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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00067188 ID=TCONS_00067188|Name=TCONS_00067188|organism=Clytia hemisphaerica|type=transcript|length=2025bp
GTTCAATTAACATAAAGACTGGAGTAAATGGCTTCAGCTTATCACGGCCA
GTGAAACACAAATATATACGTCATAATAAATACGACACCCAAATTACAAT
AACACTAAATGGTGGGTCAAGCATTTACCGATGATGTCATCAATCCTGGC
CGCTCGTGTCCGGATTTGACCACAACCGTGGAAATGTCCGAGGTTAGTGA
CGTCATCCAAACACTAACGGATTCAGATAAAATTGTCACTTCTGGCTCTA
TAACGCCGCACTCAAATGGGACAGTGGCAAAAAAGAGGCCGGACTTGGCG
TTAGATTTGAGTGATATTAGTTTTACGGAACCAACTCCCGGGCAGAAATG
TTTCGGTGAAAAATCAGATGTGGAACGAGTGTTAGACAGTCGTTGTCCTT
GTTTACAATCGAAATGTCTTCATTTATCTGGAACTTTCTTATTAATAGCA
ATTGTTGGTATTGttgttatatttttctttcgacGCTACCTTAAAGACTG
TATGCAATGGCTTGAAAACGCCGATGGATGGGTCAGCGGTCTATTGTTTA
TACTAATGTTTACACTTGTATCGTTCCCAATGACGTGGGGTTATATCTTC
TTAAACGTGGCTGCGGGTTATTTGTATGGCTTTCTAATGGGTTTAGTCAC
CGTAAACGTATCAGTTTTGGTCGGAGTTGCAGTCTCCCTTGTCGTCTGCC
GTAAAATTATCCGTGGATTTGTGACGTCAAAATTACAATCAGAACATTTG
AAAGCTATCATAAAAGTGGTGGAAAGTCGACGTGGTTTCAAAGTTCTTGT
GCTAACCCGTTTGACACCTATCCCGTTTGGATTGCAAAACGGTTTATTTG
CTATCACCAATATGCCGTTATCCAAATGTCTGCTCGGTTCATTTATCGGT
TTATTACCCACTCAAGCATTAAATGCGTATCTTGGATCGACATTACGTTC
AATGGAAGATGTAGTACACAGTAACTCGGCTGGTGGTTATCTTATATTAG
GTGTACAAGTTGGTATAAGTGGATTTTTGATGTGGTATGTGATACGACGT
GCTAGATACGAACTTAACAAAGCGTGTTTACCAAACGAAAACGAATTTGA
TTATTCATCTTTAACGAACTTTACATCATCTTCGAGTAAAGATAAAATTA
CAGTAAGGACTCCACAACCTTTACCGCTGACTAGGGCGAATAGTGGTAAA
GGTTTTCGGTACTCGGCATTACCGACTTCCGACGATGATGACGTTACCAT
TAAAGGACAGAAAAATACTGCCAAGAAACAGGGCCATAAAAGGGCGCATT
CCGCCTCGGCTATATTATACGCTCTACAGAATCGAGATGACGATTAGTTT
ATTTGATTTCGTCAATAAAATTCTCAGATGGTCTTcttatttttatatat
tatagtCTCTTCTTTTTCCCGTATTATTTTGATACTATCGTGTCAATTAG
GAAAATTGCCTGTAATTCGTCTAACCTTAAGAATAAAGCGTTTTCCCCAT
CGATTAAACATTTTCTACCGACTTATGACATCATTACAAAGTTTTAGTTA
ATATTATATTCGATAAATTATTCCAGTAAAGATTTTTCAAGGATCTAACT
ATTGTTGGTCTTGTTGGTCATCTAGAAATGGTCTTTTATTTAGTCCAAGG
TTGTTTACAAAGACTTAAAACAGCCTGGTATTATATATAGACTTAAACTA
AAACTTTAATTCAAGGATGAATAGACTCGCCGATACGTCATTGGTCTTAT
TTTTAGCCTCTGTCCGACGATCTCATTACTAGGAATAGTTTAAATTATTT
TACCCTTTCTTTTTgacattatatattttttcgttttataGTTGGAAATT
ATTTATATATCTTGAGTACTAAGGTCGGTCAGAGAAAGTGTTTTTTTATA
CTGAAAACTATTTGTGAATAATCCCTAAATGAAATCATTGAATGAGAAAA
ATTAGATAGAATTAAttttaatatgaaaatatttagattCTTACCTTATT
