TCONS_00067153 (transcript) - C. hemisphaerica

Overview
NameTCONS_00067153
Unique NameTCONS_00067153
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length707

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00067153 ID=TCONS_00067153|Name=TCONS_00067153|organism=Clytia hemisphaerica|type=transcript|length=707bp
CCAGGACCAGGTGGTTCTGCTAAAGATATTTGTAcaaagaaataccaaaa
aataacaatttttaagATGAACGACAAAAGCGCAATCGAGAAGAATGATA
TTGGAGCTTTGACAGATGACCAACAGTCTAAATTGAATTCATTTAAAATC
AAAACTCGAATGGGGAATGAGAAATATTTGCGAGAACATCCTGAAATTGA
TTGCTTGATTTCCAGTTTTGTCAGTGAAGTGTGTATACAACGTCCAAACA
ACGTCCGAGAATTTGCAGCCGATTATTTCACAGACCCAGActtgaaattg
aaagttcaaGCGCTTGTGCAGAAGAAAGAGTCGAGCTTGAAACGAAACCA
AAACAACAGTTAGTAAGAAGGCGCATCATGGATTTTATGGGTCGATTATC
ATAACAATAGTGTTTGGAATGGTTATTGGATAAACAACGCGTTCCTGTGA
CTAACGACCGAATGCAAGTCGACCTCAAAAAGGTATAAAATGCTGGGAAG
GGTTTGGACAAAAAGATGAACTCAGAACTTTAATCAGTGTTGGCGCTCTC
GTGTGGAATTAATTCTCTGTAGTTCTTCTGTAGTTTATGGATTTTTCAAa
tctatatttttcaatttcattgttGAAACAGGTTAGAAAAGCCATTTTGA
CGATCCGAAAAAATTGctacattgggctcttccagaaaatcttcgtacat
ggggggt
Run BLAST on NCBI

protein sequence of TCONS_00067153-protein

>TCONS_00067153-protein ID=TCONS_00067153-protein|Name=TCONS_00067153-protein|organism=Clytia hemisphaerica|type=polypeptide|length=120bp
PGPGGSAKDICTKKYQKITIFKMNDKSAIEKNDIGALTDDQQSKLNSFKI
KTRMGNEKYLREHPEIDCLISSFVSEVCIQRPNNVREFAADYFTDPDLKL
KVQALVQKKESSLKRNQNNS
Run BLAST on NCBI

transcript from alignment at scaffold_464:172399..179400-

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00067153 ID=TCONS_00067153|Name=TCONS_00067153|organism=Clytia hemisphaerica|type=transcript|length=7002bp|location=Sequence derived from alignment at scaffold_464:172399..179400- (Clytia hemisphaerica)
CCAGGACCAGGTGGTTCTGCTAAAGGTAAAGTCAGTGCAAATTATTGAGT AATACTTTATACTTTTATCTTTTATCAATACAATGATTGACTGTTCCCAA CCAATATCAATGTTCCCCAGACAACAACCTGTATTATACATACTCTTTTT TAGGTGCCAAATAAACGCCCCCCCCCGCTTGTTAATTTTCAATTTTTTTC CAACCCCCTGGACCTTATTAGGACCCCCCCCCGTTTATTAATTTTTGAGA AAATTCCCAGCTACCAAAAGGATAAGTTCCTTGTTTTACTCTAAAACTAN ATAGGAAACAAATATTAAATTTGATTCTTTTTTTGTTCGTATTTCTAAAT TTCACGATAAAAAGAACTATTTACAAATTATTTTCTTTAACAGGCATTGA ATCGACATTGACATATTTAATGATGTCATAATCAATGCAGTGCATATTTT GTCAGCGCCGTGCATCATTTTCATTGGATAAATACCACTAAAATATACAA GATAAGTAAAAATAAATTTATCGCCCACGAGCAGAGCTTAGCTAAGCGCA CCTCTCTTAAAAATTCATTATCTAAGAATTGAAGCAGGCAAAGATTATCG CGCAGGCTGATAGCGGACAAAGGTTATTTGAAGATATTTGCAGCTATAAA CCAAGGTAGAACAAACTAAACATAGAAAGGGGTTATTTTTTAGTGCTCTA