TCONS_00067259 (transcript) - C. hemisphaerica

Overview
NameTCONS_00067259
Unique NameTCONS_00067259
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length225

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00067259 ID=TCONS_00067259|Name=TCONS_00067259|organism=Clytia hemisphaerica|type=transcript|length=225bp
NGGGCGTTTGAAGGTTGGGAGGGCGGAATAGAGAGCGCCTCTGGCAGCCA
TATTGGATTTGActtatcgagacaaaatgtggATGGTTCGATCGGAAGCA
AGCGTAACTTGGAATTTTTCTCTGGAAACTCTGGAAACTACAAGAGTCTA
TTTTAGGTTGTTGATCATCTGGAACTGGGTAACATAAGTCTATTCGTCGC
CAATGTAGTACCCACTTAGTCGAAG
Run BLAST on NCBI

transcript from alignment at scaffold_466:339784..340008

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00067259 ID=TCONS_00067259|Name=TCONS_00067259|organism=Clytia hemisphaerica|type=transcript|length=225bp|location=Sequence derived from alignment at scaffold_466:339784..340008 (Clytia hemisphaerica)
CTTCGACTAAGTGGGTACTACATTGGCGACGAATAGACTTATGTTACCCA
GTTCCAGATGATCAACAACCTAAAATAGACTCTTGTAGTTTCCAGAGTTT
CCAGAGAAAAATTCCAAGTTACGCTTGCTTCCGATCGAACCATccacatt
ttgtctcgataagTCAAATCCAATATGGCTGCCAGAGGCGCTCTCTATTC
CGCCCTCCCAACCTTCAAACGCCCN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_042018XLOC_042018Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00067259-exon-scaffold_466-1491911889:339784..340008TCONS_00067259-exon-scaffold_466-1491911889:339784..340008Clytia hemisphaericaexon
TCONS_00067259-exon-scaffold_466-1510915933:339784..340008TCONS_00067259-exon-scaffold_466-1510915933:339784..340008Clytia hemisphaericaexon
TCONS_00067259-exon-scaffold_466-1575043694:339784..340008TCONS_00067259-exon-scaffold_466-1575043694:339784..340008Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_466supercontigscaffold_466:339784..340008 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
6.86237	2.23063	5.17995	2.53389	3.08476	3.65643	7.35222	2.75322	1.9276	1.19382	9.27001	2.28515	2.28197	5.52966	1.94834	2.09087	0.858593	4.40015	7.29486	6.36128	4.42329	6.47258	1.31138	2.38446	6.13986	2.19187	3.13656	0	7.6167	2.58674
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00067259 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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