TCONS_00067221 (transcript) - C. hemisphaerica

Overview
NameTCONS_00067221
Unique NameTCONS_00067221
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3330

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00067221 ID=TCONS_00067221|Name=TCONS_00067221|organism=Clytia hemisphaerica|type=transcript|length=3330bp
CAGATAAAGATGAATTATAATGACTGTAGACAAAATTTCAATCCGCAGCT
TTTTGCAAGCAGCAGAAGTgggtgatttaaaaaaacttgaaaattttctg
TCAAAAACTATTGATGTTAATGTTGTCAATGAACAATCACAAACTGCACT
GCATCTTGCTGCAGCTAATGGCAGACAAAATGCAGTTCGATTTCTGGTCA
CAAAAGGGGCTTCTCTTGAATTCCCAAATTGGTGTGGATGGACAGCACTG
ATGTATGCTTCATATTATGGGCACAGTGAAATTGTGAGCTATCTGATTGA
AAATAAAGCTCAAGTTAATGCTTGTAATAGTCGATTGGTAACTCCACTCA
TATGTGCTGCTAGATGTGGCAAAACAGCTGTTATAGAAATATTGTTACAG
AATGGTGCATATATTGTTCCCAAAGTTGTTGAAAAGACTCCTACATCACA
ACTCTCTAATAAAGAACCTAATATGCCAACACCTGTTTGGCGCCCACCTA
TGACAGCCCTAATGGCTGCAGCTCAGCACGGTCACCATGGGATATGTAGC
ATGCTAATGACTTATAATGCACCCATTGATTACCAGAATGAAGCTAATGG
TTATACGGCATTGATGCTTGCTGCTGTGAATGGCCATGCCAAGATTGTTG
AGCTCCTTATACAGACTGGTAGCGCTGATGCTAATATTGTGAATTGTAGG
AATCAAACTGCTTATGTTTTGAGTATTTTACGAAAAAGGACTGATGTTGA
GAATTATTTGAAATCAAGGACTACACGTGTTACTAAAGAAATTACAACGA
AATCACATCAACCACCCATTATACAAGCTGCAAGAACAGGTAACATACAG
GAGGTTGAAAAGATATTGCGTGCAAACCCGAAACCCGATTTGAACGTCAG
TAGCACAGATGGTGTAACTCCTTTAATATTTGCTTCACTAAATAATCATA
TAGACGTTGTTAGATTACTGTTAAGAGAAGATGCAAAGACAGACTTACAA
GAAGAAAATGGTTGGACTGCATTGATGCATGCTACAATCAAAAGAAATGT
CGATATTGTCAAGTTGTTGCTGCGTGCTGGTGCAGACACCAAGATTAAGA
ACAATAAAAACCTCACTGTATTTGACCTGGCCACGCTGGCAGGTTTACCA
CAAATAACACGACTCTTTGCTCCTGGAGCTTTGGCAAGTCAAGGCAAACA
ACCTGTGAACAATGATAGgGATTTTAAAAGCTCCAAGtCGTTGTTGTCAA
AAGTGACTGGCAAGATCAAGAGAGGACAACAAGTGAATCGTGTGCCTGTA
CACGACATCAGTTTAAACCCTGTTGAAGAACACACACCAGCACATAGTGA
AGAAGTTCATAAAACAAGTTCTATTATTCAATcatttgaAGCAAGCACAC
AATCTCTTAATGGACCAACCAAACCTAAATTAGCGTTAGCTGCTCCAACA
TACAATctacctgatgacgtcatggcTCCTGTGTTACCGCCTTGCCCTAC
ATTGAAGAGTTTCGATATACCAAAACTACCGGGTGTGGGTGCAAAACAAA
CTGGACTTGGTCTGAACAGTAGTAACGGTAGTAACAGTGGAGACAATTTC
AATAGCAGTGATGAGAGTTCGTCTATCAAATCATTCAACCGTCAAAACTC
ATCATCCAGTGGTATACGGAGACCTCAGATGCAAAACAACATTTTATATC
AACAACCAGACTCGCCGCAGtcttcgatgacgtcatcaggacTATCAGGT
TTCACCTCAGTTAGCAATTATAATGGAAGAGGTTCAATGCCAAACTCTGG
TTTCAAAAGTCCCACAAATCGGCCATCATTGAATTTTGCGAAACCAAATT
TCCCATCACAATGGCAACACCAACAACCGCCGCCTCAACACCAAGCTTTC
TCACCCGCTTTCCAACCGCCCATGCCACCCTACCTCCGGCAAGGTGCTAA
GTCACCGCCCTTGACATTGAATGATTTATCAATACGTTCTGTATCTTCAA
ATTCGGGTGACAAAAATGGTGACGcaAATATCAGTGACTTTCTACAACGT
CTCGAGTTGGAAAAATATGGTGCTCAATTCTCCGAGCAAGAGGTTGACAT
GATAGCACTCCGTGAAATGGATGATAACGATTTGAAAGACATCGGAGTGG
ATCAAACCATTTATCGTAAACGTATTATTGACGCTGTTACTCCTAATcaa
aaacacAGAGGAGCGTCAAACAATCGCATTCCATCACATGCAAGATTTTC
ACCAACACCACCCGGTCAACCGAATGCACTGATTCCAACAGCTGGTTTTC
CAAAGAATCAAACATCATTTGCAAGTGGTATGAGAGGAGCCAATGGTTAT
CCATTAATACGGTAACGCACAGCAATCCGTCTAGTCCTCTGTAAgctaaa
gtttatttttttgacgtcatttaCTAGATTTATGCGGGCTTGTTTTTGCA
CACCTAACATTATAAAGAGTCCCCCATCCCTCAAGCCAAACTACGTTTAA
TAGCCTTAAAACAGACACGATTTAGTGTTCTAAAAGGGCTGAAATtctaa
tatatatttttttctgtcCGCACCAACCAAGTTGGCACTCCTTAAACATG
