TCONS_00067131 (transcript) - C. hemisphaerica

Overview
NameTCONS_00067131
Unique NameTCONS_00067131
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length835

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00067131 ID=TCONS_00067131|Name=TCONS_00067131|organism=Clytia hemisphaerica|type=transcript|length=835bp
TTCACCTTTTCCGTTCGGCTGAACacataaaaatgaaatcttAACAACTT
GGATTTCCAGTAAAATTGATGTGCAGTGGTTGGTTGACacaaatattaca
aaaaatatgTCTCGGAGAGAGCTGAAAAAGGAAATTGAATACTTGAAAAC
AGTCTTTCCGAAGACTCAACATGTTCTACGGATCTTGTCTGCAAGTACAG
ATGATCTGACTTGCTCATTTACCGACAACTCTGGCAAGAAGCACACAATT
ATATGTAGCATTACAGATAGCTATCCCGATTTTCCTCCAATATGGTGCTC
AGAATCTGAGGCGCCACAACTTGTCGAAatcgttgaaaaaattaatgcaa
tcacATCAAGCAATCATTTATTATTTACAATGACTAAAACACTGGCTAtt
gaactttttacaatgatcaaAGTTGAAGTACCTACAAGTGTACTAGAAGC
TACTTTAGTCTCTGATGAGAAGGGAGTAGATGAAGATTACGAGATGGATG
AAGTAGACTGTGATGATGAagaggaaaatgaaattgaagatgaagatgat
gacGATGACCCCATTGACCAAGAGTGTTTCGATTTCAGGGAAGACCCTGT
CAAtGACGAATCAAAGGAGAAAGATGAAGTTGGGGAAGCCAATTATTCAC
AACTTCAAAAGTTACGAGGCGTCCAAAGGGAAGAATATCTATCGGGCAAA
GTAAGCGGCTCAGTACAAGCAACAGATCGATTgatgaaagaattaaaaaa
tatttataagtCAGATAGCTTCAAAAAAAATTTATATACACTGGAGTTAA
AAGAAGAAAGTAATTTATATGACTGGTTTGTAAAA
Run BLAST on NCBI

transcript from alignment at scaffold_464:37672..50658+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00067131 ID=TCONS_00067131|Name=TCONS_00067131|organism=Clytia hemisphaerica|type=transcript|length=12987bp|location=Sequence derived from alignment at scaffold_464:37672..50658+ (Clytia hemisphaerica)
TTCACCTTTTCCGTTCGGCTGGTAAGTTTTATGTTCCTATCTTTAGTTTT
TTACTGTGTTTGGATTAAGCCTTTTTTTAGATTAGCAATCAAAACAGACA
GCTTGGTAAAATCTGTTTTCATTTTGAGAAATACCTCGCAGAAGTCCAAG
TGTGATATCGAtgatgaattgaattgaattgaattgaattgaattgaata
tcagttagggaaaccatccaggatcctgccattctataagccagaaaaaa
ctaaatgacacttgtaaacttaagtttcttactattttccatcaaaaaca
accaaaaacatttgctacttcccaaagctggagaccaaaacaaattatct
tccaagattatggcgcctttttagatctattgttatggccatctaaaatg
gtggaaagagttgcggaaagacaggggcgcccgctagcttcgagggtggc
aacgccaaaacgcccaatacgatcttccaacaaaaggcgagttatttacc
gcgcgagttacgtcatacactccaccgcagcaCACAACAAacggtgtttc
agtgaatatcaataattataagaaaatcttatgtgcttaaattcagtaaa
ctttgagttcttcattgaagatttagaagataagaagataaaaaatgcgc
tggataattttcattgtaacagtttggtcaatcatagctgaaagtttgaa
aaagtttttccgacgctaaaaaaaatttcagccaattaaaagcacaatgt
