TCONS_00067158 (transcript) - C. hemisphaerica

Overview
NameTCONS_00067158
Unique NameTCONS_00067158
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2427

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00067158 ID=TCONS_00067158|Name=TCONS_00067158|organism=Clytia hemisphaerica|type=transcript|length=2427bp
TGGGTATTTGATAAGATTAccgaaattatgaaattgtaacactcgttttt
gttttcttcaacTATAATGTGGAGCAACGTAGACATTTTTCGCGCGCGAT
TCGCTTTTTATACCAAAATGGTAGGCAAAGTAGCGGTGTTCATGCAAGAG
CACCAGATTCTCAAAGAAAGATATAGCATGCACATGGAACATTTTAGCCT
GGCCTTGTGatttaatttgatttaattgtttttttacttattGAATTTTA
ATTGGTGATTGGATACATAGTATGTAATGTCAGAAGTTGAGGATAGACAA
ACTCTTCTCCAAAAGCTGTTAAAGAAACTTCCTTTTCCTGCTTGGGTTTT
TTTGCTCATTATTTTTGGACCCATTCTCCCTGTTGTTGTTCTCATTGTTT
ATTGTATTGATTGGTATTGCCAGTGTATGCTTATGCCTTGCAATCAAGAA
GTTATTGAAGTGgatgaaaaagataaagaagATTGATTTCATTGTGTTAT
TGTAACATCAACATAATATTAATGATGTCATCAACAATGAACTCGTGCTA
CAAGGACACCAAATTGGTTGTCATTCTGGGTAGTACGGCGGTTGGCAAAA
CAAAGTTAAGCATCGAATTGGCAAAAATGTTTGATGGGGAGATTATTAGT
GCAGATTCTATGCAGGTATACAAAGGTCTTGATATTATCACAAACAAAGT
GACACCAGAGGAGAAACAATGCATACCCCATCACATGATTGATATCTTTG
ACTCCACCCAAGAGTTCACCGTCATTGATTTCAAGCAACGAGCATTGAAA
GTCATCACAGATCTGGTAAAGAGACAGAAAGTTCCTATCATCGTTGGAGG
gacaaattatttcattgaagCATTATTATGGGATTTCTTGATCGAAGGAG
GGTTGGATGATGTGGATCCAAAGAAAGAGCTTCGAAATCGAAAAGCATTT
TTATTTCCCGGTTCAAAACGAAGACACGGTGATAAGAATGAGGTGGATGA
CGAAGAATCCGATCAAAGAGttgaTAACAGAGATGTTATAGCAGAGACAG
CGTTATATGATGAACTGATGAAGGTTGATCCAGAACGAGCCAATCAATTG
CATCCAAACAATCTACGAAAAATATCCAGAAGTTTGCAGATTTACCACAC
AACCGGGGAAACGCATTCAAGTttaatgaaaaaacaacaagatcAACCAG
GCTCAAGTGGTCCTTTAAGGTTTCCGAAAACTTTGCTACTATGGTTAACA
GCTGACCAAACAATCTTAAACGATCGAATATCAACACGAGTTGACCAAAT
GCTTGAAAAGGGACTTGAAaacgaaatcaaaacattttatgaaaaacatt
taaaagcgAATGAAGATTCGAATGTTGAGACTAAAGAACCGGACTCCGAC
TTGCAAATAATATCATGCGTTGATAGCTCTACAAATGTGGAGTTGACGGA
GAAAGATTCACCGTTAGAAACCCAGACAAATTCTACAAAGAGTGACTTAT
TATCGAAGCCTGGAAAAAGCGAAACTAGTATGACAGGTGATTCAAAAAAC
AATGTCTTACCAGAATCTAATAAAGGAGAAAATAGCGTAGACGGTGTTAA
AGAATATCAAGAAAAATCTGAAGACGTTTTACTGAAATCGTATGAGGAAG
GCATTTTTCAGGCTATCGGCTTTAAAGAGTTTCACAAATACCTGACATAC
ACTGGTATCGATGAATCTAAGAAACAAAAACTGTTACAAGCATCTCTTGA
TAAACTGAAACAAATCACGATCAAGTATTCTAAAAAACAAGTTCGCTGGG
TTATGAATCGAATAGTGAAAAGACAGGCTGTAAACACTCTACCTGTTTAT
AATCTGAACGCGTCTGACATAGCAGCTTGGGACGAGCACGTGTGTAAAAA
AGCTAAAGAGATTACGCAATGTTTTATGAAAGATGAACCTATCACACACG
CGCCGATGGCAATTTCGGACATTGATGAAAAGGTTACGGTAACCGATAAA
CATCGAAAACACGTTTGCGATGATTGTAATGGACGTATTATCATAGGGGA
TGACGCTTGGGAAATACATTTAAAGTCTAAGAGACATCGAAAAATGAAAG