TTCAAACCCTTGGCTAACTTTCAAG Run BLAST on NCBI protein sequence of TCONS_00067188-protein >TCONS_00067188-protein ID=TCONS_00067188-protein|Name=TCONS_00067188-protein|organism=Clytia hemisphaerica|type=polypeptide|length=412bp
MVGQAFTDDVINPGRSCPDLTTTVEMSEVSDVIQTLTDSDKIVTSGSITP
HSNGTVAKKRPDLALDLSDISFTEPTPGQKCFGEKSDVERVLDSRCPCLQ
SKCLHLSGTFLLIAIVGIVVIFFFRRYLKDCMQWLENADGWVSGLLFILM
FTLVSFPMTWGYIFLNVAAGYLYGFLMGLVTVNVSVLVGVAVSLVVCRKI
IRGFVTSKLQSEHLKAIIKVVESRRGFKVLVLTRLTPIPFGLQNGLFAIT
NMPLSKCLLGSFIGLLPTQALNAYLGSTLRSMEDVVHSNSAGGYLILGVQ
VGISGFLMWYVIRRARYELNKACLPNENEFDYSSLTNFTSSSSKDKITVR
TPQPLPLTRANSGKGFRYSALPTSDDDDVTIKGQKNTAKKQGHKRAHSAS
AILYALQNRDDD Run BLAST on NCBI transcript from alignment at scaffold_466:236443..246613+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00067188 ID=TCONS_00067188|Name=TCONS_00067188|organism=Clytia hemisphaerica|type=transcript|length=10171bp|location=Sequence derived from alignment at scaffold_466:236443..246613+ (Clytia hemisphaerica)
GTTCAATTAACATAAAGACTGGAGTAAATGGCTTCAGCTTATCACGGTAt
gtggtttttctttttttcgtaaagttttttttaaattgatttttggaGGC
ATTCTTACGAGATTCAAGATTTTTATAGGAAGTTTAACAAGATATTTCCg
agaaatttgtacttttgtgGAAAACATCCATCATGTCTTTGCTGTGTTGC
GGTGTTATAAAGGAAACTCATTGGTTTGTCAGGACAGTTGATtgctgttt
tgatttttatctgTTATTTCTATGGTATTTCGATggtaagaaaaatgaaa
gaaagtgcGAAAGGGCTAAAACGTTTAAAGAAATACATTTTAAtgataca
cctttttttataagaacaaactataaaagaacataaggcttcgatggcca
acttgttaagaacaatttaagaacattttaaaggttCTTTAGACTCGAAA
ATACCCGATTTCTcataaaaatggacaaaaatactcaaaaaatggcgtaA
ATATGAACATCTTTatgcttgaaactcaaaaagttaagaacatcacaagg
cttttggaaaattttggatgttcttataaaaaaacgtgtaaagaaAAAAG
GTGTGCATCTTATGCTGGCAAAGcagaatttccaaaaatattttcaaaat
tttggctaGCACGGCGCGGGAGGATGGGaaatttgttctttcttttgttt
taaaaatgcagTGTAGGTAAAAGGGTATACCCAATCTTCTTTATTTATTG
CCATTGCTTCAAACACGTGCCACATACAAAAAGCAGAGTTTGTGGAAAAA
AAGAAAGCTTTTTGAACATCTATCGTATTGCtgttattaccgagtttatg
tatttgcacttttgaggacggtagagtaactgaagcgatttggaaaaacc
cgcaattccgccccgcaaaatcgaggacggtaaaagtgctgatttaccgt
cgtcctcagctggtcaggatctactcaaattagaaccttaccgtctccgt
cgctgaaaaacacacatatatAAACTCGTTATTGCTCAAGAGATGCGTCC
GTCAAAGCCGCAGAACTCACCGATAACAATCTGTTTCTATTAAGTTTCTT
ATTAGGAATTCCTCCATTCATTTTTGACTTTACTTATCTTGACCAACGTC
CTTGGTTActttatggatttttttcagaGTTAAACTGTAATTCTGCCCTT
TGCAATTTGAAGCAGAAATCCTGAGTCATTGAGTTGAGACACTGTATTTC
TAACATAGCTCAGGCTCTCTGCACCATAGGTGCTGCTCCTGATcctgttt
cttctttttgtagTCGAGCTATTTAGTTCTTCTCCAAGCTAGAGTTTTTC
TTGCTTTAGTCATTTTTGTTCTACAATTTTCCCTCTACTTAGCATGGCTA
CCTACTGTGTTTTTAATCACAAAGTTACAGGGGTTCAATTTGAATGGTCT