gcttatatttactgtgtttgctacatcgtctaggctaaaaaaagtgcgaa
aatacacgaacgtcattttttaatgagtgttgttatgattttttagatcg
cGGTTTACAGGAACTCgtcaaatgttcctaactgaatatattttcgctgc
aacacagcaggataaccccttacaaaaaaaaaaatagatttctctaatac
aatggggaacctagaagaaactgaaaaattattacagaactaaagaaaaa
atgaataaacgattatcataatattaatagtgacaacaaataatgaatat
aagaaatatttttttattttcattttatgacaatttctttgagaagtttt
atttataaagttcttcctgttacaccacccaccccctcccaccctgggaa
aacacactaagttCACGCACACACAATACACGCACACATACACANNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNAATCAGtgtcaggatgatttattagtaactcattc
cattgttttgacgaaagacgagagaaagagttaagtccaaaatttgtggt
tttgaccgttgaaagttttaggggacccgtccatattcatttgacaacgc
aaaacatcaaattgacgttatcctcttcaaactgagcaaaaaaatgtatt
atatcaaagtctcaacttttttagatcaaaagttatagacgattttatgg
tcaaaaattgattgaaaacagggaatttcNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNgcccataacttttgatctagaaaag
ttgagactttgatataatacatttttttgctcagtttgaagagctctatc
acgtggtataggtcttttttgatttgaagacccccccaaaatcatgaatt
ttcagggcttacaattttgcctaaaaacccaaaaaatcgcaaaattacgt
aaaaactgcgggttttcaagcttggtaacattcaaattccgaatcagcac
cctcaaattgaccaagaaagatatcaaaagtttattcaccGACATTTTNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGC
GGTTAGTGAGGTAAGATCGGAACCAGTCGTTAACAATGCCTCTGACTCCG
TAGTGATCGagtttttcaagtaaaatttcGTGATCAACTGTGTCGAAAAC
CTTTTGTAGATCGACAAATACACCACAGGCAAACCTACCATTGTCAAGAT
AGTTTCGGATACGTTCGACAATATTAATGAGTGTATGCTCAGGTAGAGTG
AGCcttacgaaaaccaaattgtcgAGAGTAGATTTGATTATGGTTTTCAA
GAAAGTCAGAGAGACGTGAATACATCActttctcagaaaaattttcaatg
ttggataaaagtgaaattggcCTATAATTAGAGACTTCAAGGGGAGAACC
TTTGTGTTTGAAGACAGGCACAACTTTAGATATTTTGAGAGTAGAGGGAA
AAATACCACTGAGAAAGGAGTAGTTTATCAGCGCCAATATTGGCACAGAA
ATGAGAGTCCTTGAGTCCTCAGTTATTCTTGTTGGTAAAAGGATCTGTGG
AAGTATAAGATTAGAATCGAGGATATCCATGAAGGACATTATTTCTGAGT
CATCCTCGCATTTTAAAAGATTAAGATTGAAGTCTCCAAGAAGGAGGAGT
TGCTTTTTCTCAGAAGAAATTTTACTTAGCAAAGGTTTTAGAAAATCTTG
ATTGAAGCCAACCATTTTTGGATGGCGATATATAGTACTAACAATGATAT
TGGTACTGTTTGGTAGGATAATTTCAGCAAAGCATGATTCAAGACTACAT
GAAGAATAGCAAACTTGATcgtgttcaaaaaagaatgacataattcaact
tttttagtgATGATTTCAAAAAGCCTATATAATGTGATATTTTGTGGCTa
cagttaaaaaaatttattcccacgtcccaaaatgacaaaaatttcttttg
cattTGAAACGAAATTTCTAGTGATCTTCAGGGGCTAGTAATTAGCCTTT
AAAGTGTGTGAAAGATTGTGGCTAATTTTTTGAGTGGCTAATTCTACCAA
CTAATTTCAAAAAGGTGTAGCAACTTCAATTTAAAAGATCAGTCACCCAA
ATTTTGCACAGGTTACattgaataataaaattttgagattatGTGAAAAG