GTCCTATCAAAGTTGAGCCGCCGGCTGTGCCATAACTCGAACAACTATGG
CAAGATTCTAACATAAGTCTGCATTTATCTGAAACTCATATTTAGAAAAT
ATTGCGTCAGGAGGAACTTGACTAAATCTGTAAttgttttaattatttta
atgtaatttTTAATACATATATtacgaaattgaaatttttgatacAGAAA
ACTCATACTTCGATGTGGATTTAAATTTTTACGAATTATCATGTTTTAAT
GTTGTTGTTTTACAAGTTCACACATGCTTCATTCACAATATTATCTTACT
GTCTTATCAGCACTTTATCTTTTATGataagtttttattttctttcgtGA
TGCACAATTTTatgaagataattttttttagaattttttaaaacgaaaaa
aaatcatattattAGGTTGGTTATTTTATTTATGTAATTATTTGTGGTTA
GCctacttttgatttttaacaatccttttaattattttgtttttttgtga
atATTTCATTTCAGGTATTCTCTGCTACTTTCTAAgctcatttatttttg
tttggtcAACATTGGCAATAATCTTTGGATTTCTAGTTGAGGTAGAcgta
ataattatcataattttttcatttaagcttTTTTATAATCGTTGGATTAc
tgtatttcatttttttctgtacaTTATATCTCGgaatatctaattttttt
tatagcattggatttcaaaagaaatttatg
Run BLAST on NCBI

transcript from alignment at scaffold_466:285459..296385-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00067221 ID=TCONS_00067221|Name=TCONS_00067221|organism=Clytia hemisphaerica|type=transcript|length=10927bp|location=Sequence derived from alignment at scaffold_466:285459..296385- (Clytia hemisphaerica)
CAGATAAAGATGAATTATAATGACTGTAGACAAAATTTCAATCCGCAGCT
TTTTGCAAGCAGCAGAAGTGGGTGATTTAAAAAAACTTGAAAATTTTCTG
TCAAAAACTATTGATGTTAATGTTGTCAATGAACAATCACAAACTGCACT
GCATCTTGCTGCAGCTAATGGCAGACAAAATGCAGTTCGATTTCTGGTCA
CAAAAGGGGCTTCTCTTGAATTCCCAAATTGGTGTGGATGGACAGCACTG
ATGTATGCTTCATATTATGGGCACAGTGAAATTGTGAGCTATCTGATTGA
AAATAAAGCTCAAGTTAATGCTTGTAATAGTCGATTGGTAACTCCACTCA
TATGTGCTGCTAGATGTGGCAAAACAGCTGTTATAGAAATATTGTTACAG
AATGGTGCATATATTGTTCCCAAAGTTGTTGAAAAGACTCCTACATCACA
ACTCTCTAATAAAGAACCTAATATGCCAACACCTGTTTGGCGCCCACCTA
TGACAGCCCTAATGGCTGCAGCTCAGCACGGTCACCATGGGATATGTAGC
ATGCTAATGACTTATAATGCACCCATTGATTACCAGAATGAAGCTAATGG
TTATACGGCATTGATGCTTGCTGCTGTGAATGGCCATGCCAAGATTGTTG
AGCTCCTTATACAGACTGGTAGCGCTGATGCTAATATTGTGAATTGTAGG
AATCAAACTGCTTATGTTTTGAGTATTTTACGAAAAAGGACTGATGTTGA
GAATTATTTGAAATCAAGGACTACACGTGTTACTAAAGAAATTACAACGA
AATCACATCAACCACCCATTATACAAGCTGCAAGAACAGGTTTTTTTATA
TTCATATTTTGGTGGTTTCTTATTATTGATTTTTCTTTGAATTTAGCATT
AGTTTCATTTTGATGGTCAACTTAACTCAATTCAAAGTATTCAAATCTTT
CAGTAATGCGATTTACATGTTTGATTAGATTGTAGTGGAAAGTCTTACAA
GTTTTGTTTTCTTTAGTATTCGAATAATGCTCTGTTCTTGGCCTGTTGAG
AATCTCTTTAAAGTGATTTAACTGAAGATTTTTCTGATTCACAGGTACCT
AGGAAACTTAATGCTGTATCCAGAAAGCTATATAGAAACCCATAAATTCA
CATTTTAAGATTACTACTTCATATCCAGGTAACATACAGGAGGTTGAAAA
GATATTGCGTGCAAACCCGAAACCCGATTTGAACGTCAGTAGCACAGATG
GTGTAACTCCTTTAATATTTGCTTCACTAAATAATCATATAGACGTTGTT
AGATTACTGTTAAGAGAAGATGCAAAGACAGACTTACAAGAAGAAAATGG
TTGGACTGCATTGATGCATGCTACAATCAAAAGGTATTGCCAGGATTAAT
TGACCTTTTTCATTAATTACGTTACGAAAAACATCACTTGCCTCGTTTTG
AAATTATTGCCATGCCACTCCCAGCGGATTTTATTTAAACTACTTCATAT
TCATAAAAAATCATTTATATGTCTCAAGAGACATAGTCACCATAGTAATT
GTTTGGATACGAGACAAGTGATGTTCGTGATGTAATTTATGAAAAGGTTT
ATTACTGTTGGCTAACCAATTTGAAATTTAAACCGTCTCTTTGTAGCAAT
GTTTGGGCATACATAATAAGAAACTCTTTCCCTCGGGAAAACTTTTCACA
GAACTTTGATTTTGTAAACCCGATAATTGATTGTCTGGAGTCTCAGATGA
CCAAGTTTCTTAGAATTACAAGACAGTAAATGAATCAATTTTCATTGATG