CTGTTGAACAGGTTTATGTATTTCATAGGACAAATGAAAAGTTTATTTAT
TACGTCATAGGTCAGTAGGGGTGTGAACATTCCCTTCACTTTGCGCTGTG
TTCTTGAcgcattttaactttttgtcCTAACTGGATTTCTTCataatttt
ttgcagaaaaatgatggaattgtatttcttttttgattttaaggaaagat
aataataatgaaaatattgttaGCATAAAGGTGTGGTTTATCGATACTTT
TTTTGGTCTCgttttcttttatctttttctgATACAGATCTGTCTGTCTG
GACTTTATCTGATTATAAACAAGGCTTTTCGCAGCCATTTACATATTACA
ATTGACTTTCGCTTTTATTCGAGCTCGAATTGGGAATCTagtttgttcga
attacagagagactcaaattatagaaagcatCTTAAGAGGGCTTCTATCT
GACgggactggaaacaagttcgaattatagagagatttgaataatagaat
ttcGAGTAAGCGAGAGTTCACTGTATCTAAGAAATTGTTGTAAACTAAAA
AATCATTATAGATTCAGAATGCTCGTATATATACCGTCACATAAACTTTT
AAGACACGGATTCCATTTTGTTTAATAATCTACTCATTTTTCTCTcctta
ttctttttttattcaaatgacaaaaaatattgatgTATGACAACCTATGA
CGAAAGCTTATTTGTATGcgcgaatgatttcaaagaaagAGAGAAGGTTG
AGAAagtagagaaaaaaaatcactttttgtcATGATTTCGTATCTATATG
GGTTGCTACACTTTGATATATATTTCACTTCAGAGCTGTGATGGCATTTT
GCAAGAGTAGTGGCAAAGTGGTAGTACATTGTTAACGAGTTTTTATACTG
TGAACGTGCGCTTTTATTGAGAGTGGTGACATGGCTAAGTGTTAGTAAAG
TCTTAGAATAAAAATGAGTTTGTATACTTTGGTTATGAtttaaatagttt
tatttttttcgactACACATTTACACAGGCCTTTCACAGTGAATACAAAT
GACCAGAAGCCAGTCAgtatacacccctgtatctcGCGAGATGAAAGTAG
ACAAGGTGTTATATTATTAGGTATGGAATGTTTAGTTTGAACCATTCTGA
GAaaatttcgaccatgattgtagatagaATACCCAGTTGAACTGCTTCTC
TGAGTGTTCTCAAATGGCGCGGACTGCGGTTTTGGTGTTGGTCTGGGCTG
CGCTGTCCCTATTGGTAGTACCCTGTCAAAAAGATActaaaagtatcaaa
aaatcaACGTCTATTTTCCCTTAACCGTTAGTAATTAATTTTGTTAACAA
ACGCGTCATCGttgatttgatttttgtgtTTGCTTATGTTTTGATGTCAA
GGTTGAAATGACTCTCTTCTCAGTCTTGCTTCCTTTTTACGTCACTTTTC
CAAAACACGTGAGCTATGTGTGGtttctcaaaagcattttctttgagttt
AGATAGATATACGTGCAATACCATAATGTTataaatgttaaaaattttgt
tCTGTAGTCAACTAATGACTAATTGCACCACTGACAAGAATAGTGCAATA
GAGAAACGAAGTGTGGCTAAGACGACACAAGCCTAAGTAGAAACTTGTCG
AATATTGGCACTCTTCTGCGTGGTAGCGCCGGAGTAGTGGTTTTGTGTCA
AGTGTAGACTCTTGCTTTGGAAGTTTGGCTGTTTTTTTCCGTTTGTATTA
GAAAACAGTGCTTGTGAAGAGGAGTGATGTTGGTATAATTGTTAGCCATC
ATAACTATGTTTGCAAGTCCTTTTTTCGCTTTGGAAATTTACCATATGTG
CCAGTATATTCTTCCAAATTGATTTCATGCAAGTTGCTAGGGGGTTGCTA
GCAACTAGGTTTTTATAAAGAGGTTGAAGGTTGAATGTTTTAgtggaaat
tacaaaatcttgtTGATGGTGTTTTGTATAAGACGTTTAATACGTTCATT
GTACAAACACAGTCTACAATATTTTGTAAGTAATTATGCATCAGTTTTAT
TTTATGTTGTTGAAATCTGGCTCCGTTACAATTGCATAAAGATTCATGAT
ATGTGATTGATATGTGTGTCAAACATTCTTAAGGAGCTTTTTAGACACAC
CTCTTTCATCTTATGAAGCAATTTATGTCGTGCATTTTTCTGGCTTTATT
AGAATCACTCAATACTGTAATTATAATGAAGTGATTCACTTATGAGTGTG
ATTGCTTTACCATATAGCAGTCATACANGTTGCTAGGGGGTTGCTAGCAA