TATATACGATGATCAGTAATTTTTTTGAATTCTATGTTTAGATTTTTCTA TCCAGCCCCGTTCCTATGTACGCGCGCCCTGTTGCTAAGACCTTTGCTTG AAATCGATAGTGAAACCAAAATTAATTTAGCGCACACTGCCGTTTGCGTA ATATTGATAAAGTGAAAGGAGGTCCTGACTGAAGTGTGACAGTGTGATGT GGACCGTGTGAATCCCGTATTCATTCTCAGATTTAATATTTAAGCTTTTA TAAAATAAAAGTTTGGTGCGTAGCTTCGCCTTGAGTGATATATCAGGTTT GCATGATGAAGCACCTTGTTTGATTGACTCAAAGGTTTACATCTAGCTAA AAAATATGCTAAAATATACTCAACAGTCAGTTTGGTTTGGTTGGCAAACG ATATTATACTCCAGGATGCATCGTCTCTTATTTGGTTTGGTCTAGACATC CTGTGATCAGATTGTGATTGTTTTCTGCTTACCACACTGAAGAGGATGAG TGAAAACAAAACAATCTGAAGAATAGACCTTTTTGCCTTTCCATCCGCCA CTGTATTTAATTGTATATAAGTGTATGCAAAAATTATGGTTGCCAAATTG CTGTGGTGATATTACATTGAAAATATGCAAAACCTATGCAAAAAGAAAGT ATTTTTAATATAAAACTTACATGTTGCATTGGACGGTGAAAAAGAATGCA GCTATTATATTTTGATTTTTCCCGACATGTTTCGGACTCGGTCCAGTCTC AAGGGAATGATAATTCTATAGAAAAAAAAGAGTTTTTATACAAAATTATT TGACTTCAAATTGGACAAATACGTCATTTTAGGCGATATATAAAACTTAC ATGCATACTTGGCATTATATTAAAGTGTAATCTTGCGGAAGAAAGATCAA ATTTGTTTCTCTTGAAAAACTAAAGATTTGAAGGGTGAATATGTGGTCAA ATGGGTTCTACCATAAATTTTGAGTAATGCTTTCAAAGGCTTTCAAAAAT CAACAAAGTATAAAATAATGTTCTTATATAATGACTGTCTAAAATACAAT ATACCGGGTGCGCCACAAAAAAGTTTCTCTCTTTGAAACTGATTTTTTCG AAATCTAAGAATTAAGAAACAAACATTCCTATTCCATCAAAAAGAAGAAA GATAAGCTTAAATTTTCCGTGATCAGTGGCTTAGGTTTTTTTCTCATCTT CAATTTACTGAAGAAAGCAGGTATTTGATGCGAGAGTTAGATTGTCAAAA AAGTGCCGGAAAAAATAGGAGTAATAAAGTGAAACATAGAAAAGTTTCAT TTTTCATTGCATTAAAATTGAAATGGGGGATTTGGAAAATTTTTTATGCT TAGTTTTTTTGCACAAACCCATGTAACTATGGGAGAGCACCTTGGCTAAG ATGTTTGCTTGAAATCGAAAATGAAACCACTCAAAACGAAAGTAAAATCG GCCCGTACTCGAAATCCCGTAATCTTGATATACAAGTTTAAAGTCTATAC TGTCATGTTACAAATTGGACTCATAGATAAATTATTGACCTGAGAAAAAA TTAGTTTTTGGGAATTTATTGATTATGGAAGCTATATGACATATTCTAAA AACTTTGATATACACAGTGCTTGTATACAAGGGCCACACCAACTTTGCCT TTTTTTAACTTTTGATAACAACGCTTTTTTATTGTATATATTAAGATTAC GGCAAACAGAAGCATGTTTTATTTTGCAACTAAGCCCTTAGTATACATCT TGTACTAGTGCCTTGCCTATTCTGTTGTTCGTGCGACCCAAACATTTGTC CTTTCTGCAATGATCAACATTCTTGTCATGGGATCATCCCCCCAGGAAGA TGGGGGGGGGAATCAGATTTTGGTGCCAGGGGGGAAGTGAGAATTTCAAG CTTGATGAGGGGAGAAAGGCGAATAGGGGTTATATTCAGTCCTTTACCTA GTGGGGGGAAGTAATAGGATAAATACAGACCTTCCTGGTGTGTTTGGGCA TTCAGGCTTATGAGCCTGTCTTTCTAGGGATTGAGAGTCTTTTTTTGCTA TAGTAGCTTGCGAATTGAGGCGAGTCTGGATCATCACTTCGCAACCCTTA TACAATACAGCTAGGGGGATAGCCCAATTGGGGGAGCACGAATTTTAAAA ATAGGTGGGGGGGAAAGGCCAGATGGGGGAATTTAGCTCATATTAGGAAC CAAAAAGCTGGAGGACACCATGCTTGTATTATTTCATTGTGTTTATACCC TTTGAAAGAGTTATATAAAAATAACTGAAAGGGGGTTNGCATGTTTTATT TTGCAACTAAGCCCTTAGTATACATCTTGTACTAGTGCCTTGCCTATTGT GTTGTTCGTGCGACCCAAACATGTGTCCTTTCTGCAATGATCAACATTCT