TCONS_00067188-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00067188-protein
Unique NameTCONS_00067188-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length412

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00067188-protein ID=TCONS_00067188-protein|Name=TCONS_00067188-protein|organism=Clytia hemisphaerica|type=polypeptide|length=412bp
MVGQAFTDDVINPGRSCPDLTTTVEMSEVSDVIQTLTDSDKIVTSGSITP
HSNGTVAKKRPDLALDLSDISFTEPTPGQKCFGEKSDVERVLDSRCPCLQ
SKCLHLSGTFLLIAIVGIVVIFFFRRYLKDCMQWLENADGWVSGLLFILM
FTLVSFPMTWGYIFLNVAAGYLYGFLMGLVTVNVSVLVGVAVSLVVCRKI
IRGFVTSKLQSEHLKAIIKVVESRRGFKVLVLTRLTPIPFGLQNGLFAIT
NMPLSKCLLGSFIGLLPTQALNAYLGSTLRSMEDVVHSNSAGGYLILGVQ
VGISGFLMWYVIRRARYELNKACLPNENEFDYSSLTNFTSSSSKDKITVR
TPQPLPLTRANSGKGFRYSALPTSDDDDVTIKGQKNTAKKQGHKRAHSAS
AILYALQNRDDD
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_041975XLOC_041975Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00067188TCONS_00067188Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032816SNARE_assoc
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032816SNARE associated Golgi proteinPFAMPF09335SNARE_assoccoord: 163..277
e-value: 6.8E-18
score: 65.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 361..397

Blast
[Close]
BLAST of TCONS_00067188-protein vs. Swiss-Prot (Human)
Match: TMM64 (Transmembrane protein 64 OS=Homo sapiens GN=TMEM64 PE=2 SV=2)

HSP 1 Score: 218.394 bits (555), Expect = 2.171e-67
Identity = 119/263 (45.25%), Postives = 171/263 (65.02%), Query Frame = 0 
Query:   93 DSRCPCLQSKCLHLSGTFL-LIAIVGIVVIFFFRRYLKDCMQWLENADGWVSGLLFILMFTLVSFPMTWGYIFLNVAAGYLYGFLMGLVTVNVSVLVGVAVSLVVCRKIIRGFVTSKLQS-EHLKAIIKVVESRRGFKVLVLTRLTPIPFGLQNGLFAITNMPLSKCLLGSFIGLLPTQALNAYLGSTLRSMEDVVHSNSAGGYLILGVQVGISGFLMWYVIRRARYELNKACLPNENEFDYSSLT----NFTSSSSKDKITV 349
            + RC CL S C   S   + ++A +    +   RRYL   + W+E+ D  +  LLF++ F +VSFP  WGYI LNVAAGYLYGF++G+  + V VL+G  ++ VVC++++  +V +++QS E L A+I+VVE   G KV+ L RLTPIPFGLQN +F+IT++ L   L+ S +GLLPTQ LN+YLG+TLR+MEDV+   S  GY +  +Q+ IS  LM+YV+ RA+ ELN A +  E E   S +     N + SS  +K T+
Sbjct:  108 NWRCCCLGSTCWCRSLVLVCVLAALCFASLALVRRYLHHLLLWVESLDSLLGVLLFVVGFIVVSFPCGWGYIVLNVAAGYLYGFVLGMGLMMVGVLIGTFIAHVVCKRLLTAWVAARIQSSEKLSAVIRVVEGGSGLKVVALARLTPIPFGLQNAVFSITDLSLPNYLMASSVGLLPTQLLNSYLGTTLRTMEDVIAEQSVSGYFVFCLQIIISIGLMFYVVHRAQVELNAAIVACEMELKSSLVKGNQPNTSGSSFYNKRTL 370
The following BLAST results are available for this feature:
BLAST of TCONS_00067188-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TMM642.171e-6745.25Transmembrane protein 64 OS=Homo sapiens GN=TMEM64... [more]
back to top