TAAACAGAGCGAAGAAAATGCAAGTGTCAGCACAAACTTGATTGAACCAT
TTTTAGCGGATTTCTTTCGGAggaaattttttaatctttcGGAAAAATTT
GTTGGTCAGAAATGACTAGTGAAATGAACACTTGTTGGAAACTCAAAACT
GGATTTTCTTATAATTAATACTGGGTCATACTAAgagttagttcatctaa
tgtttccagctcacccaaatagagacttatacgcCTGCGTAattttgcgt
tcttttaaaccacatatAGAGGAAGAGGAATGAATTTGtaggtggtacag
tcactttcggtcgcggttgtggatggc
Run BLAST on NCBI

transcript from alignment at scaffold_464:271674..291313-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00067158 ID=TCONS_00067158|Name=TCONS_00067158|organism=Clytia hemisphaerica|type=transcript|length=19640bp|location=Sequence derived from alignment at scaffold_464:271674..291313- (Clytia hemisphaerica)
TGGGTATTTGATAAGATTACCGAAATTATGAAATTGTAACACTCGTTTTT GTTTTCTTCAACTATAATGTGGAGCAACGTAGACATTTTTCGCGCGCGAT TCGCTTTTTATACCAAAATGGTAGGCAAAGTAGCGGTGTTCATGCAAGAG CACCAGATTCTCAAAGAAAGATATAGCATGCACATGGAACATTTTAGCCT GGCCTTGTGATTTAATTTGATTTAATTGTTTTTTTACTTATTGAATTTTA ATTGGTGATTGGATACATAGTATGTAATGTCAGAAGTTGAGGATAGACAA ACTCTTCTCCAAAAGCTGTTAAAGAAACTTCCTTTTCCTGCTTGGGTTTT TTTGCTCATTATTTTTGGACCCATTCTCCCTGTTGTTGTTCTCATTGTTT ATTGTATTGATTGGTATTGCCAGGTATCTTTTATATATAATATTATATCT TACATACTAGCCGTATTGTATAAGGGTTGCGAAGCGATCCAGACTCCACC TCAATTCGCAAGTTGCTAGCAAAATAAGAGACACTCTAAAAATCCCTCTA ATAAATAAAGCCGCTATAGAAACAGGGTCGTAAGCTAAGAGCCTTAATGC CCCAAACACACCACATAATCTACAGAGGCACAACACCCGCCGCCGCCCGC CGCGCATCGCTCTTTTTTTTTCCTTCTAGTTATTCTAGTGTAAATGGTGC CTTAATCTGAGATCTCTAGCTATCAACGAGTGGGTGTGAGAACAGGACAG GTCAGCGAGAGTAGTTGAAGACATTTTTTAGACATTTGTGATTTGACATT GCGTGAGAAGGTGCACCGCTTCCCAACATATTCCTATGTATCCTAGGCTT TATTCATGTTACTTACTTTTGGTTACTTTTGGTTGTCTTCGAGCTTCATG CTCTGGCAAGAAACTTTCTGCTTCACACCACAATGCTGCATCCATCAAAC CTGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATCAGCAAAA TAATTCAGTGTGTTGAATTTTGTGCGTGGCTCTTGTTGATCGTCGTCCAG AAAGGAGTTTTGAACTTTCAGAGTTGTTGATACTAGTACAATTTCATGAT GTGATGTGCTTTGCAATACAGGTAATGTTGTGTAACTGTGTATTATTTGT TCGTTGTTAGTGAAAACAAGGTCTAATGTATTTCCATCCTTGTGTGTTGG CAAATCGATATATTGTGACATGAAGAATACGTTGCAAAACTGATTCAAAG AGTTTAGGATAAGACGGTCGTTGATAGTACATCCTGATTTTGGAAGGCCC TCAGGCCAAGTTGCTTTTGGAAGGTTGAAATCACCTCCAAAAATGATATT TGGTACGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNG ATATCCCTGTAGACGAGTTACTTCGACCAGACCGTAAACCTGAGACAAGA TTATAAAAAACTAGACGGTGAAATAGTTTACGGTCTGGATATCCAGGCTA CCTTCTACTCTGTTTGTGTGATTTCGTAGTATAGCATTTAGTCAAAACGA ATAATAATATAGAAATAACAGAGTAGCCGGGTATTTTTGTAGATGCCAAA TCTGGTCGCAGAATTCTATTGGCTGTTAAACAATTGTTGAAATCACGTCA TATTATTGTTTTCATTGGAAGTGCGCGAACCTGATTGGCTAACCTTATCA ACGGCTTTCTTGGTACGAAATTCAAACCAAATGTAAACAAATTCAAACTG