XLOC_041955 (gene) - C. hemisphaerica

Overview
NameXLOC_041955
Unique NameXLOC_041955
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_464:172399..179400-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_041955 ID=XLOC_041955|Name=XLOC_041955|organism=Clytia hemisphaerica|type=gene|length=7002bp|location=Sequence derived from alignment at scaffold_464:172399..179400- (Clytia hemisphaerica)
CCAGGACCAGGTGGTTCTGCTAAAGGTAAAGTCAGTGCAAATTATTGAGT AATACTTTATACTTTTATCTTTTATCAATACAATGATTGACTGTTCCCAA CCAATATCAATGTTCCCCAGACAACAACCTGTATTATACATACTCTTTTT TAGGTGCCAAATAAACGCCCCCCCCCGCTTGTTAATTTTCAATTTTTTTC CAACCCCCTGGACCTTATTAGGACCCCCCCCCGTTTATTAATTTTTGAGA AAATTCCCAGCTACCAAAAGGATAAGTTCCTTGTTTTACTCTAAAACTAN ATAGGAAACAAATATTAAATTTGATTCTTTTTTTGTTCGTATTTCTAAAT TTCACGATAAAAAGAACTATTTACAAATTATTTTCTTTAACAGGCATTGA ATCGACATTGACATATTTAATGATGTCATAATCAATGCAGTGCATATTTT GTCAGCGCCGTGCATCATTTTCATTGGATAAATACCACTAAAATATACAA GATAAGTAAAAATAAATTTATCGCCCACGAGCAGAGCTTAGCTAAGCGCA CCTCTCTTAAAAATTCATTATCTAAGAATTGAAGCAGGCAAAGATTATCG CGCAGGCTGATAGCGGACAAAGGTTATTTGAAGATATTTGCAGCTATAAA CCAAGGTAGAACAAACTAAACATAGAAAGGGGTTATTTTTTAGTGCTCTA TATATACGATGATCAGTAATTTTTTTGAATTCTATGTTTAGATTTTTCTA TCCAGCCCCGTTCCTATGTACGCGCGCCCTGTTGCTAAGACCTTTGCTTG AAATCGATAGTGAAACCAAAATTAATTTAGCGCACACTGCCGTTTGCGTA ATATTGATAAAGTGAAAGGAGGTCCTGACTGAAGTGTGACAGTGTGATGT GGACCGTGTGAATCCCGTATTCATTCTCAGATTTAATATTTAAGCTTTTA TAAAATAAAAGTTTGGTGCGTAGCTTCGCCTTGAGTGATATATCAGGTTT GCATGATGAAGCACCTTGTTTGATTGACTCAAAGGTTTACATCTAGCTAA AAAATATGCTAAAATATACTCAACAGTCAGTTTGGTTTGGTTGGCAAACG ATATTATACTCCAGGATGCATCGTCTCTTATTTGGTTTGGTCTAGACATC CTGTGATCAGATTGTGATTGTTTTCTGCTTACCACACTGAAGAGGATGAG TGAAAACAAAACAATCTGAAGAATAGACCTTTTTGCCTTTCCATCCGCCA CTGTATTTAATTGTATATAAGTGTATGCAAAAATTATGGTTGCCAAATTG CTGTGGTGATATTACATTGAAAATATGCAAAACCTATGCAAAAAGAAAGT ATTTTTAATATAAAACTTACATGTTGCATTGGACGGTGAAAAAGAATGCA GCTATTATATTTTGATTTTTCCCGACATGTTTCGGACTCGGTCCAGTCTC AAGGGAATGATAATTCTATAGAAAAAAAAGAGTTTTTATACAAAATTATT TGACTTCAAATTGGACAAATACGTCATTTTAGGCGATATATAAAACTTAC ATGCATACTTGGCATTATATTAAAGTGTAATCTTGCGGAAGAAAGATCAA