CTAGGTTTTTATAAAGAGGTTGAAGGTTGAATGTTTTAgtggaaattaca
aaatcttgtTGATGGTGTTTTGTATAAAACGTTTAATACGTTCATTGTAC
AAACACAATCTACAATATTTTATAAGTAATTATGCATCAGTTTTATTTTA
TGTTGTTGAAATCTGGCTCCGTTACAATTGCATAAAGATTCATGATATGT
GATTGATATGTGTGTCAAACATTCTTAAGGAGCTTTTTAGACACACCTCT
TTCATCTTATGAAGCAATTTATGTCGTGCATTTTTCTGGCTTTATTAGAA
TCACTCAATACTGTAATTATAATGAAGTGATTCACTTATGAGTGTGATTG
CTTTACCATATAGCAGTCATACATGTATCGTTTGTAAAAATCTAATTTGT
TCCATATTCGAATGAAAATTTATGCTCTTCGCTTTACCCTATCATCTGTA
CATCCTTTTGATGGAATTTTGATTAACATAATGATCATGACTTTAATCTT
AAAGCCAGCTCACAAATCCTATAAGATTTTATGAGATTATTTTTTCAGGA
GTTGTTTTATCGATTATCTATCAAGCAGTAGCAAATTTTAGCCTTAAATC
CAAGTTCAACCTCAATAGTTCAAATTGATAGATCTATTAGTCCCTTTACG
TATTTTTTACTCGTGTTAATAATACTTAGAGCCTTGAgtaatttaaacta
aaaaaatgcatttggtcataattattataatttgCTGAAGCACAGTTTTc
atgtttaattttttcttaaaatttgcaCTTTTCTGTTTGACTGAAAAGAT
ccgattttttctttctttatttaacCAATAATGTATACCTTCAAAACACT
ATTTAATTTCAACCTGTGCTATGTGTTTTTATTTGTAATGTATATAAAAA
CTTGCAATATATTGAAATTCTAACGGTGTAATTTTACTGCCACTATAAAG
aaactgaaaggaaagaaaaaaattactttgaacgtattactaaataaaaa
taagccCTTATAATATAAAAGGGTTGACACAATATGCTTGACATTGTTTT
TGACTTACTTGTAATTGCTAGTAAAAGATTAACATTTTTTATTGATGACT
GTAGTTGTTCGAGATACTTATCTACCATCCAGTGTGGGGCCAACAAACTA
GAGTTCGACCAGTGTTAAAGAGTGATAAAGCAAGGACAATTTCAATACAA
TTTTAAGCGCATAAAGTGGATTCGTTTGAATGGAGATatactatctttca
ttttattactacacgttttttttttataaggaaccttaactttgctctga
gcctggagttccttatttttacagaNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtattctcagcctgagca
gttccttaacaattccttattttttgaaccattttcagcctcgagttcct
tataaacgtgttccttataaaaaaaaaaacgtgtaatctttATTAGCTCT
TGATTGTGGATCACGAATTTTAGACTCCCAGATTAGTTTAACTGAAATCA
GTGTAGATCAGATTCCTTGCTGACAAgcaacactttttttataagaacat
ccaaagattttgaagccttcggacgttcttaacttttttggttttaagcc
taaaaaagttcttaacatttcttatttttaccatttttgagtatttttgt
gtaatttcctGAGAATGATGTATTAGATTccgcaaaaccttaaaatgttt
ttaaattgttcttaatattttagcatcgaagccttatgtccTCATCTAGT
CTgctctcataaaaaaatatgtattaaTAATTAATTCTAGGCATCATTAC
ATGGAATTACTGTGTTCTTTGACACTGTTTGTAGACTTTACCTGCACATG
AAAATCTCGGTTTACTATTTTCGAATAGAACAAAAGCAGTGCAGTCACTT
TGATCCTTGTCAAATCTCAGTCGCTCAGCGTAAAAAGCCTCTACTCAAAA
GAAAGACATTTTTGTCCCTGTCACTTCTGGCTCTTGAGAGATATTTTGGT
CTCATATTAATTTCCAAGCACACAGTAAGAAATTTAATCTTTTAAGCTAA
TAGAAAAGGTTTTTAATATTGCCTTTCAGAGTAATTTGAAATTGTTCTAG
attaataaaaaagaagaaatacacAAAAGATGTTTCAGATTTAGACCCTA
AACTTTTAGGACCTTTTTACAGTCTCATAGAACTTCTTACATAAAATAAT
ATGCTAATAATATAATGAGAACCACTCTCTATTGTGATTTTGAACTGACA
AAACATAACTGAGATGTCGTGCAGCTATTAGGTGTGCTAAATATAAAAGA