GGTCAAAAATACCATACTCTCAATGAGTAGCTTCTGATGGGATTATTTCT TATGTGGTGTAAGTTTGAATAGAGAGTATGGATCTCCAGACCAAAAAGAT TGTGACAGGTATCCTAATTTGCACTTGTTCTTGACTGTACTAAACAAAAT AGAACGAAAATGGGTTAATGTAAACAAACATGCTTAGTGAATTTTTCAAT CATGATCTAATCACATGATATCATGTGGACTGACCTTTAATGAAATTGAA TTTGTCACATGAGCTATATTCGAAAGCATCACTGGTCAAAATGTCAAAAC TACCATGAGTCGGCTGATTTTTTTTAAATATGCGTGTGCGCAATTAGAGG AAGTGCACCGGAACGTTCTGGAGGTCCGGTGCAGACCAATCGCCGGAACA CTGGAAGTGCTACAGAATCTTCCAGAGCAAAAAAAAACGGCACTTTTTGA TCCGGATGTTTCCGGAGCGCTAGGAGGGTCCTCAGAGAATACTCGGTGTA GGCTGATGCAAGTTCCCCCTCTCTGATGTCAGAGGGGCAGGGAACTACTC AAAACAATTTGTCATAATAAAATCTGACAATTTGTAAAAAGAAACACAAT TTTAGCAACTCTAAAAATGCAATTTTCGGGTCACAGGGCTGGGGTTGCTG TTCTGATAGCTCATTTTCTGAAAAATTAGCTTTTACCACCTTGACTTGAT ACTTTATAATCGGAGTAAATTTTGCGAGAAAAATTCTGTGAGCAGAAAAA TTCCCAAAATATTTCTGGATTTAATTTCGCGCGTCAGAGTTTTGAAAAAT TTTGTATGGATTCAATTTTGCCTTAAAACAACTAAGAAATAACCATTTTT TGCCACAAATGGAGACTTTGGACTGGTTCCTCTGCCGAAAATGCAGTTTT AAAAATTTTGTGGTCTATTTAATCTTGTGCGTTTTTTGCAAGTTTTAATT TCCTGAAAATGGCAAAAATTTGAAATCAATCACAAAATTTAAAAATCTCA CGTAAGTTAATCCAATCAAAGTATTTCTGTCAACTGCTCTAACTTGGGAC GATTGGTTGAAACATGGGACTGGTTGATATCTGGCCTGTATTTTCACATA CTATTAAATCTCTCAAATTTGTTTTGATAACTCCACCAAGTTTATCAATA ATACTTCTTCGTTCCTCTTAGAGTGCACAGACATTCCCGCGTGTTCCACT ACAGATTTTTTTCATATTTCGATTTAAAAGCCTACTCGGTGCGAAAGAGA AATCGTGTATTTTTTAATACTCCTTTCATTAACTCAAATCAAATGTTCGG TGAAATGGTGGCAGAATTGCCGTCCCATGTTTTGTCAGATAGTCCCAAGT TAGAGCAGTTGACGGTATGCCATAGTACTGTATGCTTATTGGATCACAGG CTATTGTTTGCAATGTTTAGATTATCTAAAAGGCTTTTACATTACAAGAT AGTGAAAAAAATTGGCTAATTTCAGGGCATTTGGGTATCTGACGTTTAGT TTTTGAATTACTGTACATAATCTTACGCATTTGAAAAACAGAAAATGCCA GGTAGTATATCCCTAATCAGTTTTTGAAGTTTGCAAAAAAAAACAAATCA GCAGTAAAAAACTACAACTTATGTATTTTTCCTTTTTTTTTGCAAACTGA TGATTTGCACCACTTTCTATCAAGCTAGAATTACTTCGCATACTCTTTGC TTGAGAAAACTATTGACAAATTAAAAAAAATTTCACCCATGAGGGAGTTC GCTGGTATTCTGCGAGGTGGCTTTTTTAATTTTGCCCAATCTGCTATGTT GTATAAGACAAATCAATAAGATGACTTTATCATTAAAAAATTTACCAAAA TTATTTTTTGCAAAAACTAGGCACATTCTAGTGGCGTTCTGGAACATCGC AAGGTATAATCTTTTCAGGGTATATATATATTTCATTCAGGAAAATCGGA CTGCTGAATTCTATTGCTCCTATTGCTTTTTAGTGTATGCTTATGCCTTG CAATCAAGAAGTTATTGAAGTGGATGAAAAAGATAAAGAAGATTGATTTC ATTGTGTTATTGTAACATCAACATAATATTGTAAGTTTTGGCCGCCATCT TTGATCAAAGTTTTTTTTGATTTGGTACCTGTAAAGAAGCCATTGCAGTT TTTATGAGTATTTTTGGAGCCCCTTTGTTTTTGGCAAATTTTTAGGCACT CCCTCCGATTCGAATTTTTAATTCGTCTAAATTTCAATAACTCGGATTTT CTCTCGGAGACCCCTTTTTCTTCACCATTTCTTGGACCGTTTGTAGGTTT GTTCATGTTTGTACCTTTCTTCAAAAGAATGATGTCATCAACAATGAACT CGTGCTACAAGGACACCAAATTGGTTGTCATTCTGGGTAGTACGGCGGTT GGCAAAACAAAGTTAAGCATCGAATTGGCAAAAATGTTTGATGGGGAGAT