TGTATTATTTCATTGTGTTTATACCCTTTGAAAGAGTTATATAAAAATGA CTGGAAGGGGGTTAGAGAGACATATTCAGGATCTTGCCAAAGTTTTGGCA CTTCTACAGCCAAGTTAGAAAAAGTTATTGATGACTAATAGATCAAATTT GAATTCGGTAGAATTTTAAGTTTCTCGTAAAAATCGTAATGGTAATGTTT TAACTGTCTTAATTTTTACTTAGATATTTGTACAAAGAAATACCAAAAAA TAACAATTTTTAAGATGAACGACAAAAGCGCAATCGAGAAGAATGATATT GGAGCTTTGACAGATGACCAACAGTCTAAATTGAATTCATTTAAAGTGAG TGTTGTTTTTCTTTCTGAACTACTTTTCGCTTATCGGTATTTCCACAATT TAAGGTTAAAGAGTTTGGATTCGGATTGGTAGATTTCTTGCTATTACATA GTGTCCTCCCCAATGGGAATGGGTTTTGAGGTCAAAAGGACGTATAGGGG GGAAAGAACTTTTTTTGAAGCCAGGTTGGGGGAAAATGAGGGGGGGGGGA ATGGAAAATTTTCATTCTAGGCATGGGGGGAACTCACCAAAATCAATTCA AAATTGAAAAACATCTGGTTTTATGAGATGATGTTGTGATCAAGAATATG AAGATCATTTATTTCAACCAGCAATATTACGATTTAAAAACAACCATCCT TTCCATTTATTCTTGAATTAGAACTACCTTGGGAAAACAATAAGCGTTAA ATTCATCAAATTACAGCTTTTTATGCTTGAGGGGGGGGGGACAGAGAAAT TTTTGGAGGCAGGGGGGGGGAAAACGAGGGGGGGGGGAATGGAAAAATTT CATTCTAGGCATGGGGGGGACTCACCAAAATCAATTCAAAATTGAAAAAC ATCTGGTTTTATGAGATGATGTTGTGATCAAGAATATGAAGATCATTTAT TTCAACCAGCAATATTACGATTTAAAAACAACCATCCTTTCCATTTATTC TTGAATTAGAACTACCTTGGGAAAACAATAAGCGTTAAATTCATCAAATT ACAGCTTTTTATGCTTGAGGGGGGGGGGACAGAGAAATTTTTGGAGGCAG GGTGGGGAAAAATGAGGGGGGGGATGGGAAATTTTCATTCTAGGCATGGG GGGAAGAGACCCTAAAGGACACGTCATATACTTCTACACTGCCAGGTGGT TGCAAAATTTCGTCGACATTACCTTTAAATAAAATTATGAATGTTAAACT TCTACCTTGAGTTGTTTTTCATAAGAATATCCAAAACTTTTGAAGCCTTC AAATGTTCATAAATTTTTTAGTTTTAAGGCTAAAAATGGTTGTTCCTAAT TCCAACACTTCCATTTCCTAAGAAATTTGGTGTTTTAGAATTCACGAAGC CTTAAAATGTGCTTAACTATTTCCTAAAATTTTGGCCATTAACGTTTTAT GTCCTTGTATAAAAAACGTTTAAGTGAGATAAAATACGTTCTACATTCTT TTCTCATCACAGATCAAAACTCGAATGGGGAATGAGAAATATTTGCGAGA ACATCCTGAAATTGATTGCTTGATTTCCAGTTTTGTCAGGTGAGAGAAAT ATGGATGAATAATGTTCTCCAGGTTGATGGGTCTATTGAACTTTTCTAGA CCTGCGGCAGTAGTATAGATCAGAGGGTTGCAAACTTTGTGTAGGGGAGC AGATCTTTATTACAAAGTAAATATCTTGTCATATAATAAAAAGATGATTA CTGTGTTATAAAAATGTGATCTCTGACACAAATTTTGCGCCCTGAAACAT TTTTTATGAAATTTTGCACACTGATGACAAAATGACAATACCTAAAATGG GATTTTCCAGAAAAAAACCGTGTACCCCCTGTTGAGGAGGTCCAACCTTT TGTGACCTACCCCCTTGGAATTCCAGGCAATTTAGGATCATACCCCTCTG GAATTTCGAATTTTTACAAATTTTCAATGATTACCCCCTTGGAATTCCGC TTATTTTTGACGGATTTTCGTCTACCCTTGTTCCACTGCATTTCAAACCT TACCCCCTTGGAACGGAAATGGACCTCCTCAACAGGGGGTGCACGATTTT TTCTGGAAAAGCCCAATGTTACGGAGCCCGATTTTCAAGCCGGAAAAAAC CGGTTTTTTGACATTTTCTCGAATTTTCATCCTTAGTTTTTTTCTGATTT TTTGCAGAAAGATGCGTATTCGCAATGCTCAAAACATGGCCGATTTTTTC CGGTTGAAAATACTGGATTTGCAGATTTTCATTGAATTACATTACATTTC TATGTTTTTCACACAAAAACATTATTGATAACAATGCTCACCATCAAGCA