GTTTCAATGCCATTTTTTTATTGTCTTAATCCATTAGCGATTACTTGTCA
TCATTATTGACAATTATAAGTCAATTACAATAGTTTAAAGATAATTACTG
TTGTTGATGAGAATATTGTATTTTGAAGGAACTGTTTTGCTCATTTACTC
AATGAATAACTCCTTTTTTTTGTCAATCTGCTTATTTTTCACATGGTTGA
TGCATCGTCGAAATGGGCGTTGTTTGTATTTTTTGGGAACTTTCTTTCTT
TACAGAATTCGTATGCCATTCCAAAGCTGTTTGACTTACTAAAGTATTAT
ATTTAGACTTATATGTACTGTACTTTTTGTCTGAAACCTAGATCCACTGA
tttctataatttgaagatAGAAGTATCGGTTTTAGAGTGTTTTTTTCAAC
AAGCAGTTGCTTGAATTAAAGTTAGTGACGTCTAAATAAATCTTCAAATT
CTGTGATTTAACCTTGGAATGATTTCTTTGCTTTATTTTTAGGCCAGTGA
AACACAAATATATACGTCATAATAAATACGACACCCAAATTACAATAACA
CTAAATGGTGGGTCAAGCATTTACCGATGATGTCATCAATCCTGGCCGCT
CGTGTCCGGATTTGACCACAACCGTGGAAATGTCCGAGGTTAGTGACGTC
ATCCAAACACTAACGGATTCAGATAAAATTGTCACTTCTGGCTCTATAAC
GCCGCACTCAAATGGGACAGTGGCAAAAAAGAGGCCGGACTTGGCGTTAG
ATTTGAGTGATATTAGTTTTACGGAACCAACTCCCGGGCAGAAATGTTTC
GGTGAAAAATCAGATGTGGAACGAGTGTTAGACAGTCGTTGTCCTTGTTT
ACAATCGAAATGTCTTCATTTATCTGGAACTTTCTTATTAATAGCAATTG
TTGGTATTGttgttatatttttctttcgacGCTACCTTAAAGACTGTATG
CAATGGCTTGAAAACGCCGATGGATGGGTCAGCGGTCTATTGTTTATACT
AATGTTTACACTTGTATCGTTCCCAATGACGTGGGGTTATATCTTCTTAA
ACGTGGCTGCGGGTTATTTGTATGGCTTTCTAATGGGTTTAGTCACCGTA
AACGTATCAGTTTTGGTCGGAGTTGCAGTCTCCCTTGTCGTCTGCCGTAA
AATTATCCGTGGATTTGTGACGTCAAAATTACAATCAGAACATTTGAAAG
CTATCATAAAAGTGGTGGAAAGTCGACGTGGTTTCAAAGTTCTTGTGCTA
ACCCGTTTGACACCTATCCCGTTTGGATTGCAAAACGGTTTATTTGCTGT
AAGTATTTCTTTCCGTTTTTCAAACAACCAAAGTCTTCCTCTGTTATAGA
GAGATAATATATAAAACACAATATTGCTCTGTTTgcttctacacgttttt
tcataagaacataaggcatcgagggccaaaaaaattaaaaacaagttaag
aacattttaaggttttgtggACTCTCAAacggccaatttcttaagaaaat
gaacaaaagaaTTCTCAcacaatggtgaaaataagaacatttaggtaagg
aaaatttttaggctcaaatctcaaaaagttatgaacatcctgaggcttca
aaaatttaggatgttcttataaaaatcgtATATGTATAGGACACCCCGTT
GAAAATCTCTTAAATTCTTATACCATCCTCACTTTTACTGGTAAGATATT
GAAATAAGTGTCTCTTTTGTCACAGAAGCAAAACATCTTGTTAACATCTT
GAAAAATGGTCTAATACCCAGAGTTATACTACGTACCCACATATGAATTA
AACTATTCCATGCGATTTGTTATGAATGGGTGTGTGTTTGTTTTATCTCT
GTAAAAttactacagggtgtccctaattaaagtatcgagtttgaacatgc
gattgagtagaaaagtttgtgtgtgttatcgctaaaatataagaacgtct
tccatcacacaggcttattacaaaaggtagttacaacgtataaattaatc
gtaatgacaaagaaaaaagagggagagcttaaaatacaattttgtgaaca
cgcacataaaactttctactcatagttgtgtttcgactcgatactttaat
tagggacaccctgtatatctCAAAGTTGCATTCCTATAATTACACCCTAA
TGATCTAATTCCCTGCTCTAATTTCACAATCACAATGCTATAATTGTGAA
GAATTCAAAAATGACTTCGaattattttaacagtttttgatttttctcct
tGCCCAAGATAACGAGTTCATTGTGCTCAAAAAATGATTAGAATACCTTT
