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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00067164 ID=TCONS_00067164|Name=TCONS_00067164|organism=Clytia hemisphaerica|type=transcript|length=860bp
NTGTCTGTCATAGGATTCTTTCTTTTGGTAAGACGATCGGTTGTTGTACT
TCTTTATTTTTCCACCAACTTTGTTGGTaatatcaatacttttcaagACT
TTCGATACATTTTCACCGAATAGTTTTGAATTTGAGGATTTAGTTTGTGT
CGTCAAGCATTTGAATTCTGGTTTCAACACAGAAACGGCATGTTTTTTCC
TGATGTCAGAAATGTCAGTGTTTACACGGCCAAGTAAGGCCACAATGTCA
ATCCCCACTTGGTAAATCTGTTGTTGGGTCAATTTTTCAGGTGAGGTTGT
CGTTGACACAGCAGCATCTACTAAAGTTAATGCTCCACAAACTGCAGTCC
TGAGTGCTTTTTGTATGCCTTTATATCTCCTGTCATTCTTCTTTTGGAAA
GACGAAAGCAGTTTGTTAATCTCCTCATTCATATCCAAAATGGTTAGTTT
CTGACAATTTTTTGGGACTACATATTTCTCCATGAGTGGTTTAAGTTTGT
CAACAGTTTTGGAGTTACTCCATTGTTTATCTATTATCGACCGCCTGAAG
GCGGTTTTTTACCGTCGTGTTTTTGTTTTACCGAGTCGGGAGGTTGAaag
ttgaaatcgaaagtgaaatcgtgTAGCTTaagctaccatctttaattttc
atttttggtggCTGAATATTAGGGAGATAACCACGCAAATATCTAAGAGA
TATCCCGCGTGTACGGTGGCCCAGAGAGGTATGGGTGGATGATACGGTGG
CTTAGAAAGTCCAGCGTGTTAATAGCTAGGATGCAAGTGTTTTGATTTCA
GAGGTAGTCTTTGTTTTTAGATGTACTTATTGGAGTAATTTTGAATTATA
ACTTTTCTCG Run BLAST on NCBI protein sequence of TCONS_00067164-protein >TCONS_00067164-protein ID=TCONS_00067164-protein|Name=TCONS_00067164-protein|organism=Clytia hemisphaerica|type=polypeptide|length=161bp
MEKYVVPKNCQKLTILDMNEEINKLLSSFQKKNDRRYKGIQKALRTAVCG
ALTLVDAAVSTTTSPEKLTQQQIYQVGIDIVALLGRVNTDISDIRKKHAV
SVLKPEFKCLTTQTKSSNSKLFGENVSKVLKSIDITNKVGGKIKKYNNRS
SYQKKESYDRX Run BLAST on NCBI transcript from alignment at scaffold_464:165934..166793 Legend: exonfive_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00067164 ID=TCONS_00067164|Name=TCONS_00067164|organism=Clytia hemisphaerica|type=transcript|length=860bp|location=Sequence derived from alignment at scaffold_464:165934..166793 (Clytia hemisphaerica)
CGAGAAAAGTTATAATTCAAAATTACTCCAATAAGTACATCTAAAAACAA
AGACTACCTCTGAAATCAAAACACTTGCATCCTAGCTATTAACACGCTGG
ACTTTCTAAGCCACCGTATCATCCACCCATACCTCTCTGGGCCACCGTAC
ACGCGGGATATCTCTTAGATATTTGCGTGGTTATCTCCCTAATATTCAGc
caccaaaaatgaaaattaaagatggtagcttAAGCTAcacgatttcactt
tcgatttcaacttTCAACCTCCCGACTCGGTAAAACAAAAACACGACGGT
AAAAAACCGCCTTCAGGCGGTCGATAATAGATAAACAATGGAGTAACTCC
AAAACTGTTGACAAACTTAAACCACTCATGGAGAAATATGTAGTCCCAAA
AAATTGTCAGAAACTAACCATTTTGGATATGAATGAGGAGATTAACAAAC
TGCTTTCGTCTTTCCAAAAGAAGAATGACAGGAGATATAAAGGCATACAA
AAAGCACTCAGGACTGCAGTTTGTGGAGCATTAACTTTAGTAGATGCTGC
TGTGTCAACGACAACCTCACCTGAAAAATTGACCCAACAACAGATTTACC
AAGTGGGGATTGACATTGTGGCCTTACTTGGCCGTGTAAACACTGACATT
TCTGACATCAGGAAAAAACATGCCGTTTCTGTGTTGAAACCAGAATTCAA
ATGCTTGACGACACAAACTAAATCCTCAAATTCAAAACTATTCGGTGAAA
ATGTATCGAAAGTcttgaaaagtattgatattACCAACAAAGTTGGTGGA
AAAATAAAGAAGTACAACAACCGATCGTCTTACCAAAAGAAAGAATCCTA
TGACAGACAN Coding sequence (CDS) from alignment at scaffold_464:165934..166793 >TCONS_00067164 ID=TCONS_00067164|Name=TCONS_00067164|organism=Clytia hemisphaerica|type=CDS|length=483bp|location=Sequence derived from alignment at scaffold_464:165934..166793 (Clytia hemisphaerica)
ATGGAGAAATATGTAGTCCCAAAAAATTGTCAGAAACTAACCATTTTGGA
TATGAATGAGGAGATTAACAAACTGCTTTCGTCTTTCCAAAAGAAGAATG
ACAGGAGATATAAAGGCATACAAAAAGCACTCAGGACTGCAGTTTGTGGA
GCATTAACTTTAGTAGATGCTGCTGTGTCAACGACAACCTCACCTGAAAA
ATTGACCCAACAACAGATTTACCAAGTGGGGATTGACATTGTGGCCTTAC
TTGGCCGTGTAAACACTGACATTTCTGACATCAGGAAAAAACATGCCGTT
TCTGTGTTGAAACCAGAATTCAAATGCTTGACGACACAAACTAAATCCTC
AAATTCAAAACTATTCGGTGAAAATGTATCGAAAGTcttgaaaagtattg
atattACCAACAAAGTTGGTGGAAAAATAAAGAAGTACAACAACCGATCG
TCTTACCAAAAGAAAGAATCCTATGACAGACAN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00067164-exon-scaffold_464-1491911889:165934..166793 | TCONS_00067164-exon-scaffold_464-1491911889:165934..166793 | Clytia hemisphaerica | exon |
| TCONS_00067164-exon-scaffold_464-1510915933:165934..166793 | TCONS_00067164-exon-scaffold_464-1510915933:165934..166793 | Clytia hemisphaerica | exon |
| TCONS_00067164-exon-scaffold_464-1575043694:165934..166793 | TCONS_00067164-exon-scaffold_464-1575043694:165934..166793 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_464 | supercontig | scaffold_464:165934..166793 . |
Blast
The following BLAST results are available for this feature:
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