TATTAGTGCAGATTCTATGCAGGTTGGTATAAGTTAGATATTGGTTGTTA ATAAATTAGTTTAAGTACTTTAATGTATCTCATCTTTTCAACAGCACCCT TTATTGTTTGCTATGACATTTTTCATATGAAGATTGTAACCTTTAAAATC CTTTTTTTCCCACGTAATAAATTCTGTTCCCCAAAACTTGTAGTCTGCAC ATTTTAAAAATTTACTCTTGAGGGAAAAAAATTATATGAATTAAAAGTAA TATCTCGTTAGAAAGATAATTTTGAGTGGCTTGTTGAAGTAAGCTTTGTT GAATTCTAAAGATTTGAAAATTTGAATGAAGATTCTTTCTACACGGTTAA AAACTTTATTATATACCGGGTATAGCAAAAAAAAATTCCCTCAAGTTTGT TTCTGAGACTTTGAACTCAGCTGATTTTATATATGGTTTCAGATCTGTTT GATCAAAAATCACAACCCCACGAAAGTTTAAATGGGTGATCAATTACTAA AGTTAGTCGAAATGGAATTCATAAATGCTCCAAGGTGTTTCATGTTTGAT GTTAGGCGAGACCAATTTGATTAGTTGTTTTACAGGCCCGACCGACCCCG AAATTTCAAAAATCGAAATAAAAATTAAATTAAAATTTTGGTAGTATATT TTTATTTTCATTGCTTTACAGACTGCCAAATTTTCAAATTTTGTTCGTTT TTCCAAGATTACGAGAATTCTATGTTCAATTTTATCTATGAATTCGAGCT TTTAGTGTCTTTTTGTTTTCTTTTTCGCATTTTAGTTTTTGCTGGCTTTT CGCCGACCGACGGACTCTCTTTTTTGGGTAGCAAATTTAACTGACCTCTC CTTAGAATTGAATCGTATCTCTCGATATTAGTTTATACACTCTCTTTCAG GTATACAAAGGTCTTGATATTATCACAAACAAAGTGACACCAGAGGAGAA ACAATGCATACCCCATCACATGATTGATATCTTTGACTCCACCCAAGAGT TCACCGTCATTGATTTCAAGCAACGAGCATTGAAAGTCATCACAGATCTG GTAAAGAGACAGAAAGTTCCTATCATCGTTGGAGGGACAAATTATTTCAT TGAAGCATTATTATGGGATTTCTTGATCGAAGGAGGGTTGGATGATGTGG ATCCAAAGAAAGGTATAACAAGACTGTGCGCATCCCCAGAATTTATTTTG ATATAGGGGATGTGTGTCGTGTATGAAATTACTGTCCGAAAGTTACCCCA AAAAATGAAGTCATTGCGTTGCTGCTTTCATAATTATAAATTTTCATTCA TTGAACAAAGAAAAAAAGTTGTTGTGTTGCTATGAAGCATAATCAAGAAA ATAAAGAAGAAAAGACGGGGCTAAGTTGAGACATGAATATTGTAGACGAT ACGTATCCCCTATATAAAAAACTATCAGGGGGATGCGTTCAACCTAAGGT ATAAAACAAGAGAGCTAATAATAAAGTCTGCGACTGTAATGCCGTATTAC TTCGAATAAACGCCCCTTTTTTTCNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNCCCCCCCCCCTCCGCCTCATATTCGAAGTGATACTATAGGCCATT CCAAGGTCGAAAGGAATCATCGTTAATCAGCACCACCGTGCTCTGATAAC AAATTTCTGTTGGTCTAAAAGTTTGGAAAAGTTTTTGCGTATAAACAACG GGTAGCCGTTATGGGACACAATCAGTCCTGATTAACCATGATTCATCCTG ACCATGGATTTGCCTATCCAGGGTGAACCGAAGGCTCTCTTTTCTCAGGA TTTCTCCATTTTCCCTGGACTTTTAATTGCTGAGCACACAAGAGGGGGGT ATTTAGCGCCATTTTTTTTTTTTATGACCCGGCTAGGGGTCGAACACGCA AAATTACACATCGTTGCACACCGTAGTTAAACTTTTCCTCTACCTTGCGT AATATCGTGGGTTCAAACTAAAACAGCTCCAAACATGTGAGTGAAGGTAG AGAGTCTATCACCATATTTTCGTAACACCCTACCTGGAAGAGCTTGGGAT TCGAACACAGTCCAATGCGGTGAAAGTCTGTGATCGAAACCTTCACACTA CCAATCGGCAGAATGTTAGTGAGATACAGTGATAGCCTTATCCAGCTGGT GAGTGAATGTATACCGAACTTATCGTTCTACATCTGCAATTTGAGCGTTA CTAATAAGCTCATTTTGACGTCAATCGATACTTCTCCAAACAGTTTATAC CAAAGATTTAAAAAAAAGGACATAATGCATCGCTTTTCAAATGGTCTGCC ATTAAAAATATCAATCCACATAGAAAGGTCTATTGTCCTTCTCTATCTTC GGGTAGAAAGCTATCGACAGGGCAGCCTACATGATGTGCGGCAGGAAGAA