ATGTGGGCTATTGATCCTTGAAAGTGAAATAATGTGGTTAATAGACTTAA
AATGCACCCAGAGACAAaagtattgaataaaaaagtctaATCGtggaatt
tgaaagttttttgctgGAGATGATACTTATTGaatggttttgttttcatt
ttctgagGATACAACATCAGAAATGTGAATTTAAGTGGCTAAATACTCCT
TGCAATTGTGATGTTTGACTTGAGGAAAAACGTACTGACTTTATTCACCA
TGTAAGAAAGCTGTAGTTATGAAATTTTGGGATATTGTGCTAAATATGTG
GCTAATTCCATATAAATACTTTTTGTAACACTTCCTGTAtgattttgtgt
taaaatgtgTGGCTATTTGCATACTTAGTAACTagcagtttttttcattt
taagcctaatttatAGATTTCCCCTGTCATGTTTTATTGCCACAATTATT
CACatatcaattttaaagaaaggTATACAAGGTATCAAAAGAAAGCCAAT
GGAATTTTCCAAAGTTTAGACAAGGTTATTCTTTCACTCACGACGTGAAA
AAATGTGGGTAGCCTTTTTAATAATCCGGAAATTTTAGTAAGTTTTTTTT
AGCCACGTAGAATCACAGGGCAACTATTAGTTGATACTTTTGAATTcaga
aagtgaaaatttgatctTCAAGCTATAGTCTCAAACAATTCAGGTCTTTG
GAATTCTTTTGTGAATGGGTGTGGCTACCATTTAAAATAAgggccttttt
tcaaaaaagtgtgaaTATTAGCCGCATGATTTCACAAATTAGTAGgtaaa
atacttcaaatatgTTCTATTTTTTACTAGTTTTTCAAGAACACCAGATT
CATTATTTTCATCACTAGTATTTATTTGCTATATTGGTTTTTTaactatt
gaaaaaatatcaaaacagcGAGTTCAAGCcacaatttttcacatttatca
cttgaaattctttcacaTAAGTATATCTTAGAAAAGTTCAATCTGTGATC
TTCAACTTTGAACCAGTTCCAAATGTGGATATTCAATAAGTGCTTGATTG
AGgctatttcaaaaaaagatagaaaaagggTAATATTAGCCTCAAAACTg
cacattttgataaaaaaaaattccagtgaATTCCTAGAGTCCTAATCCAC
AATCCTGTATTTTTCCCTCTTTCGTGAAACATTTGCTGAGAAGTTACACG
ACATTatccaaaatcaacaaaaattgcatttttccaatgtgtcattcttt
tttgaacagaatCACTTGGTCTAGGTCTGTCATAAGTTTGTAAGAGAAAG
AGTGTGAAATATATAAGGCCACTCCACCTTTAGAAGATTCAGTTggtgta
aaaaattttttcgtaACCTGGTATAGCAAAGTCCTCTTTTTTTTCAAGAG
GACTTTCTGTTTCTGTTTCTGTTTGCGATGACGCAAgcaattaacaaaat
aaaaaaaagaaagatcaaagagattttctttaaggcggcaatcacaaata
tcttcgtttcgtgtcgcccgaccgactcctGAAAATTCCAGCAAACTAAC
TGGAACGTGCCGCCTTCATTCAGCGTCTTAGAACATCTTGcgctaatgtt
tttaactttttattttattttatcctttatgtttaaaatcacgaaaatgt
acgtaatgtattatgtgataattcaatagaactagaactagaactagaac
tagaactagaactagaactagaactagaactagaactagaacagaacaga
tattttgaagtccccttcctttcggtggatgctttcgtcAAAAAAACAGA
CAGCTGTACATGTTAGGCTTCACTTAGCTGTACagttaaggcttcacttt
ttcttgcctgagaaaggttagagattgaactatagcccttcgggctttaa
actcaatggttagcCTGGTCTCCcgccctagagcgatttgcattctccat
aTGAGTATTCTGGAGCAAGATATCCACGATATAATTACAATAGTGCTCAc
tgcagtgtagacctaaagctctaaaacagcatctaataacatgaaaacca
gaatatgattcttcaatgggaatcaaaactataaagtgcacttacaaaca
tcaatttgtcagatctaacaaaattaataactgcactgtcatcattgaca
ataaaacgattttctgtcaaagccttgtaaacattccaacaacttccatc
gaaatgatctatcacagctcagtccaCTATTTTTAGCGCgatccgaggat
