTCACTGGCAGTCGGCACCCTGTAACACAGAAAAAGATTTGATCAC
AAGTTAAAGGTATATAGTTAATATTTTTAGTATTCAGTCCCCTATGCTTA
TCTGACTTTCAAAGTTTCAACAGTTaggtttatcaagagttataaACTGT
TATATGGCACTTTTGATCTCTCAGTAGGTAATTTCAAAGGTACCCCTGAA
AAATTCGACCTAAAGTGCATTCTAGGTGGGAAATTGTCAAAATCctttaa
aatcgcataaattatGCATATTTTTGCACTTTTGTATAAATTATCTGCAG
TTTTTCACTGTAACAAATTTTTTGACTCCTCCTTAGGACATTTCAAAGGT
GCCctgaaatttttgaacaaaagcgCATGCTAGATCAGAAGAAATGGCTT
ATTTTCCCTTAAATCGCATAAATTATGCATTTTTTGCCAATTTGCGCAAT
GTATAAATGGTTTCTTCACTGTTATTGCATTTCTGCTCCCTCAGTAGTTA
ATTTCAAAGATGCCCTGAAAAATTCTGCCTAAAGCGCATGTTAAATGGGA
AGTTGTcttgtatttttctcaaaatcctttaaaatcgcataaattatGCA
TTTTTTTGCACTTATTTATAAATTATCTGCAGTTTTTCACTGTAACAACA
TTTTTGACCCCTCCTTAGGACTTTTCATAGGTGCCCAGGACAATTTTGAA
CAAAAGCGCATGCTAGATCAGAAGATATGGCTTATTTTCCCTTAAATCGC
ATAAATTATGCATTTTTTGCCAATTTGCGCAATGTATAAATGGTTTTTTC
GCAGTTATTGCATTTCTGCTACCTCAGTAGGTAATTTCAAAGGTGCCCTG
AAAAATTCTGCCTAAAGCACATGCTAGATGGGATGTTGTCTAGTATTTTT
CCTTTAAATCCTTCAAAATCGCATAAATTATGCATATTTTTGCACTTTAC
AGTTTTTCActgtttcaactttttttatcactccttaagttatttcaaaa
gttctctgaaaaatttgaacagAAACGCATGATAGATCGAAAGATATGAC
TTATTTTCCTCTAAATCGGATAAATTATGCATGTTTTTAGCAATTCCTTA
TCAAAGCATTCTTTAGAATATGTCCAAAACTGATATATATCGTAGTTTGT
CTGATAAACTCGTGGAACGGTAATGTGTGGCACATTTTTGGCTTGTCAGG
GAGGCTTTTTATCCttgaaaacttattttttcctaATAATTAGCCTAATT
TATGCAGCATTTCGCATAATTATGACAAACAGAATGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00067271-exon-scaffold_468-1491911889:42433..42940 | TCONS_00067271-exon-scaffold_468-1491911889:42433..42940 | Clytia hemisphaerica | exon |
| TCONS_00067271-exon-scaffold_468-1510915933:42433..42940 | TCONS_00067271-exon-scaffold_468-1510915933:42433..42940 | Clytia hemisphaerica | exon |
| TCONS_00067271-exon-scaffold_468-1575043694:42433..42940 | TCONS_00067271-exon-scaffold_468-1575043694:42433..42940 | Clytia hemisphaerica | exon |
| TCONS_00067271-exon-scaffold_468-1491911889:43274..43869 | TCONS_00067271-exon-scaffold_468-1491911889:43274..43869 | Clytia hemisphaerica | exon |
| TCONS_00067271-exon-scaffold_468-1510915933:43274..43869 | TCONS_00067271-exon-scaffold_468-1510915933:43274..43869 | Clytia hemisphaerica | exon |
| TCONS_00067271-exon-scaffold_468-1575043694:43274..43869 | TCONS_00067271-exon-scaffold_468-1575043694:43274..43869 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_468 | supercontig | scaffold_468:42433..43869 + |
Blast
The following BLAST results are available for this feature:
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