CTAAAAGTCTATTTCTAGGGCTTCGTCTTTAATATACAGTCTTGTCATTG ATAGCAGGACTTTTCTTTTACAATTTTTGATACCTGTACCTATGAGTAAA GTAAGAGACATTAATTGTTCTTCTTCTTCATATTTTATTTGTAGAGCTTC GAAATCGAAAAGCATTTTTATTTCCCGGTTCAAAACGAAGACACGGTGAT AAGAATGAGGTGGATGACGAAGAATCCGATCAAAGAGGTATGTTTGAAGT GATAATCAGATTTTATGGACCTATATATACCTTCCATGGTCCTAAACAAA GTCCCAATTTCTTTGCCAAAGGCTTAGCTAAAAAACTATAGAATTTCAGC CTGAGAACTGTGTAATAACCAAAAAATTTAAAATGGTCATATCTTGCAAT ATTGGTTAGTGGAATTAACGGAATGAAAATATTTTTCAGTTGATAACAGA GATGTTATAGCAGAGACAGCGTTATATGATGAACTGATGAAGGTTGATCC AGAACGAGCCAATCAATTGCATCCAAACAATCTACGAAAAATATCCAGAA GTTTGCAGGTTTGTATCGCTTATCCATCCGCCTCACTATGGGCTATCTAA GGGGCTACTTTCATATCAATTTTTCCCACGACGACTAACGTTATAATGAC GCGAGGGGGTGGGGGTCAGAGGCAGTGACGCTAAGAAAATCCCTTAGAAG ATTTTCGGTTTTCGGGGCTGATTCGAGCTGATTGAGTTCTAAATTTTCTA ACAGATAAACCTAATATTTTTCTAATTTGTTAACTTTACTCGCCACGCTT AGTTTCATATCTCTTTTTCGTGTCGATTTGCCAGAGACATACCAATCAAT TTTTGAAATTTCCAAAAAAGGTCGATATTTTGCTCATGTAAAAGGTGTGT GAATGGAAGGAATTACGATTTCATCGATTTTTAATGACTGACGCTAAGGG TAGGGGGTAGGGGACCTTGGAATTAGCGTCTGAATGAGTTAGTCTTTTGA AACATCGATATGTGAGTGACCCCTTATACAAAACACTAGATAGAATTACG CTATCTTTCTCAAGCTATGGTACCTTAAGTGGGTAGATTTTGGTGTGGAT TTAATTTGGCGAATAACTGAAATGCGACTTTTGGCGGGGATTTAATTTGG CGAATGCTCAATTTTGTAAAATTTGGCGGGGATTTAATTTGGCGAAAGAC AAAAAAAGTGTTTTTATTAAGGTGTTTTGTTGAAGTTTAGAATAGAAAAA ATAATACGTGTAACATAAGATCGGTTATAAAGGTAAAAATAGTTTGTTAA AATGTATACTGTTTAAAAATACAAAAATTTCTCGATAAGAAACATGATTT TCCTTTAACTTTGGCGGGGATTTAATTTGGCGAATTGCCGAATTTGGAAA TTTCGGCGAGGATTTAATTTGGCGAAATTTGGCAAAATTCCCCAAACTCG CCAAATTTAATCCCGCCAAAATTTATCCACTTAAGGTAGCTCTAGGCTAC GTCATATCTTTCTTCGTTTCGAGTGTAAAAGCCTGGAACTATCTACTGTG TGGACTATGGTAGTTAGGTTTCGACAATGTTGTTTAATGAAAACAAAAAC CTGATATGACGGGAAACTAGGAGGTTCTGATTGATCAAATTGCCTGCACC GAACTGTGATCTTCCTAAAGCTTTAAAAATGGAGCATTATTTTGATTCAG TCATACATATCTGTGGCTGATAAGTGTTTTTCGATTTCTCCTTCCAACAG ATTTACCACACAACCGGGGAAACGCATTCAAGTTTAATGAAAAAACAACA AGATCAACCAGGCTCAAGCAAGTTGAGTAAGTCTACAATGTTTATGTTTT TGAAATATGTGATATCGTTCCTGTGTAACGTAAATCACTGCGATATACGA TATGTTATGTGGTACATCTAATTGGCATTCTCGCAACTTTTTTTATCATA AGGACTACTAATTCATGATATTCATGACGTAATGTTTTCTACGGAAAGAC CCTGGTTTTTGTCTAGTTTAAATTTTCCACTACTGGCTAAAACCCGGATA TTGCTGTTGAAAACATTACGTCATGAATATAGGGGTTACGGTTTATAAAC TAATTCGAGTATGATGTCAATAAATCTCTCTCTACTTGTGTTTTTTGGTG CTAAATCTTATCGGTGAAATCCTTTGCAAAAAATATTTTGATTTTGTTTA TTTTTTGACTAATCACACCTCAAAAGCTTGGCTGTGCGATAAGAAGCTCA GTGTATTAAGGTTTTCATCCGGCATAGAGCCTGATAATGTGGGTTTTCTA AATTTAAGGCGCCTAATAAATTTGGAAGTTAGGTTTTACGAATTTCGGCC CATCAAGTAAAAGCAATTATTACAGGACTAAAGGCAACAGCCATTGCCCA TCCTTCATGTGGACCTGTCTGGAATCTTTCCGGACAGCGGAAAAAACCCT