tgagccgagaatcGCTActcgaactcctgcgcgggtgaaaaacttcaatc
tgtcaatcattttctcaagcgaagagtacgcgaagcgattctagctttac
gatagtgccgcgggtcatcaatggatagtaattaatcaaaccaatcgaac
tgtATTTTTAGtcgaactttgtcaaacttaatcgaactttgttggcCGAA
TAATGTTTGACTAAGTTTGGTTGTCGAATTTAATGGAATACtctcacaaa
tttctcaaaatacaaagttcgattactgaaatcgaactcaatcgaacttt
ttttaaagagaccttgacagttcgattagttcgattacatTAATCAAACT
AAATCGAACAAATCGAActaaaatcaaactttgtcaagttaaatcgaaca
aaaatttgagaaaacccgAGCAACTGAAGGCCGCTTCACTTGCGCGAaat
tcgatcgcactttttgccgGCCTTTGACAACACTTttaggaactttgaag
cacccctgCTGGTGCAGACGTGTATCCTCACaccccctgaccagtgggca
ccgatCAAACTCCCCGGAACCCTGGCCGGGACCTTCAGGGGCCGGCCACG
GTGGTatccaaaggaggtcattttttccaattttgaccaatttcattttg
aacagttcggtaatcgaactgttcgattaattacgtctggattAATGGCT
GAACAATCATCCTCAaagactatatatatataagtATTTTATTTGACCAA
AGTCCATCTTCTGGGGACAAATACAATTTTGTAACCatgtttaaatgttt
ttttagaaCGTGTTAAAAATCACTTACTCCGGAAGCATTGGAAGAGCTCC
AGAACTTTCCGGAGAggaaaatagtgttttttagcTGCTCCGGAAAACTC
CGGAagtttccggagcgccgggagggtcctgtTGCGAAGCGTTCCGGATT
CCACCTCAATTttcaagttgctagcaaaataagagccACTCTGATAAAAC
CCCAAAAGAGACAGGGTCTTAAGTCTTATAATACCCCAAACACAACACAC
AAagcacggcggcacaacacacCCACCGCCTGGCACAACGCTCTTCTTTC
CTTCTAGTTCTGTAAGTGGTGCCTGGGTAAATTGTCCCCTTGCGAAAAAG
AAATTAAGCCTCTGGTGTTTAGCTGCAAAAGTTTCCAATTTACACTTACA
GAGAAACCATAATCAAGTCAAAAGCTTTATGTTCAGTACTAACTACTTTT
TtctccatttaacagcaaaaaaaaatttaaaaccaaaaaaacactGTTTA
GATACGCACCGCGTAtcaatttgataattttcagctTCTTAAAGTCCGTG
tctcggcttccggtaatttttcctgttcactgctagggtacaccatttta
aaacagcatttttcgcagtcctagctacctaACCGAGAAAATTTTCGTGG
CTTTAAGCCAAATccttcaaggtcattttgacaaaatcatcggtttgaag
atgtgatttatatagcaaagtttcgcttgggatagaagttaaaggtacgt
gcacacaatgctcataaattcgcttcgcaaaaaaaaagtgttaaaaatac
caggtacctggaagtattcttaaagtattcttattcttaaatttaggggg
tacctggtgtttgggggtacctgcaTTTTCACAAGTGGGCGCGGGGGCTG
TTATTTTTGTATGAAGTCATGGTGGCCAGCAACCCTTGAATtccttgaaa
cacccttgatttttttcctgctcttaaaaatttccttcaaaCCCTTGAAG
AATCAATATTATTTTGGGGACCCTTGATGTGCAAGATTTATACCCTTGAC
ACCCTTGAAATGCCAAATTTTGCagccattttcagccattttaactTTCG
gaaataccgtgagtggtccttaatctaaaaaaaaaccttttgctgtgacg
caatgaagataccaaagtgtcaattaaactgagagatttgatacactgaa
ccaattgaaccaaataacaataattgcttcattatacaaaacataatttt
ttattacaaaattgttataaacgttttaaaaacttttttaatcacattaa
ttgacatcttgtcattatagtcatcttgttagatgttttgtttcgagagt
tcttacaacagtttattgttcaacttggagagcgAATGTTTATAGAcatt
ttcatagcagttatttggggagtcagatttaggcagggctgtcagattta