ATAAGGGTTTATTTTTGGCAACTCATTAAAACCGATTAAATAAAATAGTC
CAACTGATTTGATCTAATGTTTAATTTGTCAAAATCAACGCCCAAAACTC
TTGTCCTTTTACAAGTCATTTTCAAAGAGTGCTAGAATCACCCGTGTTTC
CGACTTGAAGATTtaactgaaaataaatttggtGGTAGAAATACCCTCAG
AATGGAAACTTCGAAAACACATTGGCTTTTACATCCCCATTGGTATAGAA
TTTTTTCCCATGAGAGAAAACTTCCTCACTGAGACACTGAGACAGAGATG
TGTTGGTAGTGCGAGAACTCTTACTGTAGTATATTAGAGTTTCCCCTTTC
AAGCTCtataactgaaaatataatCTCTACTTCCAATTCTATTTCCAGAT
CACCAATATGCCGTTATCCAAATGTCTGCTCGGTTCATTTATCGGTTTAT
TACCCACTCAAGCATTAAATGCGTATCTTGGATCGACATTACGTTCAATG
GAAGATGTAGTACACAGTAACTCGGCTGGTGGTTATCTTATATTAGGTGT
ACAAGTTGGTATAAGTGGATTTTTGATGTGGTATGTGATACGACGTGCTA
GATACGAACTTAACAAAGCGTGTTTACCAAACGAAAACGAATTTGATTAT
TCATCTTTAACGAACTTTACATCATCTTCGAGTAAAGATAAAATTACAGT
AAGGACTCCACAACCTTTACCGCTGACTAGGGCGAATAGTGGTAAAGGTT
TTCGGTACTCGGCATTACCGACTTCCGACGATGATGACGTTACCATTAAA
GGACAGAAAAATACTGCCAAGAAACAGGGCCATAAAAGGGCGCATTCCGC
CTCGGCTATATTATACGCTCTACAGAATCGAGATGACGATTAGTTTATTT
GATTTCGTCAATAAAATTCTCAGATGGTCTTcttatttttatatattata
gtCTCTTCTTTTTCCCGTATTATTTTGATACTATCGTGTCAATTAGGAAA
ATTGCCTGTAATTCGTCTAACCTTAAGAATAAAGCGTTTTCCCCATCGAT
TAAACATTTTCTACCGACTTATGACATCATTACAAAGTTTTAGTTAATAT
TATATTCGATAAATTATTCCAGTAAAGATTTTTCAAGGATCTAACTATTG
TTGGTCTTGTTGGTCATCTAGAAATGGTCTTTTATTTAGTCCAAGGTTGT
TTACAAAGACTTAAAACAGCCTGGTATTATATATAGACTTAAACTAAAAC
TTTAATTCAAGGATGAATAGACTCGCCGATACGTCATTGGTCTTATTTTT
AGCCTCTGTCCGACGATCTCATTACTAGGAATAGTTTAAATTATTTTACC
CTTTCTTTTTgacattatatattttttcgttttataGTTGGAAATTATTT
ATATATCTTGAGTACTAAGGTCGGTCAGAGAAAGTGTTTTTTTATACTGA
AAACTATTTGTGAATAATCCCTAAATGAAATCATTGAATGAGAAAAATTA
GATAGAATTAAttttaatatgaaaatatttagattCTTACCTTATTTTCA
AACCCTTGGCTAACTTTCAAG Coding sequence (CDS) from alignment at scaffold_466:236443..246613+ >TCONS_00067188 ID=TCONS_00067188|Name=TCONS_00067188|organism=Clytia hemisphaerica|type=CDS|length=2478bp|location=Sequence derived from alignment at scaffold_466:236443..246613+ (Clytia hemisphaerica)
ATGGTGGGTCAAGCATTTACCGATGATGTCATCAATCCTGGCCGCTCGTG
TCCGGATTTGACCACAACCGTGGAAATGTCCGAGGTTAGTGACGTCATCC
AAACACTAACGGATTCAGATAAAATTGTCACTTCTGGCTCTATAACGCCG
CACTCAAATGGGACAGTGGCAAAAAAGAGGCCGGACTTGGCGTTAGATTT
GAGTGATATTAGTTTTACGGAACCAACTCCCGGGCAGAAATGTTTCGGTG
AAAAATCAGATGTGGAACGAGTGTTAGACAGTCGTTGTCCTTGTTTACAA
TCGAAATGTCTTCATTTATCTGGAACTTTCTTATTAATAGCAATTGTTGG
TATTGttgttatatttttctttcgacGCTACCTTAAAGACTGTATGCAAT
GGCTTGAAAACGCCGATGGATGGGTCAGCGGTCTATTGTTTATACTAATG
