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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00067249 ID=TCONS_00067249|Name=TCONS_00067249|organism=Clytia hemisphaerica|type=transcript|length=1056bp
tattctttggTTGGTTCGAGTCAAGCCACGTTACCTTGGTCCAGACCGCT
GCTTGCACGTCGGGACAACTGCTTCGACTCTTGGATCAAAGGAGATCTGG
TTGTTGGATCAACGATGATATCTGGTGTTTGGATCAACGGAGATTGCTGG
CTGGTGGATCGAGGGGATTGCTGGCTGGTGGATCGAGAGGATTGCTGGCT
GGTGGATTGAGGTGATTGCTGGTTTGGTCAACGGAGATTGGTTGGATTTG
AGTCAAGCCACGCTACCTTGGTACAGACCGCTACTTGCACGTCGGTACAA
CTGCTTTGACTCTATCTGCAAAGACTTCGATTGCAACAGTAAGACTCTAT
CTACATCCAAATTCCTTTGAAGTCTGCTTCAAGTTTTGCGACTGAGGAAA
ACCTGGTGTGTCCAGTTCGAGTCAAGCCACGCTACCTTGGTACAGACCGC
TGCTTACACGTCGGTACAACTGCTTCGACTCTATCTGCAAAGACTTCGAT
TGCAACAGTAAGACTCTATCTGCATCCGAATTCCTTTGAAATCTGCTTCA
AGTTTTGCGATTGAGGACAACCTGGTGTTTTCAGTTTGAGTCAAGCCACG
CTACCTTGGTACAGACCGCTGCTTGCACGTCGGTACAACTGCTTCGACTC
TAACTGCAaaaactcaactgcttcgacgctgtctatcaaacgtcacgtcg
tcaacctcaactgagcttcgttggtaaggctctgttcacactttaacttt
gttttgtgaagtTTTCAACTtatctgcttcgacgctgtctatccacgtca
cgtcgtcaacctcaactgagcttcattggtaaggctcttttcacacttta
actttgttttgtgaagtgttcaactcatctgcttcgacgctgtctgtcaa
acgtcacgtcgtcaactcaactgcttcgacgttGTCTATCAAAAGTCTCG
TCGTCAATTCAACTGAGCTTCGTTGGTAAGGCtctgttcacactttcaac
tttgttttgtgaagtgttcaactcatctgcttcgacgctgtctatcaaaa
gtcacg Run BLAST on NCBI transcript from alignment at scaffold_466:46122..47177 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00067249 ID=TCONS_00067249|Name=TCONS_00067249|organism=Clytia hemisphaerica|type=transcript|length=1056bp|location=Sequence derived from alignment at scaffold_466:46122..47177 (Clytia hemisphaerica)
cgtgacttttgatagacagcgtcgaagcagatgagttgaacacttcacaa
aacaaagttgaaagtgtgaacagaGCCTTACCAACGAAGCTCAGTTGAAT
TGACGACGAGACTTTTGATAGACaacgtcgaagcagttgagttgacgacg
tgacgtttgacagacagcgtcgaagcagatgagttgaacacttcacaaaa
caaagttaaagtgtgaaaagagccttaccaatgaagctcagttgaggttg
acgacgtgacgtggatagacagcgtcgaagcagataAGTTGAAAacttca
caaaacaaagttaaagtgtgaacagagccttaccaacgaagctcagttga
ggttgacgacgtgacgtttgatagacagcgtcgaagcagttgagttttTG
CAGTTAGAGTCGAAGCAGTTGTACCGACGTGCAAGCAGCGGTCTGTACCA
AGGTAGCGTGGCTTGACTCAAACTGAAAACACCAGGTTGTCCTCAATCGC
AAAACTTGAAGCAGATTTCAAAGGAATTCGGATGCAGATAGAGTCTTACT
GTTGCAATCGAAGTCTTTGCAGATAGAGTCGAAGCAGTTGTACCGACGTG
TAAGCAGCGGTCTGTACCAAGGTAGCGTGGCTTGACTCGAACTGGACACA
CCAGGTTTTCCTCAGTCGCAAAACTTGAAGCAGACTTCAAAGGAATTTGG
ATGTAGATAGAGTCTTACTGTTGCAATCGAAGTCTTTGCAGATAGAGTCA
AAGCAGTTGTACCGACGTGCAAGTAGCGGTCTGTACCAAGGTAGCGTGGC
TTGACTCAAATCCAACCAATCTCCGTTGACCAAACCAGCAATCACCTCAA
TCCACCAGCCAGCAATCCTCTCGATCCACCAGCCAGCAATCCCCTCGATC
CACCAGCCAGCAATCTCCGTTGATCCAAACACCAGATATCATCGTTGATC
CAACAACCAGATCTCCTTTGATCCAAGAGTCGAAGCAGTTGTCCCGACGT
GCAAGCAGCGGTCTGGACCAAGGTAACGTGGCTTGACTCGAACCAAccaa
agaata
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00067249-exon-scaffold_466-1491911889:46122..47177 | TCONS_00067249-exon-scaffold_466-1491911889:46122..47177 | Clytia hemisphaerica | exon |
| TCONS_00067249-exon-scaffold_466-1510915933:46122..47177 | TCONS_00067249-exon-scaffold_466-1510915933:46122..47177 | Clytia hemisphaerica | exon |
| TCONS_00067249-exon-scaffold_466-1575043694:46122..47177 | TCONS_00067249-exon-scaffold_466-1575043694:46122..47177 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_466 | supercontig | scaffold_466:46122..47177 . |
Blast
The following BLAST results are available for this feature:
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