AGCAGCAAATGTGGAGTATTCATAAATCGAACCTGCATATCTCAAATGTC
TCCCAGTAAGTCAAACAAGTTTTCTGGTCCCTTTAGTTAACAGTGTCTTA
TAAACCAATCTTAATGACTCGAAATTTCCACGATTCAAACAAATTTGTGC
TCCCCTTTGCGTTTGTGTTCGATTTACGGAGACTTAACTTAGGGGGGATG
TTATTTTGCAAAAATGGCATAATTTCCGACAGTTGGCAAAATGTTGAGGA
TTTTGCTAAAAACGCAATTTTTTTTATCGTTTTTCTTAAGTTACTTCTTG
TTAGAGTGTTTTTCACCCTTACAATATTGATTTTCTTAATCAGCATGAAA
ATACCTTTCAAATGAGGGGACACTTCACTATGTTTTGAAAATTTTTGAGA
TTTCGATTTTGCTGACGGAGCGGCGGTGGCACCCTACCCGTGGCAACCTT
GAAAAAAGTGCCACAGGGTTTTTACATGAATTTTTCTTCTTTTTATACCC
AAAGGCAACTTTTGACAAATGGGCTTAAAAAATTAGTCCTAACATCCCCC
CTATAACTGTATTATACCTCTAATCTCAATTTTTCAGAAATGTCGATATT
GTCAAGTTGTTGCTGCGTGCTGGTGCAGACACCAAGATTAAGAACAATAA
AAACCTCACTGTATTTGACCTGGCCACGCTGGCAGGTTTACCACAAATAA
CACGACTCTTTGCTCCTGGAGGTATGCATTTGAAATCTTTTTTTTTTTAA
GGGTATCTTTCTATTATTTTAGTACTGGTTTGTTGTAGAAAGGGGCTGGA
TAAGTACCTAAGGCAAAAAACCAAGTAGGGGGTCATTAAAATAGATTTTT
TAACCAAAAAAACTATACAATTAATCCAGTGTAAAGGCAGCGATGAGAAA
ACCAGTTAAGTTCTTTGGGTTTGTTTGACTTAACATTAATAGTGTATTTT
GATTTAATTTCAGCTTTGGCAAGTCAAGGCAAACAACCTGTGAACAATGA
TAGGTATATAAATTGTTATTATGAAATTGTTACGGCTGTTCATCTCCTCT
TCTCTCATATGACTTGTGTTGGACCAGGCATATATTTTCACATATATCTG
TCATTTGTGTTGAACAGTTGAAACCCAATACCTTAAAATTAGAATTCTGA
TGAACTAAATACTAGGCTCTAACGATATTTGACACAATATTTGTGTCGTT
TGAGTTACCACTCCGCCTTATTTTATTAGAAAGATTTAGGTCCCTGCGAC
GTGTGTGGGGCAAATCGGACCCTCAACCTTTTTATTAGTTTTGAAACACC
CGGCAGCAGCTCTTTGAGTCTATCAAAATCTATTCAATGGAATGTCCTAA
CTAAGATTGTAATTTATTCTTTTACTTTCTTTTTAGGGATTTTAAAAGCT
CCAAGGTAAACAAAACTATGTATTGTTGAACATTAGATCTTCTGCATATG
GAAGCTGGGCTTTACCTAAGATAATGTTACATATAAATGGTCAAAATATA
AGTTTTTGCCAAAATATTGGTCATACTACTTTATCTTTTGATAGAGATTT
CCCTTGCAATCTAATTATTTTTCCTCGTGTTTCTCGCGTCACAATGCAGG
AACATGTGGATTTTGACGTCAAAGCACGTTTACCAGGCCTTGAATTTAGA
ACGCTTTATTTAAAGGTTGAAGTTATGAAGAAGATATCTTTCCTTCCACT
CACTATTAGTAGGGGCCATTTGGATTTTTTGGCCATAAAAACTTTTGCCA
GGCCTAATTCACGGACCTCTCTCAAGAAAGTCCGAAAATCCTATCTACTT
TTGAAACAATCACATGTGGTTGAGTTCCACGAAAGATGCTACGGATCCTA
AGGGTCGACCTACTATATTATGGTTTTTTATTTCTTTTTAGTCGTTGTTG
TCAAAAGTGACTGGCAAGATCAAGAGAGGACAACAAGTGAATCGTGTGCC
TGTACACGACATCAGTTTAAACCCTGTTGAAGAACACACACCAGCACATA
GTGAAGAAGTTCATAAAACAAGTTCTATTATTCAATGTAAGGACATCATT
TAACATAACTACATCCTTCCTTTTACTTTCACAGCATTTTTAAACCAAAG
AAAGAATAATTTTTTCACCATTCCACATTGTGCGGAAAAAATTCAAGCAC
TTTAGTCACTAGCCGTCTTTTGACTTAGAAATTGAGTTTCGGTTTTCAGA
GTAAAAGTTGTAGGTTGGCAATACCCGCCGCAGGTGCCAACATTTTTTAG
AACCCCTACTTGGACCCCTTATGGCGGTATATCATTTTCAAGGATTAGAA
AAAAAATTTCATGTTCGCTAAATATTAAGTTTGAGTTTCAAAATTGAATA
TTTAGCTTGGAATTTTCACTGTTAACCCTGTTCGTTACTGTTCGCTGGGG
AAACTAATTTTGATAGCTCCTGAAATAATTTTCACACCTCAAGATTTTCA
CCATGATGTGTCATAAAAATTGAGACAAATTAATTGTAAGTAGCAGCGAT
TCCTTTTCTACAACTATATATTTCGTTTTATTTTCAGCATTTGAAGCAAG
CACACAATCTCTTAATGGACCAACCAAACCTAAATTAGTAAGTAACTCAT
TCACTACTCATTTTTAGAATTTTGATAATGAAGTATATTTCTTTCAAGAC
CTATGTATTCTCATTCCGTTTCTTGGTTAGTTACGCTTTAATGATTTTCA
AAAAATAGAAGCCTTTCAAATTTTCTGACACAAATTCGATTTTTCCCTAC
TACAAAAGCTTCGAAAGGTTAAAGTGACGTCAAAGAATGGAATGTTTAGA
GCCCGAAAACCTGGGCTCAAAACATTCGAAAAAGTCGCAAAGTGGAATAG
ACGTTATTGTGTAGAATAAAGCCTAGTAAAAACTATAGGGTTTTTCGCTA