ggactcCACGCTCATTCTTAATAAATGGTTTACCCTTTAATCCGTTAGCT
AAGTGCCACTGGAATTACATGAGATCGGCAGGTCTGGGTGATAGAATGGG
TGGttgtaaaattatcaattatcagcCAATCTAAAGAActgaaaatcaaa
gattttctctgTCGGACCCAACTGCCCTCCTTTACCACAACGATAAAGAA
AGTGTCTGTTGAAGAATGTTATTAAGGTTATGTTTAAAATCAAGGGGATT
GAAAAGACTGAtttgtttgaaagattttaaggtttttatgattttgttaa
aAGAAAACGTCTGGGGTATTTTATTGTCTGGTAGATTTCCTTGAAATCCT
TTAAAGCTAGCAAAGATCAACTAAAAACCCTAGAAACTCTTGAAagtttg
tggtaaaaaacttttgaaaccctggaaaattagtcaagaatgaaaaagaa
acccttgaatttgttgaaaaagaagtGATGTTCACCATGGAAgtaggtac
catcataggtaaaagatggctcaagcagatttttgcaaaaaattttgttg
cctcaaaaaacgcatgtttaccTACAAGAATCActtttaataagcataca
tcaatgttcttagtcaaattattcaatttttttatgagatagatgtttta
tttgctcacgagggcttacttttaaagaatatatgtgtttggatatgaaa
ttttgtttgcttggcgtgtttttatagaaaaactggccaaattcgatatt
tttttataagcacattatcaattactcaggtattagcttttctcgaNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNctcgagattggc
tctttcattctttatgattttttgcacaaagatgcataactataaaccct
cgaatgtgatggagctcgatttttggaaaaaaaattttgggttaaatttc
agctaaaaaacggcaacaaaaaaaagggttttttggactttgtgaaatat
tggatcattgactttttgcatgaaagtaggtaaaagatggctcaagctga
tttttgtaaaaaaataattttttagctcaaaaaacgcatgtttatctgta
agaatcactattaataagcatacatcaatgttcttaaaattaccaaattt
tttgatgagatatgtttttttgctcacgaagtcttgaatatgaaagaata
tttaaaaagcatgaaattttgctttctaaacgtttgttttataagaaaca
aacaactaattttgatagatcgtcactatttgcgttatgaatgattgttt
aatggtcacgctcacgtagatatcaattataatatgtgttaaatgcataa
ccaggtaggtccataaaagtatcacttgttccaATTCTTTTTTAACTCGC
TTTTTTATTAAGTAAAGCAAAAATGAATTAAGGTGCTCTAAAAATATAGG
CACGTGAAAATATACGAAGGCGCAAATTCTCAAGGTCAAGAACCTCATGT
AGAATATGAAACAGCAAAATTATAAAtaaagctatttttgtaataCTTTG
ATGGGATGAAATTTtttggggattaaatttcggaCATTTGCAAATTTTGG
TGTCATTTGCATCGGAATAACTTTAGAggcaaattcaaaaaagttttagc
TGCGAAAAAAATTCTTACAGTAAATGGACTTTTCAATGAATGGAAAACTC
CTTCATGAAAATTATCGTTTTTTCAACCATTGGCGAAAATAAgttccaga
aaatatttgaaaacgcGTCACCCACAGAATTCCCGCAAATTTATCTAAAT
TTTGCAGACAGGTTGGTTCATCAGCAAATTTATTTCTTGTGAAAATTCAT
CACGATATCAAGGtacattgaaaatttatatttaacCCACCAGGAGAGTA
TCTTTCTccactctttttcttttacagtaataattaaaaacatttgaaaa
ttgtcCCTCAATACAGAACacataaaaatgaaatcttAACAACTTGGATT
TCCAGTAAAATTGATGTGCAGTGGTTGGTTGACacaaatattacaaaaaa
tatgTCTCGGAGAGAGCTGAAAAAGGAAATTGAATACTTGAAAACAGTCT
TTCCGAAGACTCAACATGTTCTACGGATCTTGTCTGCAAGTACAGATGAT
CTGACTTGCTCATTTACCGACAACTCTGGCAAGAAGCACACAATTATATG
TAGCATTACAGTaagttatgaaatatttcaaataaaactATTGTTCTCTG