TTTACACTTGTATCGTTCCCAATGACGTGGGGTTATATCTTCTTAAACGT
GGCTGCGGGTTATTTGTATGGCTTTCTAATGGGTTTAGTCACCGTAAACG
TATCAGTTTTGGTCGGAGTTGCAGTCTCCCTTGTCGTCTGCCGTAAAATT
ATCCGTGGATTTGTGACGTCAAAATTACAATCAGAACATTTGAAAGCTAT
CATAAAAGTGGTGGAAAGTCGACGTGGTTTCAAAGTTCTTGTGCTAACCC
GTTTGACACCTATCCCGTTTGGATTGCAAAACGGTTTATTTGCTATCACC
AATATGCCGTTATCCAAATGTCTGCTCGGTTCATTTATCGGTTTATTACC
CACTCAAGCATTAAATGCGTATCTTGGATCGACATTACGTTCAATGGAAG
ATGTAGTACACAGTAACTCGGCTGGTGGTTATCTTATATTAGGTGTACAA
GTTGGTATAAGTGGATTTTTGATGTGGTATGTGATACGACGTGCTAGATA
CGAACTTAACAAAGCGTGTTTACCAAACGAAAACGAATTTGATTATTCAT
CTTTAACGAACTTTACATCATCTTCGAGTAAAGATAAAATTACAGTAAGG
ACTCCACAACCTTTACCGCTGACTAGGGCGAATAGTGGTAAAGGTTTTCG
GTACTCGGCATTACCGACTTCCGACGATGATGACGTTACCATTAAAGGAC
AGAAAAATACTGCCAAGAAACAGGGCCATAAAAGGGCGCATTCCGCCTCG
GCTATATTATACGCTCTACAGAATCGAGATGACGATTAGATGGTGGGTCA
AGCATTTACCGATGATGTCATCAATCCTGGCCGCTCGTGTCCGGATTTGA
CCACAACCGTGGAAATGTCCGAGGTTAGTGACGTCATCCAAACACTAACG
GATTCAGATAAAATTGTCACTTCTGGCTCTATAACGCCGCACTCAAATGG
GACAGTGGCAAAAAAGAGGCCGGACTTGGCGTTAGATTTGAGTGATATTA
GTTTTACGGAACCAACTCCCGGGCAGAAATGTTTCGGTGAAAAATCAGAT
GTGGAACGAGTGTTAGACAGTCGTTGTCCTTGTTTACAATCGAAATGTCT
TCATTTATCTGGAACTTTCTTATTAATAGCAATTGTTGGTATTGttgtta
tatttttctttcgacGCTACCTTAAAGACTGTATGCAATGGCTTGAAAAC
GCCGATGGATGGGTCAGCGGTCTATTGTTTATACTAATGTTTACACTTGT
ATCGTTCCCAATGACGTGGGGTTATATCTTCTTAAACGTGGCTGCGGGTT
ATTTGTATGGCTTTCTAATGGGTTTAGTCACCGTAAACGTATCAGTTTTG
GTCGGAGTTGCAGTCTCCCTTGTCGTCTGCCGTAAAATTATCCGTGGATT
TGTGACGTCAAAATTACAATCAGAACATTTGAAAGCTATCATAAAAGTGG
TGGAAAGTCGACGTGGTTTCAAAGTTCTTGTGCTAACCCGTTTGACACCT
ATCCCGTTTGGATTGCAAAACGGTTTATTTGCTATCACCAATATGCCGTT
ATCCAAATGTCTGCTCGGTTCATTTATCGGTTTATTACCCACTCAAGCAT
TAAATGCGTATCTTGGATCGACATTACGTTCAATGGAAGATGTAGTACAC
AGTAACTCGGCTGGTGGTTATCTTATATTAGGTGTACAAGTTGGTATAAG
TGGATTTTTGATGTGGTATGTGATACGACGTGCTAGATACGAACTTAACA
AAGCGTGTTTACCAAACGAAAACGAATTTGATTATTCATCTTTAACGAAC
TTTACATCATCTTCGAGTAAAGATAAAATTACAGTAAGGACTCCACAACC
TTTACCGCTGACTAGGGCGAATAGTGGTAAAGGTTTTCGGTACTCGGCAT
TACCGACTTCCGACGATGATGACGTTACCATTAAAGGACAGAAAAATACT
GCCAAGAAACAGGGCCATAAAAGGGCGCATTCCGCCTCGGCTATATTATA
CGCTCTACAGAATCGAGATGACGATTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00067188-exon-scaffold_466-1491911889:236443..236488 | TCONS_00067188-exon-scaffold_466-1491911889:236443..236488 | Clytia hemisphaerica | exon |
| TCONS_00067188-exon-scaffold_466-1510915933:236443..236488 | TCONS_00067188-exon-scaffold_466-1510915933:236443..236488 | Clytia hemisphaerica | exon |