TGTATCAGAGATCACCTCATTCTATTTTTGCCTTAAATTCTAATTCGAGG
ACTATAATATGATTATTTTCGTATAGGCCTTCCATATCTTTGTTTAATCT
ATTTTCAGTAGATTACTTAATCTATTTTCAGTAGATTACTACTCATTGCA
TTCGTGCATTCCCCTTTTGTTCTTTAAACCTAGTACTCCAGGCTTTTTAT
CTTCATAGACACAAGATTTTGGGCTCATAAACTAAATTAAGCAGCTTTCT
GTTATGAACAATAAATGACTTTCTTTAGGCGTTAGCTGCTCCAACATACA
ATCTACCTGATGACGTCATGGCTCCTGTGTTACCGCCTTGCCCTACATTG
AAGAGTTTCGATATACCAAAACTACCGGGTGTGGGTGCAAAACAAACTGG
ACTTGGTCTGAACAGTAGTAACGGTAGTAACAGTGGAGACAATTTCGTAA
GAATATTCTTTCGATAAAATAATTTTGTAGCTTCAGTCTTTTTTACACGG
AGATACATTTTAAATTTCTCAGTTTCTCTAAGTGGACAAGTTTATTAACG
CGGTGAAATCTTTATATCTTTTAAAGTATGTGATAAAGTAACCAGCTTAA
GAGCTCAAGCTTTCTTTCCAATTTCAATACTGAAATAATTTACTCGTTCC
AAATTTGATTAACCCATATAATATAAATTTCCTCGCTCGAAAAAACTGTG
CGACAAAATTTCTAAATTCGTAAACTCTTTATTCTGCTTTATTCGCAATT
GTCTGATAACTGAAGGCAAACCAAAAAAATGCTTTTTTAAAGAACTTATT
ACGCGGTTGTCATTATGGCTTATACTTTTTTTATTTGATGCACTATGTAT
ATTATTAACAAAAACTACACTACATAATAAAAATAAAACGTAAACACAAA
ATGGTTTTATATGTACAATTAGAATATCCTGGGTCGTTACCCGTACTGTA
ATTTTCTACTTATAGTTATATTGTTATATTTTTTTTCCCTATATAAAATG
TTCACAATCACAGATTCTGCTCGCAGAATTTCAAACTCTCAAGGTTATCT
AAGATAACCTTTCGCGATCGCAGATAACCTTTCGCGATCGCGAGCCTCGC
ACGCACCGTATTGTTGCGCGAAGGAGCGAAAAACAAAGTTTTGTGCGAAT
TGCACGTGTAATCTCGTTAACNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNAGACGTTTGTAGAATACCATGC
ATTCTTTTCCCATTGCTCCATTCGTGGAGAAGACTAGGGGAGTGAATGTT
CCATTTTCAACTTGAAGTACTCTTTCGTTGTATTGTCTTTTCTTCTCTTT
CTCGTTTGTTTCGTAGCACTTTTTAAAGAACTTGCGTCAAAAATTACAAG
AAGTCTCTATTGACTTTGAAATATTAATGAAATTAGTCATTGAATATTGA
ATATTATTTTCTACAGAATAGCAGTGATGAGAGTTCGTCTATCAAATCAT
TCAACCGTCAAAACTCATCATCCAGTGGTATACGGAGACCTCAGATGCAA
AACAACATTTTATATCAACAACCAGACTCGCCGCAGTCTTCGATGACGTC
ATCAGGACTATCAGGTTTCACCTCAGTTAGCAATTATAATGGAAGAGGTT
CAATGCCAAACTCTGGTTTCAAAAGGTAGGGTTTAGGTTCAAGGACTATA
TTCTTTTGATTCTTTAGAGAGCATTATTTTCATAATGTATAAAGAAGTCT
TCAAGAAATGTTTTGGTGACGATACCATCTTGCCCTGTATAAATTTATTC
CCTTGATACCTTGAGGTATCTTATTCCGCTTGTTTAGCTGTGATACCTTA
TATTTATAAAGCCCGAAAGGCTAGATGGCGTACTTTTGCTGAAAAGTGTG
CCATAGTTGGGTAGGAAATCCTACCTAAGTCACGTGACGTCACAATTGAA
TTTCAGCGCTTGACCAATCAGAAGCTTCGCGGGTTTTCGAAAACAATAGC
AACAATATTTTTTCCGACATTCACTTTTTTTTTGCCTGCGATGGCTTAAA
AGCACGACATCTAGTCATTCGGGCTTTATAAATATAAGTGCGGTACGTCA
TTGAGAAAAATCAATACAGCTAAAAGTGAACTATAATGTGGACCACCTTG
TTGCAGTTATATAAATACTCAAGTTTAATATCGCGAATTGCTTACCTCTT
GTTAATCACAGCAGTTTGGCAAAATTTGAGCTGAGGTAATTTTCGAAAAC
CCTGGACTCAGGGTTAAATCGCGCATAAAATACTTGGTTAGTGTTATGTA
AGTGTAAATAAGGTATATAATTCAACCGAGTTGGTAAGAGCATCCTCAAG
TTAATGAGGGAGACGATCATTTTAAGGTCTTCTTATAAATAACAAACTAA
AACTCAAGTAACACAGCTTTATATTTCATTCTAATCAAAGACAGACACCC
TTAGTCAAAACGTTAAACAGCTTTTTATTATCTACTGATATTTTATTTTA
GTCCCACAAATCGGCCATCATTGAATTTTGCGAAACCAAATTTCCCATCA
CAATGGCAACACCAACAACCGCCGCCTCAACACCAAGCTTTCTCACCCGC
TTTCCAACCGCCCATGCCACCCTACCTCCGGCAAGGTGCTAAGTCACCGC
CCTTGACATTGAATGATTTATCAATACGTTCTGTATCTTCAAATTCGGGT
GACAAAAATGGTGACGGTATGTTTTACGATTTAGATTCTCCAATTCATTA
AATTCCCCTTTATATGAAAATTAATATAGAGTCCATTTTTAGTTTTTGAT
AATGAGATCGTCCTAAAATTTCTTTCAAAACCTAGAGTTCTTGTCTTTGT
ACCACGGTTTTTACCTCATGCTTTTCGTTCCTCCGTTCTTTAATAGCAGT