TAAGCACTCTGTATAATAAAGTACTGTGCCGGATACTCCGTGTTCTGAAG
AGGCAAATTATATCAGGAAGAATTATCTATCAACTTGTGCATTAGATCAa
acaaaaattggcttttgaaTTATAAACTTGTTGTTTGTTTGTTCTctgat
gttttctttttttgttgtggTATAATTTGACTTTTGCTAAAAAAGGCTAC
GCATTATAATAACGTGATTCTTCATATACTATTGTTTTAAAACAGTTTGA
AAATCCTCTATCGTCTCCTCTTCCAGGATAGCTATCCCGATTTTCCTCCA
ATATGGTGCTCAGAATCTGAGGCGCCACAACTTGTCGAAatcgttgaaaa
aattaatgcaatcacATCAAGCAATCATTTATTATTTACAATGACTAAAA
CACTGGCTAttgaactttttacaatgatcaaAGTTGAAGTACCTACAAGT
GTACTAGAAGCTACTTTAGTCTCTGATGAGAAGGTATTTACTTTACCTGG
ATTTCTGGAAATGCTCATCTCCCttaattttgctcaaaaaagtgGTGAAT
CAGGAAATATCAAAAAgtgttcatttttgttttttttgcttattagaGGG
TCAAATATCTCAGGCCTCAAACAAAGCTTGATGTTCGATAGTTTGGAGAG
ATTATTGCAGCTTTTTATACTTCAAATAGTATTCAACCttctttttatta
aaataaaattgtgacATTTCTCCTGACCTTTCCGTCTCTCCCTCCCACCt
tttaagatgaaaaattgTACTGAAAAACTTCCATTTATAAacggaaagaa
aatttcagtttttttctctttactCAGGGAGTAGATGAAGATTACGAGAT
GGATGAAGTAGACTGTGATGATGAagaggaaaatgaaattgaagatgaag
atgatgacGATGACCCCATTGACCAAGAGTGTTTCGATTTCAGGGAAGAC
CCTGTCAAGTGAGTGTTTTGAAAGTATCTTATCTTCACCTTTCCAAGGCT
GTTTCGTTTCTTTTGAGATTCATTCCTCGTTCTAAAAAGGACATCATAAA
ACGTATCTTCAACCATGTGCTTCACCCAgtattttttcagcaaaaacttT
ATCCCCCTTCTCTCGCTGCGCTGCAAGCACAATTTGTTTGGAAACTGTTT
TGTTatttctgctttgtcagcattaTTGACTTTCTATATCATTAAAAAGA
AtatctatttatttttctttactttagtGACGAATCAAAGGAGAAAGATG
AAGTTGGGGAAGCCAATTATTCACAACTTCAAAAGTTACGAGGCGTCCAA
AGGGAAGAATATCTATCGGTAAGGGGTCTTAAACTGTTCCTAAAATTTTC
TTATCatatatacacgttttctttaagaacgattttataagaacataatg
ttctaaaaatgaaaaaaaaaacctgaaaCCAAAGAAACCTAAGTTtttaa
attcctttttatagTAAATTTGTAATAAGCATatgaagaacattttaagc
ctgaaaaaatcaaaaaacaataagaacagccaagctccagccaaaattaa
ttgaggcttacaaatttgattttctctCTACCTATCCTTCAAAAACATAC
ATGACATCAATAACTGATTCTATATTATATTTTCAGGGCAAAGTAAGCGG
CTCAGTACAAGCAACAGATCGATTgatgaaagaattaaaaaatatttata
agtCAGATAGCTTCAAAAAAAGTAAGTGCTCCAATATTGATGACCAAAGT
tctttggacctacctgaaaaGAAGTCCTTTGAATTAAACTTTTCACCTTA
TCACGAATACAGTATTTAAAAAGCAAttataaaaatggtagacagcattg
tattttttttcaagatatttcgaTTTGAAAGTTAAAGTATTAGACATTAT
TTCAACGTCGGGTGTAGTGTGGTGCTTTTTCGGGATTATAGATAtgggat
tttaagattttatcatttttgtctATTTCAGATTTATATACACTGGAGTT
AAAAGAAGAAAGTAATTTATATGACTGGTTTGTAAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_041945XLOC_041945Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00067131-exon-scaffold_464-1491911889:37672..37692TCONS_00067131-exon-scaffold_464-1491911889:37672..37692Clytia hemisphaericaexon