TGATTCAATTGTTAATAAAACTGATTTTTGCGACCAGAACTTTTTATATA TTTTATCCCTACAACCCTTCTCTCTCCCCCCATCAACAATCAATGATGAA TTTATTGCGTTATGCATTTTCGCTAAACGCTATATTTTCTGACTGATTTT TTTTAATTTTCTCCTCGCATTGCTATCTAACTTTCATCATCAGGTAGGTC CATTCATTCAGCATCTAGCTTGTTTTTACCTAGAACTCATTTTGGTGAAT GGCTTCGGAAACTGGTTCTCTGTTGCCTGAAAATAAGGTAGTCTTATTGT TTGAATTTGGAACTAGTGACAAAGGCCGGTCATCTTCGGGTGTTTCCGTA AATAAATAATTATGTTATAATTTAACTTTATTTTTCTACTTGCAGTGAAG TGTGTATACAACGTCCAAACAACGTCCGAGAATTTGCAGCCGGTATAAAT CTTTCATTTATTGTTACAAGAGTCTCTATAACACAAACACACAAGGGTAT AGATTTGATACTGCTGGTCAAGAATTCTTAAGAAATTGCCAAAATTGAGG GTGAAATATTCTTAACGTATTCTTACTTTTTTAAACATGAGAAATGATCA ATTTGAGAGTTTTGGACTTTTGAGTGAACATTTGGGTTAAAATTACATTT CTTCCTCATGTCAAAGCTTCAATTTATCTCTAACAAAGGAAGCAGTTTTT TCTGTTAACCAAATACAAAATGACTGTATTCTTATCAAATTATGTGAGGG TATTCTTAGGGTATTCTTACGATTTGGCCAATTTTCACCCTTATATTCTT ATAGAAGATATTCTTATAAAAAAAGCGTGTAAGACAAAAAATGTAAAATG ATCGATATTTGGATTAACTTTTCTCGAAGATACACTTTCTCGGAATTTTT TTTTCTATATTTCTTACCTAAAGGGCCCAGAAAACTTTTGGGTTATGGAG TGAAGATTCACTGTGATGAGGTTATTGTAAAGGACCCCATGTCGGTCTCA TTGTGCCTTTCAAAGGCATTCTTCTTGTCCGCGGTCCGCCTTTTGAACAG AATGTCATCGATGTCGTGAATTATGCCTGTATCTGACAATTTAATGATTG TTCTTCTTTATTTTAGATTATTTCACAGACCCAGACTTGAAATTGAAAGT TCAAGCGCTTGTGCAGAAGAAAGAGTCGAGCTTGAAACGAAACCAAAACA ACAGTTAGTAAGAAGGCGCATCATGGATTTTATGGGTCGATTATCATAAC AATAGTGTTTGGAATGGTTATTGGATAAACAACGCGTTCCTGTGACTAAC GACCGAATGCAAGTCGACCTCAAAAAGGTATAAAATGCTGGGAAGGGTTT GGACAAAAAGATGAACTCAGAACTTTAATCAGTGTTGGCGCTCTCGTGTG GAATTAATTCTCTGTAGTTCTTCTGTAGTTTATGGATTTTTCAAATCTAT ATTTTTCAATTTCATTGTTGAAACAGGTTAGAAAAGCCATTTTGACGATC CGAAAAAATTGCTACATTGGGCTCTTCCAGAAAATCTTCGTACATGGGGG GT

Coding sequence (CDS) from alignment at scaffold_464:172399..179400-

>TCONS_00067153 ID=TCONS_00067153|Name=TCONS_00067153|organism=Clytia hemisphaerica|type=CDS|length=1815bp|location=Sequence derived from alignment at scaffold_464:172399..179400- (Clytia hemisphaerica)
ATTATTTCACAGACCCAGACTTGAAATTGAAAGTTCAAGCGCTTGTGCAG
AAGAAAGAGTCGAGCTTGAAACGAAACCAAAACAACAGTTAGTGAAGTGT
GTATACAACGTCCAAACAACGTCCGAGAATTTGCAGCCGATCAAAACTCG
AATGGGGAATGAGAAATATTTGCGAGAACATCCTGAAATTGATTGCTTGA
TTTCCAGTTTTGTCAGATATTTGTACAAAGAAATACCAAAAAATAACAAT
TTTTAAGATGAACGACAAAAGCGCAATCGAGAAGAATGATATTGGAGCTT
TGACAGATGACCAACAGTCTAAATTGAATTCATTTAAACCAGGACCAGGT
GGTTCTGCTAAAGATTATTTCACAGACCCAGACTTGAAATTGAAAGTTCA
AGCGCTTGTGCAGAAGAAAGAGTCGAGCTTGAAACGAAACCAAAACAACA
GTTAGTGAAGTGTGTATACAACGTCCAAACAACGTCCGAGAATTTGCAGC
CGATCAAAACTCGAATGGGGAATGAGAAATATTTGCGAGAACATCCTGAA