ATTTGTTTCTCTTGAAAAACTAAAGATTTGAAGGGTGAATATGTGGTCAA ATGGGTTCTACCATAAATTTTGAGTAATGCTTTCAAAGGCTTTCAAAAAT CAACAAAGTATAAAATAATGTTCTTATATAATGACTGTCTAAAATACAAT ATACCGGGTGCGCCACAAAAAAGTTTCTCTCTTTGAAACTGATTTTTTCG AAATCTAAGAATTAAGAAACAAACATTCCTATTCCATCAAAAAGAAGAAA GATAAGCTTAAATTTTCCGTGATCAGTGGCTTAGGTTTTTTTCTCATCTT CAATTTACTGAAGAAAGCAGGTATTTGATGCGAGAGTTAGATTGTCAAAA AAGTGCCGGAAAAAATAGGAGTAATAAAGTGAAACATAGAAAAGTTTCAT TTTTCATTGCATTAAAATTGAAATGGGGGATTTGGAAAATTTTTTATGCT TAGTTTTTTTGCACAAACCCATGTAACTATGGGAGAGCACCTTGGCTAAG ATGTTTGCTTGAAATCGAAAATGAAACCACTCAAAACGAAAGTAAAATCG GCCCGTACTCGAAATCCCGTAATCTTGATATACAAGTTTAAAGTCTATAC TGTCATGTTACAAATTGGACTCATAGATAAATTATTGACCTGAGAAAAAA TTAGTTTTTGGGAATTTATTGATTATGGAAGCTATATGACATATTCTAAA AACTTTGATATACACAGTGCTTGTATACAAGGGCCACACCAACTTTGCCT TTTTTTAACTTTTGATAACAACGCTTTTTTATTGTATATATTAAGATTAC GGCAAACAGAAGCATGTTTTATTTTGCAACTAAGCCCTTAGTATACATCT TGTACTAGTGCCTTGCCTATTCTGTTGTTCGTGCGACCCAAACATTTGTC CTTTCTGCAATGATCAACATTCTTGTCATGGGATCATCCCCCCAGGAAGA TGGGGGGGGGAATCAGATTTTGGTGCCAGGGGGGAAGTGAGAATTTCAAG CTTGATGAGGGGAGAAAGGCGAATAGGGGTTATATTCAGTCCTTTACCTA GTGGGGGGAAGTAATAGGATAAATACAGACCTTCCTGGTGTGTTTGGGCA TTCAGGCTTATGAGCCTGTCTTTCTAGGGATTGAGAGTCTTTTTTTGCTA TAGTAGCTTGCGAATTGAGGCGAGTCTGGATCATCACTTCGCAACCCTTA TACAATACAGCTAGGGGGATAGCCCAATTGGGGGAGCACGAATTTTAAAA ATAGGTGGGGGGGAAAGGCCAGATGGGGGAATTTAGCTCATATTAGGAAC CAAAAAGCTGGAGGACACCATGCTTGTATTATTTCATTGTGTTTATACCC TTTGAAAGAGTTATATAAAAATAACTGAAAGGGGGTTNGCATGTTTTATT TTGCAACTAAGCCCTTAGTATACATCTTGTACTAGTGCCTTGCCTATTGT GTTGTTCGTGCGACCCAAACATGTGTCCTTTCTGCAATGATCAACATTCT TGTATTATTTCATTGTGTTTATACCCTTTGAAAGAGTTATATAAAAATGA CTGGAAGGGGGTTAGAGAGACATATTCAGGATCTTGCCAAAGTTTTGGCA CTTCTACAGCCAAGTTAGAAAAAGTTATTGATGACTAATAGATCAAATTT GAATTCGGTAGAATTTTAAGTTTCTCGTAAAAATCGTAATGGTAATGTTT TAACTGTCTTAATTTTTACTTAGATATTTGTACAAAGAAATACCAAAAAA TAACAATTTTTAAGATGAACGACAAAAGCGCAATCGAGAAGAATGATATT GGAGCTTTGACAGATGACCAACAGTCTAAATTGAATTCATTTAAAGTGAG TGTTGTTTTTCTTTCTGAACTACTTTTCGCTTATCGGTATTTCCACAATT TAAGGTTAAAGAGTTTGGATTCGGATTGGTAGATTTCTTGCTATTACATA GTGTCCTCCCCAATGGGAATGGGTTTTGAGGTCAAAAGGACGTATAGGGG