TCONS_00067131-exon-scaffold_464-1510915933:37672..37692TCONS_00067131-exon-scaffold_464-1510915933:37672..37692Clytia hemisphaericaexon
TCONS_00067131-exon-scaffold_464-1575043694:37672..37692TCONS_00067131-exon-scaffold_464-1575043694:37672..37692Clytia hemisphaericaexon
TCONS_00067131-exon-scaffold_464-1491911889:48338..48581TCONS_00067131-exon-scaffold_464-1491911889:48338..48581Clytia hemisphaericaexon
TCONS_00067131-exon-scaffold_464-1510915933:48338..48581TCONS_00067131-exon-scaffold_464-1510915933:48338..48581Clytia hemisphaericaexon
TCONS_00067131-exon-scaffold_464-1575043694:48338..48581TCONS_00067131-exon-scaffold_464-1575043694:48338..48581Clytia hemisphaericaexon
TCONS_00067131-exon-scaffold_464-1491911889:48898..49104TCONS_00067131-exon-scaffold_464-1491911889:48898..49104Clytia hemisphaericaexon
TCONS_00067131-exon-scaffold_464-1510915933:48898..49104TCONS_00067131-exon-scaffold_464-1510915933:48898..49104Clytia hemisphaericaexon
TCONS_00067131-exon-scaffold_464-1575043694:48898..49104TCONS_00067131-exon-scaffold_464-1575043694:48898..49104Clytia hemisphaericaexon
TCONS_00067131-exon-scaffold_464-1491911889:49449..49579TCONS_00067131-exon-scaffold_464-1491911889:49449..49579Clytia hemisphaericaexon
TCONS_00067131-exon-scaffold_464-1510915933:49449..49579TCONS_00067131-exon-scaffold_464-1510915933:49449..49579Clytia hemisphaericaexon
TCONS_00067131-exon-scaffold_464-1575043694:49449..49579TCONS_00067131-exon-scaffold_464-1575043694:49449..49579Clytia hemisphaericaexon
TCONS_00067131-exon-scaffold_464-1491911889:49849..49939TCONS_00067131-exon-scaffold_464-1491911889:49849..49939Clytia hemisphaericaexon
TCONS_00067131-exon-scaffold_464-1510915933:49849..49939TCONS_00067131-exon-scaffold_464-1510915933:49849..49939Clytia hemisphaericaexon
TCONS_00067131-exon-scaffold_464-1575043694:49849..49939TCONS_00067131-exon-scaffold_464-1575043694:49849..49939Clytia hemisphaericaexon
TCONS_00067131-exon-scaffold_464-1491911889:50258..50342TCONS_00067131-exon-scaffold_464-1491911889:50258..50342Clytia hemisphaericaexon
TCONS_00067131-exon-scaffold_464-1510915933:50258..50342TCONS_00067131-exon-scaffold_464-1510915933:50258..50342Clytia hemisphaericaexon