ATTGATTGCTTGATTTCCAGTTTTGTCAGATATTTGTACAAAGAAATACC
AAAAAATAACAATTTTTAAGATGAACGACAAAAGCGCAATCGAGAAGAAT
GATATTGGAGCTTTGACAGATGACCAACAGTCTAAATTGAATTCATTTAA
ACCAGGACCAGGTGGTTCTGCTAAAGATTATTTCACAGACCCAGACTTGA
AATTGAAAGTTCAAGCGCTTGTGCAGAAGAAAGAGTCGAGCTTGAAACGA
AACCAAAACAACAGTTAGTGAAGTGTGTATACAACGTCCAAACAACGTCC
GAGAATTTGCAGCCGATCAAAACTCGAATGGGGAATGAGAAATATTTGCG
AGAACATCCTGAAATTGATTGCTTGATTTCCAGTTTTGTCAGATATTTGT
ACAAAGAAATACCAAAAAATAACAATTTTTAAGATGAACGACAAAAGCGC
AATCGAGAAGAATGATATTGGAGCTTTGACAGATGACCAACAGTCTAAAT
TGAATTCATTTAAACCAGGACCAGGTGGTTCTGCTAAAGATTATTTCACA
GACCCAGACTTGAAATTGAAAGTTCAAGCGCTTGTGCAGAAGAAAGAGTC
GAGCTTGAAACGAAACCAAAACAACAGTTAGTGAAGTGTGTATACAACGT
CCAAACAACGTCCGAGAATTTGCAGCCGATCAAAACTCGAATGGGGAATG
AGAAATATTTGCGAGAACATCCTGAAATTGATTGCTTGATTTCCAGTTTT
GTCAGATATTTGTACAAAGAAATACCAAAAAATAACAATTTTTAAGATGA
ACGACAAAAGCGCAATCGAGAAGAATGATATTGGAGCTTTGACAGATGAC
CAACAGTCTAAATTGAATTCATTTAAACCAGGACCAGGTGGTTCTGCTAA
AGATTATTTCACAGACCCAGACTTGAAATTGAAAGTTCAAGCGCTTGTGC
AGAAGAAAGAGTCGAGCTTGAAACGAAACCAAAACAACAGTTAGTGAAGT
GTGTATACAACGTCCAAACAACGTCCGAGAATTTGCAGCCGATCAAAACT
CGAATGGGGAATGAGAAATATTTGCGAGAACATCCTGAAATTGATTGCTT
GATTTCCAGTTTTGTCAGATATTTGTACAAAGAAATACCAAAAAATAACA
ATTTTTAAGATGAACGACAAAAGCGCAATCGAGAAGAATGATATTGGAGC
TTTGACAGATGACCAACAGTCTAAATTGAATTCATTTAAACCAGGACCAG
GTGGTTCTGCTAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_041955XLOC_041955Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00067153-proteinTCONS_00067153-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00067153-exon-scaffold_464-1575043694:179376..179400TCONS_00067153-exon-scaffold_464-1575043694:179376..179400Clytia hemisphaericaexon
TCONS_00067153-exon-scaffold_464-1575043694:175956..176077TCONS_00067153-exon-scaffold_464-1575043694:175956..176077Clytia hemisphaericaexon
TCONS_00067153-exon-scaffold_464-1575043694:174712..174788TCONS_00067153-exon-scaffold_464-1575043694:174712..174788Clytia hemisphaericaexon
TCONS_00067153-exon-scaffold_464-1575043694:173509..173555TCONS_00067153-exon-scaffold_464-1575043694:173509..173555Clytia hemisphaericaexon
TCONS_00067153-exon-scaffold_464-1575043694:172399..172834TCONS_00067153-exon-scaffold_464-1575043694:172399..172834Clytia hemisphaericaexon
TCONS_00067153-exon-scaffold_464-1510915933:179376..179400TCONS_00067153-exon-scaffold_464-1510915933:179376..179400Clytia hemisphaericaexon
TCONS_00067153-exon-scaffold_464-1510915933:175956..176077TCONS_00067153-exon-scaffold_464-1510915933:175956..176077Clytia hemisphaericaexon
