TCONS_00067188-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00067188-protein
Unique Name	TCONS_00067188-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	412

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00067188-protein ID=TCONS_00067188-protein|Name=TCONS_00067188-protein|organism=Clytia hemisphaerica|type=polypeptide|length=412bp
MVGQAFTDDVINPGRSCPDLTTTVEMSEVSDVIQTLTDSDKIVTSGSITP
HSNGTVAKKRPDLALDLSDISFTEPTPGQKCFGEKSDVERVLDSRCPCLQ
SKCLHLSGTFLLIAIVGIVVIFFFRRYLKDCMQWLENADGWVSGLLFILM
FTLVSFPMTWGYIFLNVAAGYLYGFLMGLVTVNVSVLVGVAVSLVVCRKI
IRGFVTSKLQSEHLKAIIKVVESRRGFKVLVLTRLTPIPFGLQNGLFAIT
NMPLSKCLLGSFIGLLPTQALNAYLGSTLRSMEDVVHSNSAGGYLILGVQ
VGISGFLMWYVIRRARYELNKACLPNENEFDYSSLTNFTSSSSKDKITVR
TPQPLPLTRANSGKGFRYSALPTSDDDDVTIKGQKNTAKKQGHKRAHSAS
AILYALQNRDDD

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_041975	XLOC_041975	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00067188	TCONS_00067188	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR032816	SNARE_assoc

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01

ZOOM

x 1

POSITION

0


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR032816	SNARE associated Golgi protein	PFAM	PF09335	SNARE_assoc	coord: 163..277 e-value: 6.8E-18 score: 65.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 361..397

Blast

[Close]

BLAST of TCONS_00067188-protein vs. Swiss-Prot (Human)
Match: TMM64 (Transmembrane protein 64 OS=Homo sapiens GN=TMEM64 PE=2 SV=2)

HSP 1 Score: 218.394 bits (555), Expect = 2.171e-67
Identity = 119/263 (45.25%), Postives = 171/263 (65.02%), Query Frame = 0

Query:   93 DSRCPCLQSKCLHLSGTFL-LIAIVGIVVIFFFRRYLKDCMQWLENADGWVSGLLFILMFTLVSFPMTWGYIFLNVAAGYLYGFLMGLVTVNVSVLVGVAVSLVVCRKIIRGFVTSKLQS-EHLKAIIKVVESRRGFKVLVLTRLTPIPFGLQNGLFAITNMPLSKCLLGSFIGLLPTQALNAYLGSTLRSMEDVVHSNSAGGYLILGVQVGISGFLMWYVIRRARYELNKACLPNENEFDYSSLT----NFTSSSSKDKITV 349
            + RC CL S C   S   + ++A +    +   RRYL   + W+E+ D  +  LLF++ F +VSFP  WGYI LNVAAGYLYGF++G+  + V VL+G  ++ VVC++++  +V +++QS E L A+I+VVE   G KV+ L RLTPIPFGLQN +F+IT++ L   L+ S +GLLPTQ LN+YLG+TLR+MEDV+   S  GY +  +Q+ IS  LM+YV+ RA+ ELN A +  E E   S +     N + SS  +K T+
Sbjct:  108 NWRCCCLGSTCWCRSLVLVCVLAALCFASLALVRRYLHHLLLWVESLDSLLGVLLFVVGFIVVSFPCGWGYIVLNVAAGYLYGFVLGMGLMMVGVLIGTFIAHVVCKRLLTAWVAARIQSSEKLSAVIRVVEGGSGLKVVALARLTPIPFGLQNAVFSITDLSLPNYLMASSVGLLPTQLLNSYLGTTLRTMEDVIAEQSVSGYFVFCLQIIISIGLMFYVVHRAQVELNAAIVACEMELKSSLVKGNQPNTSGSSFYNKRTL 370

The following BLAST results are available for this feature:

BLAST of TCONS_00067188-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00067188-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1

ZOOM

x 1

POSITION

0


Match Name	E-value	Identity	Description
TMM64	2.171e-67	45.25	Transmembrane protein 64 OS=Homo sapiens GN=TMEM64...	[more]

You are here

TCONS_00067188-protein (polypeptide) - C. hemisphaerica

ZOOM

x 1

POSITION

0

ZOOM

x 1

POSITION

0