GGAAAGAACTTTTTTTGAAGCCAGGTTGGGGGAAAATGAGGGGGGGGGGA ATGGAAAATTTTCATTCTAGGCATGGGGGGAACTCACCAAAATCAATTCA AAATTGAAAAACATCTGGTTTTATGAGATGATGTTGTGATCAAGAATATG AAGATCATTTATTTCAACCAGCAATATTACGATTTAAAAACAACCATCCT TTCCATTTATTCTTGAATTAGAACTACCTTGGGAAAACAATAAGCGTTAA ATTCATCAAATTACAGCTTTTTATGCTTGAGGGGGGGGGGACAGAGAAAT TTTTGGAGGCAGGGGGGGGGAAAACGAGGGGGGGGGGAATGGAAAAATTT CATTCTAGGCATGGGGGGGACTCACCAAAATCAATTCAAAATTGAAAAAC ATCTGGTTTTATGAGATGATGTTGTGATCAAGAATATGAAGATCATTTAT TTCAACCAGCAATATTACGATTTAAAAACAACCATCCTTTCCATTTATTC TTGAATTAGAACTACCTTGGGAAAACAATAAGCGTTAAATTCATCAAATT ACAGCTTTTTATGCTTGAGGGGGGGGGGACAGAGAAATTTTTGGAGGCAG GGTGGGGAAAAATGAGGGGGGGGATGGGAAATTTTCATTCTAGGCATGGG GGGAAGAGACCCTAAAGGACACGTCATATACTTCTACACTGCCAGGTGGT TGCAAAATTTCGTCGACATTACCTTTAAATAAAATTATGAATGTTAAACT TCTACCTTGAGTTGTTTTTCATAAGAATATCCAAAACTTTTGAAGCCTTC AAATGTTCATAAATTTTTTAGTTTTAAGGCTAAAAATGGTTGTTCCTAAT TCCAACACTTCCATTTCCTAAGAAATTTGGTGTTTTAGAATTCACGAAGC CTTAAAATGTGCTTAACTATTTCCTAAAATTTTGGCCATTAACGTTTTAT GTCCTTGTATAAAAAACGTTTAAGTGAGATAAAATACGTTCTACATTCTT TTCTCATCACAGATCAAAACTCGAATGGGGAATGAGAAATATTTGCGAGA ACATCCTGAAATTGATTGCTTGATTTCCAGTTTTGTCAGGTGAGAGAAAT ATGGATGAATAATGTTCTCCAGGTTGATGGGTCTATTGAACTTTTCTAGA CCTGCGGCAGTAGTATAGATCAGAGGGTTGCAAACTTTGTGTAGGGGAGC AGATCTTTATTACAAAGTAAATATCTTGTCATATAATAAAAAGATGATTA CTGTGTTATAAAAATGTGATCTCTGACACAAATTTTGCGCCCTGAAACAT TTTTTATGAAATTTTGCACACTGATGACAAAATGACAATACCTAAAATGG GATTTTCCAGAAAAAAACCGTGTACCCCCTGTTGAGGAGGTCCAACCTTT TGTGACCTACCCCCTTGGAATTCCAGGCAATTTAGGATCATACCCCTCTG GAATTTCGAATTTTTACAAATTTTCAATGATTACCCCCTTGGAATTCCGC TTATTTTTGACGGATTTTCGTCTACCCTTGTTCCACTGCATTTCAAACCT TACCCCCTTGGAACGGAAATGGACCTCCTCAACAGGGGGTGCACGATTTT TTCTGGAAAAGCCCAATGTTACGGAGCCCGATTTTCAAGCCGGAAAAAAC CGGTTTTTTGACATTTTCTCGAATTTTCATCCTTAGTTTTTTTCTGATTT TTTGCAGAAAGATGCGTATTCGCAATGCTCAAAACATGGCCGATTTTTTC CGGTTGAAAATACTGGATTTGCAGATTTTCATTGAATTACATTACATTTC TATGTTTTTCACACAAAAACATTATTGATAACAATGCTCACCATCAAGCA TGATTCAATTGTTAATAAAACTGATTTTTGCGACCAGAACTTTTTATATA TTTTATCCCTACAACCCTTCTCTCTCCCCCCATCAACAATCAATGATGAA