CTGTTTTTGCCTATTTTTGCCTAGAGTCCAGCTTATAAAAAACTTATTGT
AAAGCGAACTTAAGGTCAAAGCAAGCTCCTTCAGAAAATAAGATCTCCTT
GTTAGTTTATCTATAATGGTGATTGGTTAGTACTAAAAGTATTTTTCAAA
ATAGTTGTTTTCTTTTCTTTAGCAAATATCAGTGACTTTCTACAACGTCT
CGAGTTGGAAAAATATGGTGCTCAATTCTCCGAGCAAGAGGTAACATTTC
TCATATCATCATTCCGTAATTCTAAAATGTCTTTATTCCAATTCATTCAG
TATTCACTCATACTGTGTTATATATGCTATGGGATATGACATTCCAGAAA
CCTGTATTTACCAACTATTTATTACACTATTGAGCCTTATATTAAAGAGA
CCGGGTCTACTTTACCAGGGAGGAATGGCACTGAAATGTCTGTATCTGTG
AGCAAATCAATACATCAGACATTCGATGTCTACTCTTCCACTGACATTCG
CTTTTCAGAATTTTTAATTTTAGGCGAGAATCGCAATTATAGTACTTTCA
ATTTATTTCATGGAATATTTTGATTTTTGAGGGTTTCAGTGGCTTCTAGG
ATATATTCCCAGCCTTATTGGAACTATTTTGAGCTTTAAGTCTCGTATAC
AAACTCTACAGTTAAAATGTAGAGTTAAAAAGTTAAAATTCTACATTCCA
TAAGTAACTTAGAGGGGATTAGCTTAGCAGGGAATTCCCCTTTTTCTTAT
ATATCTTATCCATGATTGTATCATTAGGGTGCCATCTCCAGGGTTTAAAG
CTCAGTGATTATTCCTGGTAAGACTTTGAGATTAATGTATTTTGTTATGT
ACAGGTTGACATGATAGCACTCCGTGAAATGGATGATAACGATTTGAAAG
ACATCGGAGTGGATCAAACCATTTATCGTAAACGTATTATTGACGCTGTT
ACTCCTAATGTAAGAGAAATTCATTTTTTTATTTTTTTTAAATGATTTTG
AATTTGATCAAATTTAGCCCAAAACCCTTGGGGGATAAAGGTTTGGGGGA
TGCCAAGAAGGGGGGTCAGACCCCCTTTCCGCACTATGTCATGTTTTTAT
GATAAAATATAAATAAGAAGCAATTTTAGCGTGATCTAAAACAACTCTCA
AGTTTTCATTGTACATTCACTAAAGGTTTTATTTTTACATAAGTGTTCCC
GTTTCATATCAGACACATATTTCATATCAAGACGTGTCTGTCTATTGTTA
TATTATGCTGATATAAGCAAAAAATGCTTTTTCTTTTCGTCTTTCTGACC
AATATTGCTCCACATCCATGTCAATTCAATGTAAAAAAGCTTGTGAATTA
AAATTGAAGAGTAAGCGAACGATGTCACTCTTATTTAGAAACAAAACCTT
TAAGGGACAACTGTATATTTATGCTATCAGCTGAGGATTTATATAACAGA
CTTTTGTTTTCTTTCCTTTTCAGCAAAAACACAGAGGAGCGTCAAACAAT
CGCATTCCATCACATGCAAGATTTTCACCAACACCACCCGGTCAACGTAA
GAATTAACTTTTGTTTTCTTTCCTTTTCAGCAAAAACACAGAGGAGCGTC
AAACAATCGCATTCCATCACATGCAAGATTTTCACCAACACCACCCGGTC
AACGTAAGAATTAACTTTTGTTTTCTTTCCATCGCTAGTATTGCTGAAGT
AAAGGATGTTCAAATGAGTCTAAAATTAGTTCTTTCTAATTTCGAAAAGA
TTTTTGCTTATAATTTTTATGTAATTTATTTCAACGCTTTAGTTTGCTAT
AGAAAACTAAACTTGAAAAAGTTTATGAAAGCACCTTAGATGTGCGCAGG
TTTTCAAAGCTTTGAAAAATTTGCGAATTACCGAGGTTGGGCGAGGTGTT
CCGGAATCATCCGTAAATCCGTAACACCCGAATGGTTTCCGGACACCGTC
CTACACGCATCTGAGCTGATTAGCGATTAAAAATGTTAAGTTAGATTCCT
TACGATACTAATACCTTTTCAACAAATTTTTATTACTTCTTTCCAGCGAA
TGCACTGATTCCAACAGCTGGTTTTCCAAAGAATCAAACATCATTTGCAA
GTGGTATGAGAGGAGCCAATGGTTATCCATTAATACGGTAACGCACAGCA
ATCCGTCTAGTCCTCTGTAAGCTAAAGTTTATTTTTTTGACGTCATTTAC
TAGATTTATGCGGGCTTGTTTTTGCACACCTAACATTATAAAGAGTCCCC
CATCCCTCAAGCCAAACTACGTTTAATAGCCTTAAAACAGACACGATTTA
GTGTTCTAAAAGGGCTGAAATTCTAATATATATTTTTTTCTGTCCGCACC
AACCAAGTTGGCACTCCTTAAACATGGTCCTATCAAAGTTGAGCCGCCGG
CTGTGCCATAACTCGAACAACTATGGCAAGATTCTAACATAAGTCTGCAT
TTATCTGAAACTCATATTTAGAAAATATTGCGTCAGGAGGAACTTGACTA
AATCTGTAATTGTTTTAATTATTTTAATGTAATTTTTAATACATATATTA
CGAAATTGAAATTTTTGATACAGAAAACTCATACTTCGATGTGGATTTAA
ATTTTTACGAATTATCATGTTTTAATGTTGTTGTTTTACAAGTTCACACA
TGCTTCATTCACAATATTATCTTACTGTCTTATCAGCACTTTATCTTTTA
TGATAAGTTTTTATTTTCTTTCGTGATGCACAATTTTATGAAGATAATTT
TTTTTAGAATTTTTTAAAACGAAAAAAAATCATATTATTAGGTTGGTTAT
TTTATTTATGTAATTATTTGTGGTTAGCCTACTTTTGATTTTTAACAATC
CTTTTAATTATTTTGTTTTTTTGTGAATATTTCATTTCAGGTATTCTCTA