TCONS_00067131-exon-scaffold_464-1575043694:50258..50342TCONS_00067131-exon-scaffold_464-1575043694:50258..50342Clytia hemisphaericaexon
TCONS_00067131-exon-scaffold_464-1491911889:50603..50658TCONS_00067131-exon-scaffold_464-1491911889:50603..50658Clytia hemisphaericaexon
TCONS_00067131-exon-scaffold_464-1510915933:50603..50658TCONS_00067131-exon-scaffold_464-1510915933:50603..50658Clytia hemisphaericaexon
TCONS_00067131-exon-scaffold_464-1575043694:50603..50658TCONS_00067131-exon-scaffold_464-1575043694:50603..50658Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_464supercontigscaffold_464:37672..50658 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
48.1547	51.1582	69.9473	60.3886	21.3078	9.71693	16.3899	24.8952	15.5158	16.6021	7.68991	16.1675	15.4981	13.8435	14.107	15.5156	17.9247	19.9826	11.0658	12.2485	16.9645	10.2506	20.7246	29.4522	27.5638	28.6894	12.5603	8.62858	10.6163	15.4409
Blast
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BLAST of TCONS_00067131 vs. Swiss-Prot (Human)
Match: UB2Q2 (Ubiquitin-conjugating enzyme E2 Q2 OS=Homo sapiens GN=UBE2Q2 PE=1 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.643e-34
Identity = 90/252 (35.71%), Postives = 145/252 (57.54%), Query Frame = 2 
Query:  107 MSRRELKKEIEYLKTVFPKTQHVLRILSASTDDLTCSF-TDNSGKKH------TIICSITDSYPDFPPIWCSESEAPQLVEIVEKINAITSSNHLLFTMTKTLAIELFTMIKV--EVPTSVLEATLVSDEKGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFREDPVNDESKEKDEVGEANYSQLQKLRGVQREEYLSGKVSGSVQATDRLMKELKNIYKSDSFKKNLYTLELKEESNLYDWFVK 835
            MS   LK E+++L ++F K     RI+S   D+L C F     G  H      T+ C+IT+SYP   PIW  +SE P L  ++E++   T +N+LL    K L  EL ++  +   +   +L+  L + + G  E+   +E + ++E   +IED D  +           E+P++ +  E + + + N + L+K+R  QR+++L+G VSGSVQA+DRLMKEL++IY+S S+K  +Y++EL  +S LYDW VK
Sbjct:    1 MSVSGLKAELKFLASIFDKNHERFRIVSWKLDELHCQFLVPQQGSPHSLPPPLTLHCNITESYPSSSPIWFVDSEDPNLTSVLERLED-TKNNNLLRQQLKWLICELCSLYNLPKHLDVEMLDQPLPTGQNGTTEEVTSEEEEEEEEMAEDIEDLDHYEMK--------EEEPISGKKSEDEGIEKENLAILEKIRKTQRQDHLNGAVSGSVQASDRLMKELRDIYRSQSYKTGIYSVELINDS-LYDWHVK 242
The following BLAST results are available for this feature:
BLAST of TCONS_00067131 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
UB2Q22.643e-3435.71Ubiquitin-conjugating enzyme E2 Q2 OS=Homo sapiens... [more]
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