TGAAATCCGTTCCGGGCGCGAGTTTTTGTCGGTTTTTGACAAAAATTTGA GGACTTGTGGAGGACTCCCAAACCTTTCAGTCGCCAACTAACAAACATTC ACGAATAGAAGCTTTGCTATTATCACTCTCATTTATATTCTTCTCTCAAA CCACCACGTCAACCATCAGGTGGTCCTTTAAGGTTTCCGAAAACTTTGCT ACTATGGTTAACAGCTGACCAAACAATCTTAAACGATCGAATATCAACAC GAGTTGACCAAATGCTTGAAAAGGGACTTGAAAACGAAATCAAAACATTT TATGAAAAACATTTAAAAGCGAATGAAGATTCGAATGTTGAGACTAAAGA ACCGGACTCCGACTTGCAAATAATATCATGCGTTGATAGCTCTACAAATG TGGAGTTGACGGAGAAAGATTCACCGTTAGAAACCCAGACAAATTCTACA AAGAGTGACTTATTATCGAAGCCTGGAAAAAGCGAAACTAGTATGACAGG TGATTCAAAAAACAATGTCTTACCAGAATCTAATAAAGGAGAAAATAGCG TAGACGGTGTTAAAGAATATCAAGAAAAATCTGAAGACGTTTTACTGAAA TCGTATGAGGAAGGCATTTTTCAGGCTATCGGCTTTAAAGAGTTTCACAA ATACCTGACATACACTGGTATCGATGAATCTAAGAAACAAAAACTGTTAC AAGCATCTCTTGATAAACTGAAACAAATCACGATCAAGTATTCTAAAAAA CAAGTTCGCTGGGTTATGAATCGAATAGTGAAAAGACAGGCTGTAAACAC TCTACCTGTTTATAATCTGAACGCGTCTGACATAGCAGCTTGGGACGAGC ACGTGTGTAAAAAAGCTAAAGAGATTACGCAATGTTTTATGAAAGATGAA CCTATCACACACGCGCCGATGGCAATTTCGGACATTGATGAAAAGGTTAC GGTAACCGATAAACATCGAAAACACGTTTGCGATGATTGTAATGGACGTA TTATCATAGGGGATGACGCTTGGGAAATACATTTAAAGTCTAAGAGACAT CGAAAAATGAAAGTAAACAGAGCGAAGAAAATGCAAGTGTCAGCACAAAC TTGATTGAACCATTTTTAGCGGATTTCTTTCGGAGGAAATTTTTTAATCT TTCGGAAAAATTTGTTGGTCAGAAATGACTAGTGAAATGAACACTTGTTG GAAACTCAAAACTGGATTTTCTTATAATTAATACTGGGTCATACTAAGAG TTAGTTCATCTAATGTTTCCAGCTCACCCAAATAGAGACTTATACGCCTG CGTAATTTTGCGTTCTTTTAAACCACATATAGAGGAAGAGGAATGAATTT GTAGGTGGTACAGTCACTTTCGGTCGCGGTTGTGGATGGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_041956XLOC_041956Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00067158-exon-scaffold_464-1575043694:290891..291313TCONS_00067158-exon-scaffold_464-1575043694:290891..291313Clytia hemisphaericaexon
TCONS_00067158-exon-scaffold_464-1575043694:278384..278480TCONS_00067158-exon-scaffold_464-1575043694:278384..278480Clytia hemisphaericaexon
TCONS_00067158-exon-scaffold_464-1575043694:277992..278136TCONS_00067158-exon-scaffold_464-1575043694:277992..278136Clytia hemisphaericaexon
TCONS_00067158-exon-scaffold_464-1575043694:276852..277113TCONS_00067158-exon-scaffold_464-1575043694:276852..277113Clytia hemisphaericaexon
TCONS_00067158-exon-scaffold_464-1575043694:275277..275369TCONS_00067158-exon-scaffold_464-1575043694:275277..275369Clytia hemisphaericaexon
TCONS_00067158-exon-scaffold_464-1575043694:274956..275074TCONS_00067158-exon-scaffold_464-1575043694:274956..275074Clytia hemisphaericaexon
TCONS_00067158-exon-scaffold_464-1575043694:273697..273763TCONS_00067158-exon-scaffold_464-1575043694:273697..273763Clytia hemisphaericaexon