TCONS_00067153-exon-scaffold_464-1510915933:174712..174788TCONS_00067153-exon-scaffold_464-1510915933:174712..174788Clytia hemisphaericaexon
TCONS_00067153-exon-scaffold_464-1510915933:173509..173555TCONS_00067153-exon-scaffold_464-1510915933:173509..173555Clytia hemisphaericaexon
TCONS_00067153-exon-scaffold_464-1510915933:172399..172834TCONS_00067153-exon-scaffold_464-1510915933:172399..172834Clytia hemisphaericaexon
TCONS_00067153-exon-scaffold_464-1491911889:179376..179400TCONS_00067153-exon-scaffold_464-1491911889:179376..179400Clytia hemisphaericaexon
TCONS_00067153-exon-scaffold_464-1491911889:175956..176077TCONS_00067153-exon-scaffold_464-1491911889:175956..176077Clytia hemisphaericaexon
TCONS_00067153-exon-scaffold_464-1491911889:174712..174788TCONS_00067153-exon-scaffold_464-1491911889:174712..174788Clytia hemisphaericaexon
TCONS_00067153-exon-scaffold_464-1491911889:173509..173555TCONS_00067153-exon-scaffold_464-1491911889:173509..173555Clytia hemisphaericaexon
TCONS_00067153-exon-scaffold_464-1491911889:172399..172834TCONS_00067153-exon-scaffold_464-1491911889:172399..172834Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_464supercontigscaffold_464:172399..179400 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
28.7099 27.7883 13.3092 9.07525 88.0978 66.0479 42.7729 50.1615 41.1826 35.9161 33.6341 36.7704 9.19168 8.46315 6.95786 7.85756 14.0117 15.6771 9.542 11.3322 14.6024 13.1028 16.4183 16.6346 34.8019 33.3126 17.974 11.989 17.6329 18.7708
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR003117cAMP_dep_PK_reg_su_I/II_a/b
Blast
BLAST of TCONS_00067153 vs. Swiss-Prot (Human)
Match: RIAD1 (RIIa domain-containing protein 1 OS=Homo sapiens GN=RIIAD1 PE=4 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 2.665e-21
Identity = 37/68 (54.41%), Postives = 51/68 (75.00%), Query Frame = 1
Query:   85 IEKNDIGALTDDQQSKLNSFKIKTRMGNEKYLREHPEIDCLISSFVSEVCIQRPNNVREFAADYFTDP 288
            +++ D GAL+  Q  +L  FKI+TR+ NEKYLR H E++ LIS F  E+ ++RP+N+ EFAADYFTDP
Sbjct:    8 LQRPDPGALSAAQLEQLRKFKIQTRIANEKYLRTHKEVEWLISGFFREIFLKRPDNILEFAADYFTDP 75          
The following BLAST results are available for this feature:
BLAST of TCONS_00067153 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
RIAD12.665e-2154.41RIIa domain-containing protein 1 OS=Homo sapiens G... [more]
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