CTACTTTCTAAGCTCATTTATTTTTGTTTGGTCAACATTTGCAATAATCT
TTGGATTTCTAGTTGAGGTAGACGTAATAATTATCATAATTTTTTCATNG
TTTCACTTCAGGTATTCTCTGCTACTTTCTAAGCTCATTTATTTTTGTTT
GGTCAACATTGGCAATAATCTTTGGATTTCTAGTTGAGGTAGACGTAATA
ATTATCATAATTTTTTCATTTAAGCTTTTTTATAATCGTTGGATTACTGT
ATTTCATTTTTTTCTGTACATTATATCTCGGAATATCTAATTTTTTTTAT
AGCATTGGATTTCAAAAGAAATTTATG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_041995XLOC_041995Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00067221-exon-scaffold_466-1575043694:295547..296385TCONS_00067221-exon-scaffold_466-1575043694:295547..296385Clytia hemisphaericaexon
TCONS_00067221-exon-scaffold_466-1575043694:295003..295207TCONS_00067221-exon-scaffold_466-1575043694:295003..295207Clytia hemisphaericaexon
TCONS_00067221-exon-scaffold_466-1575043694:293865..293998TCONS_00067221-exon-scaffold_466-1575043694:293865..293998Clytia hemisphaericaexon
TCONS_00067221-exon-scaffold_466-1575043694:293583..293622TCONS_00067221-exon-scaffold_466-1575043694:293583..293622Clytia hemisphaericaexon
TCONS_00067221-exon-scaffold_466-1575043694:293181..293199TCONS_00067221-exon-scaffold_466-1575043694:293181..293199Clytia hemisphaericaexon
TCONS_00067221-exon-scaffold_466-1575043694:292550..292694TCONS_00067221-exon-scaffold_466-1575043694:292550..292694Clytia hemisphaericaexon
TCONS_00067221-exon-scaffold_466-1575043694:291999..292048TCONS_00067221-exon-scaffold_466-1575043694:291999..292048Clytia hemisphaericaexon
TCONS_00067221-exon-scaffold_466-1575043694:291240..291407TCONS_00067221-exon-scaffold_466-1575043694:291240..291407Clytia hemisphaericaexon
TCONS_00067221-exon-scaffold_466-1575043694:289911..290119TCONS_00067221-exon-scaffold_466-1575043694:289911..290119Clytia hemisphaericaexon
TCONS_00067221-exon-scaffold_466-1575043694:288870..289084TCONS_00067221-exon-scaffold_466-1575043694:288870..289084Clytia hemisphaericaexon
TCONS_00067221-exon-scaffold_466-1575043694:288446..288513TCONS_00067221-exon-scaffold_466-1575043694:288446..288513Clytia hemisphaericaexon
TCONS_00067221-exon-scaffold_466-1575043694:287727..287831TCONS_00067221-exon-scaffold_466-1575043694:287727..287831Clytia hemisphaericaexon
TCONS_00067221-exon-scaffold_466-1575043694:287140..287212TCONS_00067221-exon-scaffold_466-1575043694:287140..287212Clytia hemisphaericaexon
TCONS_00067221-exon-scaffold_466-1575043694:285796..286639TCONS_00067221-exon-scaffold_466-1575043694:285796..286639Clytia hemisphaericaexon
TCONS_00067221-exon-scaffold_466-1575043694:285459..285674TCONS_00067221-exon-scaffold_466-1575043694:285459..285674Clytia hemisphaericaexon
TCONS_00067221-exon-scaffold_466-1510915933:295547..296385TCONS_00067221-exon-scaffold_466-1510915933:295547..296385Clytia hemisphaericaexon
TCONS_00067221-exon-scaffold_466-1510915933:295003..295207TCONS_00067221-exon-scaffold_466-1510915933:295003..295207Clytia hemisphaericaexon
TCONS_00067221-exon-scaffold_466-1510915933:293865..293998TCONS_00067221-exon-scaffold_466-1510915933:293865..293998Clytia hemisphaericaexon