TCONS_00067158-exon-scaffold_464-1575043694:271674..272894TCONS_00067158-exon-scaffold_464-1575043694:271674..272894Clytia hemisphaericaexon
TCONS_00067158-exon-scaffold_464-1510915933:290891..291313TCONS_00067158-exon-scaffold_464-1510915933:290891..291313Clytia hemisphaericaexon
TCONS_00067158-exon-scaffold_464-1510915933:278384..278480TCONS_00067158-exon-scaffold_464-1510915933:278384..278480Clytia hemisphaericaexon
TCONS_00067158-exon-scaffold_464-1510915933:277992..278136TCONS_00067158-exon-scaffold_464-1510915933:277992..278136Clytia hemisphaericaexon
TCONS_00067158-exon-scaffold_464-1510915933:276852..277113TCONS_00067158-exon-scaffold_464-1510915933:276852..277113Clytia hemisphaericaexon
TCONS_00067158-exon-scaffold_464-1510915933:275277..275369TCONS_00067158-exon-scaffold_464-1510915933:275277..275369Clytia hemisphaericaexon
TCONS_00067158-exon-scaffold_464-1510915933:274956..275074TCONS_00067158-exon-scaffold_464-1510915933:274956..275074Clytia hemisphaericaexon
TCONS_00067158-exon-scaffold_464-1510915933:273697..273763TCONS_00067158-exon-scaffold_464-1510915933:273697..273763Clytia hemisphaericaexon
TCONS_00067158-exon-scaffold_464-1510915933:271674..272894TCONS_00067158-exon-scaffold_464-1510915933:271674..272894Clytia hemisphaericaexon
TCONS_00067158-exon-scaffold_464-1491911889:290891..291313TCONS_00067158-exon-scaffold_464-1491911889:290891..291313Clytia hemisphaericaexon
TCONS_00067158-exon-scaffold_464-1491911889:278384..278480TCONS_00067158-exon-scaffold_464-1491911889:278384..278480Clytia hemisphaericaexon
TCONS_00067158-exon-scaffold_464-1491911889:277992..278136TCONS_00067158-exon-scaffold_464-1491911889:277992..278136Clytia hemisphaericaexon
TCONS_00067158-exon-scaffold_464-1491911889:276852..277113TCONS_00067158-exon-scaffold_464-1491911889:276852..277113Clytia hemisphaericaexon
TCONS_00067158-exon-scaffold_464-1491911889:275277..275369TCONS_00067158-exon-scaffold_464-1491911889:275277..275369Clytia hemisphaericaexon
TCONS_00067158-exon-scaffold_464-1491911889:274956..275074TCONS_00067158-exon-scaffold_464-1491911889:274956..275074Clytia hemisphaericaexon
TCONS_00067158-exon-scaffold_464-1491911889:273697..273763TCONS_00067158-exon-scaffold_464-1491911889:273697..273763Clytia hemisphaericaexon
TCONS_00067158-exon-scaffold_464-1491911889:271674..272894TCONS_00067158-exon-scaffold_464-1491911889:271674..272894Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_464supercontigscaffold_464:271674..291313 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