TTTATTGCGTTATGCATTTTCGCTAAACGCTATATTTTCTGACTGATTTT TTTTAATTTTCTCCTCGCATTGCTATCTAACTTTCATCATCAGGTAGGTC CATTCATTCAGCATCTAGCTTGTTTTTACCTAGAACTCATTTTGGTGAAT GGCTTCGGAAACTGGTTCTCTGTTGCCTGAAAATAAGGTAGTCTTATTGT TTGAATTTGGAACTAGTGACAAAGGCCGGTCATCTTCGGGTGTTTCCGTA AATAAATAATTATGTTATAATTTAACTTTATTTTTCTACTTGCAGTGAAG TGTGTATACAACGTCCAAACAACGTCCGAGAATTTGCAGCCGGTATAAAT CTTTCATTTATTGTTACAAGAGTCTCTATAACACAAACACACAAGGGTAT AGATTTGATACTGCTGGTCAAGAATTCTTAAGAAATTGCCAAAATTGAGG GTGAAATATTCTTAACGTATTCTTACTTTTTTAAACATGAGAAATGATCA ATTTGAGAGTTTTGGACTTTTGAGTGAACATTTGGGTTAAAATTACATTT CTTCCTCATGTCAAAGCTTCAATTTATCTCTAACAAAGGAAGCAGTTTTT TCTGTTAACCAAATACAAAATGACTGTATTCTTATCAAATTATGTGAGGG TATTCTTAGGGTATTCTTACGATTTGGCCAATTTTCACCCTTATATTCTT ATAGAAGATATTCTTATAAAAAAAGCGTGTAAGACAAAAAATGTAAAATG ATCGATATTTGGATTAACTTTTCTCGAAGATACACTTTCTCGGAATTTTT TTTTCTATATTTCTTACCTAAAGGGCCCAGAAAACTTTTGGGTTATGGAG TGAAGATTCACTGTGATGAGGTTATTGTAAAGGACCCCATGTCGGTCTCA TTGTGCCTTTCAAAGGCATTCTTCTTGTCCGCGGTCCGCCTTTTGAACAG AATGTCATCGATGTCGTGAATTATGCCTGTATCTGACAATTTAATGATTG TTCTTCTTTATTTTAGATTATTTCACAGACCCAGACTTGAAATTGAAAGT TCAAGCGCTTGTGCAGAAGAAAGAGTCGAGCTTGAAACGAAACCAAAACA ACAGTTAGTAAGAAGGCGCATCATGGATTTTATGGGTCGATTATCATAAC AATAGTGTTTGGAATGGTTATTGGATAAACAACGCGTTCCTGTGACTAAC GACCGAATGCAAGTCGACCTCAAAAAGGTATAAAATGCTGGGAAGGGTTT GGACAAAAAGATGAACTCAGAACTTTAATCAGTGTTGGCGCTCTCGTGTG GAATTAATTCTCTGTAGTTCTTCTGTAGTTTATGGATTTTTCAAATCTAT ATTTTTCAATTTCATTGTTGAAACAGGTTAGAAAAGCCATTTTGACGATC CGAAAAAATTGCTACATTGGGCTCTTCCAGAAAATCTTCGTACATGGGGG GT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00067153TCONS_00067153Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00067153-proteinTCONS_00067153-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_464supercontigscaffold_464:172399..179400 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
RIIAD1RIIa domain-containing protein 1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
28.71 27.79 13.31 9.08 88.1 66.05 42.77 50.16 41.18 35.92 33.63 36.77 9.19 8.46 6.96 7.86 14.01 15.68 9.54 11.33 14.6 13.1 16.42 16.63 34.8 33.31 17.97 11.99 17.63 18.77