TCONS_00067221-exon-scaffold_466-1510915933:293583..293622TCONS_00067221-exon-scaffold_466-1510915933:293583..293622Clytia hemisphaericaexon
TCONS_00067221-exon-scaffold_466-1510915933:293181..293199TCONS_00067221-exon-scaffold_466-1510915933:293181..293199Clytia hemisphaericaexon
TCONS_00067221-exon-scaffold_466-1510915933:292550..292694TCONS_00067221-exon-scaffold_466-1510915933:292550..292694Clytia hemisphaericaexon
TCONS_00067221-exon-scaffold_466-1510915933:291999..292048TCONS_00067221-exon-scaffold_466-1510915933:291999..292048Clytia hemisphaericaexon
TCONS_00067221-exon-scaffold_466-1510915933:291240..291407TCONS_00067221-exon-scaffold_466-1510915933:291240..291407Clytia hemisphaericaexon
TCONS_00067221-exon-scaffold_466-1510915933:289911..290119TCONS_00067221-exon-scaffold_466-1510915933:289911..290119Clytia hemisphaericaexon
TCONS_00067221-exon-scaffold_466-1510915933:288870..289084TCONS_00067221-exon-scaffold_466-1510915933:288870..289084Clytia hemisphaericaexon
TCONS_00067221-exon-scaffold_466-1510915933:288446..288513TCONS_00067221-exon-scaffold_466-1510915933:288446..288513Clytia hemisphaericaexon
TCONS_00067221-exon-scaffold_466-1510915933:287727..287831TCONS_00067221-exon-scaffold_466-1510915933:287727..287831Clytia hemisphaericaexon
TCONS_00067221-exon-scaffold_466-1510915933:287140..287212TCONS_00067221-exon-scaffold_466-1510915933:287140..287212Clytia hemisphaericaexon
TCONS_00067221-exon-scaffold_466-1510915933:285796..286639TCONS_00067221-exon-scaffold_466-1510915933:285796..286639Clytia hemisphaericaexon
TCONS_00067221-exon-scaffold_466-1510915933:285459..285674TCONS_00067221-exon-scaffold_466-1510915933:285459..285674Clytia hemisphaericaexon
TCONS_00067221-exon-scaffold_466-1491911889:295547..296385TCONS_00067221-exon-scaffold_466-1491911889:295547..296385Clytia hemisphaericaexon
TCONS_00067221-exon-scaffold_466-1491911889:295003..295207TCONS_00067221-exon-scaffold_466-1491911889:295003..295207Clytia hemisphaericaexon
TCONS_00067221-exon-scaffold_466-1491911889:293865..293998TCONS_00067221-exon-scaffold_466-1491911889:293865..293998Clytia hemisphaericaexon
TCONS_00067221-exon-scaffold_466-1491911889:293583..293622TCONS_00067221-exon-scaffold_466-1491911889:293583..293622Clytia hemisphaericaexon
TCONS_00067221-exon-scaffold_466-1491911889:293181..293199TCONS_00067221-exon-scaffold_466-1491911889:293181..293199Clytia hemisphaericaexon
TCONS_00067221-exon-scaffold_466-1491911889:292550..292694TCONS_00067221-exon-scaffold_466-1491911889:292550..292694Clytia hemisphaericaexon
TCONS_00067221-exon-scaffold_466-1491911889:291999..292048TCONS_00067221-exon-scaffold_466-1491911889:291999..292048Clytia hemisphaericaexon
TCONS_00067221-exon-scaffold_466-1491911889:291240..291407TCONS_00067221-exon-scaffold_466-1491911889:291240..291407Clytia hemisphaericaexon