11.3826 10.7969 5.171 3.79229 6.88774e-05 0.236452 0.0113268 0.0023924 1.53172e-06 0.479643 0.038863 0 0.000102886 3.65897e-06 3.51443 3.82281 3.56098 3.18949 0.906106 1.44616 1.6782 1.87113 10.6169 8.46033 9.19916e-10 0.00104597 1.3006 1.32813 6.47326 8.59568
Blast
BLAST of TCONS_00067158 vs. Swiss-Prot (Human)
Match: MOD5 (tRNA dimethylallyltransferase, mitochondrial OS=Homo sapiens GN=TRIT1 PE=1 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 2.778e-56
Identity = 113/287 (39.37%), Postives = 169/287 (58.89%), Query Frame = 3
Query:  525 MSSTMNSCYKDTKLVVILGSTAVGKTKLSIELAKMFDGEIISADSMQVYKGLDIITNKVTPEEKQCIPHHMIDIFDS-TQEFTVIDFKQRALKVITDLVKRQKVPIIVGGTNYFIEALLWDFLIEGGLDDVDPKKELRNRKAFLFPGSKRRHGDKNEVDDEESDQRVDNRDVIAETALYDELMKVDPERANQLHPNNLRKISRSLQIYHTTGETHSSLMKKQQ---DQPGSSGPLRFPKTLLLWLTADQTILNDRISTRVDQMLEKGLENEIKTFYEKHLKANEDSN 1373
            + S +    +   LVVILG+T  GK+ L+++L +   GEI+SADSMQVY+GLDIITNKV+ +E++   HHMI   D     +TV+DF+ RA  +I D+  R K+PI+VGGTNY+IE+LLW  L+     ++  +K + +RK                V+ E+ D  V          L+  L +VDPE A +LHP++ RK++RSLQ++  TG +HS  + +Q          GPL+F    +LWL ADQ +L++R+  RVD ML  GL  E++ F+ ++ + N   N
Sbjct:   12 VGSGLRGLQRTLPLVVILGATGTGKSTLALQLGQRLGGEIVSADSMQVYEGLDIITNKVSAQEQRICRHHMISFVDPLVTNYTVVDFRNRATALIEDIFARDKIPIVVGGTNYYIESLLWKVLVNTKPQEMGTEKVI-DRK----------------VELEKEDGLV----------LHKRLSQVDPEMAAKLHPHDKRKVARSLQVFEETGISHSEFLHRQHTEEGGGPLGGPLKFSNPCILWLHADQAVLDERLDKRVDDMLAAGLLEELRDFHRRYNQKNVSEN 271          

HSP 2 Score: 124.02 bits (310), Expect = 7.545e-30
Identity = 65/164 (39.63%), Postives = 95/164 (57.93%), Query Frame = 3
Query: 1599 KEYQEKSEDVLLKSYEEGIFQAIGFKEFHKYLTYTG-IDESKKQKLLQASLDKLKQITIKYSKKQVRWVMNRIVKRQAVNTLPVYNLNASDIAAWDEHVCKKAKEITQCFMKDEPITHAPMAISDIDEKVTVTDKHRKHVCDDCNGRIIIGDDAWEIHLKSKRH 2087
            + Y +K+     + Y+ GIFQ+IGFKEFH+YL   G        +LL+  ++ LKQ+T +Y++KQ RWV NR + R      PVY L  SD++ W+E V + A EI Q F++    T  P+ +   + +    +K   H+CD C+ RIIIGD  W  H+KSK H
Sbjct:  261 RRYNQKNVSENSQDYQHGIFQSIGFKEFHEYLITEGKCTLETSNQLLKKGIEALKQVTKRYARKQNRWVKNRFLSRPGPIVPPVYGLEVSDVSKWEESVLEPALEIVQSFIQGHKPTATPIKMPYNEAE----NKRSYHLCDLCD-RIIIGDREWAAHIKSKSH 419          
The following BLAST results are available for this feature:
BLAST of TCONS_00067158 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MOD52.778e-5639.37tRNA dimethylallyltransferase, mitochondrial OS=Ho... [more]
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