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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00067171 ID=TCONS_00067171|Name=TCONS_00067171|organism=Clytia hemisphaerica|type=transcript|length=843bp
GTTTCCAGTTGTTGACTTGACAGCTcgaagttgaaagtgtgaataGAGCC
TAACCAACAAGCTCTCTGTTGATGTGTTGACTTGACAGCTAGAGTCGAAG
CAGTTGTACCGACGTGCAAGCAGCGGTCTGTACCAAGGTAACGTAAGCTT
GACTCGAGCTGAAAACACCAAATTGTTTCCAGTTGTTGACTTGACAGCTc
gaagttgaaagtgtgaataGAGCCTAACCAACAAGCTCTCTGTTGATATG
TTGACTTGACAGCTAGAGTCGAAGCAGTTGTACCGACGTGCAAGCAGCGG
ACTGTACCAAGGTAACGTTAGCTTGACTCGAACTGAAAACACCAGATTGT
TTCCAGTTGTTGACTTGACAGCTAGAGTCGAAGCAGTTGTACCGACGTGC
AAGCAGCGGACTGTACCAAGGTAACGTTAGCTTGACTCGAACTGAAAACA
CCAGATTGTTTCCAGTTGTTGACTTGACAGCTCGAAGTTGAGGTGTGAAT
AGAGCCTAACCAACAAGCTCTCTGTTGATGTGTTGACTTGACAGCTAGAG
TCGAAGCAGTTGTACCGACGTGCAAGCAGCGGTCTGTACCAAGGTAACGT
TAGCTTGACTCGAACTGAAAACACCGGATTGTTTCCAGTTGTTGACTTGA
CAGCTCGAAGTTGAGGTGTGAATAGAGCCTAACCAACAAGCTCTCTGTTG
ATGTGTTGACTTGACAGCTAGAGTTGAAGCAGTTGTACCGACGTGCAAGC
AGCGGTCTGTACCAAGGTAACGTTAGCTTGACTCGAACTGAAAACACCAG
ATTGTTTCCAGTTGTTGACTTGACAGCTCGAAGTTGAGGTGTG Run BLAST on NCBI transcript from alignment at scaffold_466:43789..44954+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00067171 ID=TCONS_00067171|Name=TCONS_00067171|organism=Clytia hemisphaerica|type=transcript|length=1166bp|location=Sequence derived from alignment at scaffold_466:43789..44954+ (Clytia hemisphaerica)
GTTTCCAGTTGTTGACTTGACAGCTcgaagttgaaagtgtgaataGAGCC
TAACCAACAAGCTCTCTGTTGATGTGTTGACTTGACAGCTAGAGTCGAAG
CAGTTGTACCGACGTGCAAGCAGCGGTCTGTACCAAGGTAACGTAAGCTT
GACTCGAGCTGAAAACACCAAATTGTTTCCAGTTGTTGACTTGACAGCTc
gaagttgaaagtgtgaataGAGCCTAACCAACAAGCTCTCTGTTGATATG
TTGACTTGACAGCTAGAGTCGAAGCAGTTGTACCGACGTGCAAGCAGCGG
ACTGTACCAAGGTAACGTTAGCTTGACTCGAACTGAAAACACCAGATTGT
TTCCAGTTGTTGACTTGACAGCTAGAGTCGAAGCAGTTGTACCGACGTGC
AAGCAGCGGACTGTACCAAGGTAACGTTAGCTTGACTCGAACTGAAAACA
CCAGATTGTTTCCAGTTGTTGACTTGACAGCTCGAAGTTGAGGTGTGAAT
AGAGCCTAACCAACAAGCTCTTTGTTGATGTGTTGACTTGAAAGCTAGAG
TCGAAGCGGTTGTACCGGCGTGCAAGCAGCGCTCTGTACCAAGGTAACGT
TAGCTTGACTCGAACTGAAAACACCAGATTGTTTCCAGTTGTTGACTTGA
CAGCTCGAAGTTGAGGTGTGAATAGAGCCTAACCAACAAGCTCTCTGTTG
ATATGTTGACTTGACAGCTAGAGTCGGAGCGGTCTGTACCAAGGTAACGT
TAGCTTGACTCGAACTGAAAACACCAGATTGTTTCCAGTTGTTGCCTTGA
CAGCTCGAAGTCGAGGTGTGAATAGAGCCTAACCAACAAGCTCTCTGTTG
ATGTGTTGACTTGACAGCTAGAGTCGAAGCAGTTGTACCGACGTGCAAGC
AGCGGTCTGTACCAAGGTAACGTTAGCTTGACTCGAACTGAAAACACCGG
ATTGTTTCCAGTTGTTGACTTGACAGCTCGAAGTTGAGGTGTGAATAGAG
CCTAACCAACAAGCTCTCTGTTGATGTGTTGACTTGACAGCTAGAGTTGA
AGCAGTTGTACCGACGTGCAAGCAGCGGTCTGTACCAAGGTAACGTTAGC
TTGACTCGAACTGAAAACACCAGATTGTTTCCAGTTGTTGACTTGACAGC
TCGAAGTTGAGGTGTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00067171-exon-scaffold_466-1491911889:43789..44280 | TCONS_00067171-exon-scaffold_466-1491911889:43789..44280 | Clytia hemisphaerica | exon |
| TCONS_00067171-exon-scaffold_466-1510915933:43789..44280 | TCONS_00067171-exon-scaffold_466-1510915933:43789..44280 | Clytia hemisphaerica | exon |
| TCONS_00067171-exon-scaffold_466-1575043694:43789..44280 | TCONS_00067171-exon-scaffold_466-1575043694:43789..44280 | Clytia hemisphaerica | exon |
| TCONS_00067171-exon-scaffold_466-1491911889:44604..44954 | TCONS_00067171-exon-scaffold_466-1491911889:44604..44954 | Clytia hemisphaerica | exon |
| TCONS_00067171-exon-scaffold_466-1510915933:44604..44954 | TCONS_00067171-exon-scaffold_466-1510915933:44604..44954 | Clytia hemisphaerica | exon |
| TCONS_00067171-exon-scaffold_466-1575043694:44604..44954 | TCONS_00067171-exon-scaffold_466-1575043694:44604..44954 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_466 | supercontig | scaffold_466:43789..44954 + |
Blast
The following BLAST results are available for this feature:
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