TCONS_00067221-exon-scaffold_466-1491911889:289911..290119TCONS_00067221-exon-scaffold_466-1491911889:289911..290119Clytia hemisphaericaexon
TCONS_00067221-exon-scaffold_466-1491911889:288870..289084TCONS_00067221-exon-scaffold_466-1491911889:288870..289084Clytia hemisphaericaexon
TCONS_00067221-exon-scaffold_466-1491911889:288446..288513TCONS_00067221-exon-scaffold_466-1491911889:288446..288513Clytia hemisphaericaexon
TCONS_00067221-exon-scaffold_466-1491911889:287727..287831TCONS_00067221-exon-scaffold_466-1491911889:287727..287831Clytia hemisphaericaexon
TCONS_00067221-exon-scaffold_466-1491911889:287140..287212TCONS_00067221-exon-scaffold_466-1491911889:287140..287212Clytia hemisphaericaexon
TCONS_00067221-exon-scaffold_466-1491911889:285796..286639TCONS_00067221-exon-scaffold_466-1491911889:285796..286639Clytia hemisphaericaexon
TCONS_00067221-exon-scaffold_466-1491911889:285459..285674TCONS_00067221-exon-scaffold_466-1491911889:285459..285674Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_466supercontigscaffold_466:285459..296385 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.30023	1.81133	0	0.617274	17.1692	14.5364	22.4919	23.0816	14.0873	17.3721	17.0009	12.4938	14.5929	16.5497	11.4966	14.1486	7.80863	11.0049	12.7197	14.6701	9.15914	9.19781	7.88005	9.68123	11.9665	14.7265	43.5801	35.4251	23.9151	21.4251
Blast
[Close]
BLAST of TCONS_00067221 vs. Swiss-Prot (Human)
Match: ANKS6 (Ankyrin repeat and SAM domain-containing protein 6 OS=Homo sapiens GN=ANKS6 PE=1 SV=2)

HSP 1 Score: 200.675 bits (509), Expect = 5.844e-53
Identity = 122/354 (34.46%), Postives = 194/354 (54.80%), Query Frame = 2 
Query:  119 NVVNEQSQTALHLAAANGRQNAVRFLVTKGASLEFPNWCGWTALMYASYYGHSEIVSYLIENKAQVNACNSRLVTPLICAARCGKTAVIEILLQNGAYIVPKVVEKTPTSQLSNKEPNMPTPVWRPPMTALMAAAQHGHHGICSMLMTYNAPIDYQNEANGYTALMLAAVNGHAKIVELLIQTGSADANIVNCRNQTAYVLSILRKRTDVENYLKSRTTRVTKEITTKSHQPPIIQAARTGNIQEVEKILRANPKPDLNVSSTDGVTPLIFASLNNHIDVVRLLLREDAKTDLQEE-NGWTALMHATIKRNVDIVKLLLRAGADTKIKNNKNLTVFDLATLAGLP--QITRLFA 1171
            +  +E   TAL  AAA G +  VRFL+ +GAS+   N  GW+ALM A+ +GH  +   L+++ A VNA N    + L  A+R G   V+++LL+ GA+    V    P+ +      +   P+    +TALMAA QHGH  +  +LM + A  ++     G++ LMLAA+ G   + + L++ G A+ + ++   +TA+ +++  K  D+ +YL   TT V  +   +  +P I  A + GN Q V++I   +P   +N+ + DG TPL+ A++   + +V+LL+   A  D Q+  +GWTALM AT   N +IVK LL  GAD  ++     T FDL  L   P  ++ RL A
Sbjct:   72 DCSDEAGNTALQFAAAGGHEPLVRFLLRRGASVNSRNHYGWSALMQAARFGHVSVAHLLLDHGADVNAQNRLGASVLTVASRGGHLGVVKLLLEAGAF----VDHHHPSGEQLGLGGSRDEPL---DITALMAAIQHGHEAVVRLLMEWGADPNHAARTVGWSPLMLAALTGRLGVAQQLVEKG-ANPDHLSVLEKTAFEVALDCKHRDLVDYLDPLTT-VRPKTDEEKRRPDIFHALKMGNFQLVKEIADEDPS-HVNLVNGDGATPLMLAAVTGQLALVQLLVERHADVDKQDSVHGWTALMQATYHGNKEIVKYLLNQGADVTLRAKNGYTAFDLVMLLNDPDTELVRLLA 415
The following BLAST results are available for this feature:
BLAST of TCONS_00067221 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ANKS65.844e-5334.46Ankyrin repeat and SAM domain-containing protein 6... [more]
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