| TCONS_00067188-exon-scaffold_466-1575043694:236443..236488 | TCONS_00067188-exon-scaffold_466-1575043694:236443..236488 | Clytia hemisphaerica | exon |
| TCONS_00067188-exon-scaffold_466-1491911889:243235..244040 | TCONS_00067188-exon-scaffold_466-1491911889:243235..244040 | Clytia hemisphaerica | exon |
| TCONS_00067188-exon-scaffold_466-1510915933:243235..244040 | TCONS_00067188-exon-scaffold_466-1510915933:243235..244040 | Clytia hemisphaerica | exon |
| TCONS_00067188-exon-scaffold_466-1575043694:243235..244040 | TCONS_00067188-exon-scaffold_466-1575043694:243235..244040 | Clytia hemisphaerica | exon |
| TCONS_00067188-exon-scaffold_466-1491911889:245441..246613 | TCONS_00067188-exon-scaffold_466-1491911889:245441..246613 | Clytia hemisphaerica | exon |
| TCONS_00067188-exon-scaffold_466-1510915933:245441..246613 | TCONS_00067188-exon-scaffold_466-1510915933:245441..246613 | Clytia hemisphaerica | exon |
| TCONS_00067188-exon-scaffold_466-1575043694:245441..246613 | TCONS_00067188-exon-scaffold_466-1575043694:245441..246613 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_466 | supercontig | scaffold_466:236443..246613 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR032816 | SNARE_assoc |
Blast
BLAST of TCONS_00067188 vs. Swiss-Prot (Human)
Match: TMM64 (Transmembrane protein 64 OS=Homo sapiens GN=TMEM64 PE=2 SV=2) HSP 1 Score: 200.675 bits (509), Expect = 3.687e-57 Identity = 113/241 (46.89%), Postives = 161/241 (66.80%), Query Frame = 1
Query: 385 DSRCPCLQSKCLHLSGTFL-LIAXXXXXXXXXXRRYLKDCMQWLENADGWVSGLLFILMFTLVSFPMTWGYIFLNVAAGYLYGFLMXXXXXXXXXXXXXXXXXXXCRKIIRGFVTSKLQS-EHLKAIIKVVESRRGFKVLVLTRLTPIPFGLQNGLFAITNMPLSKCLLGSFIGLLPTQALNAYLGSTLRSMEDVVHSNSAGGYLILGVQVGISGFLMWYVIRRARYELNKACLPNENEFD 1101
+ RC CL S C S + ++A + + RRYL + W+E+ D + LLF++ F +VSFP WGYI LNVAAGYLYGF++G+ + V VL+G ++ VVC++++ +V +++QS E L A+I+VVE G KV+ L RLTPIPFGLQN +F+IT++ L L+ S +GLLPTQ LN+YLG+TLR+MEDV+ S GY + +Q+ IS LM+YV+ RA+ ELN A + E E
Sbjct: 108 NWRCCCLGSTCWCRSLVLVCVLAALCFASLALVRRYLHHLLLWVESLDSLLGVLLFVVGFIVVSFPCGWGYIVLNVAAGYLYGFVLGMGLMMVGVLIGTFIAHVVCKRLLTAWVAARIQSSEKLSAVIRVVEGGSGLKVVALARLTPIPFGLQNAVFSITDLSLPNYLMASSVGLLPTQLLNSYLGTTLRTMEDVIAEQSVSGYFVFCLQIIISIGLMFYVVHRAQVELNAAIVACEMELK 348
The following BLAST results are available for this feature:
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