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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00067110 ID=TCONS_00067110|Name=TCONS_00067110|organism=Clytia hemisphaerica|type=transcript|length=1285bp
CGAGGTATTAATTAATACAGTTTTGTTAAGAGAGAAAGAAATTGTAATAA
CTAACCATACCATAACTCACATTACGTCAttcttaaaaaagaattacgaa
AAAAATGATCAACAACGAAAAATGTATGGTATCTGAAACTCGGAATATTT
CACTTATGATAACGAGAGACAGTAATCGAAAAGAATGTTTTGATAATCTG
TGTTCAAAGATGAGATAAAAAGAATCTGTGTTTATATATTCACGGTGAGA
CAAGCACCCAAACTGAAATGaatatttcttcattttgaacCACCGACACG
ACGAATTGGTCTGTCGGATATATACTACTGACGATCTGAAAATTCGCCGC
TGAATCTTTAGGTTTTTCCGACACAGTTCCCAACATCGCGTTGACGATGA
TCTTAACAAATTTTCCAGTTCTTAAGCGTATACAATCCCTTACACAGGTG
CAAATTTCTTTCGACCATTTTGGAGCAAGTTCTTCTACGTACTTTTTGGT
TCCAATAACTCGCAATGTTTCAGTTTGTATGATTGTTCGAACGTCGTTTT
TATCGATGTTAAGTTCATTgtgtttgttttgttgttgtgcTCTTGTAGTA
ATGTCTGATGAGTAACTTTTACACAATAGTGTATGTCTTGACGGTTGAAG
ATTTCCGTTTAGTTTTGGAAGTTGAAGTtcatcgatatctaatccattcT
CATTCGAGTCTCTTTGTTCAACTTCTGGCGAGTTTCCAATCTCTGAGGAC
gatttggatttctttttatatttcataGCAATCTTCTCTAGCTCCTTGTT
GCTCAAACTAGACTGTCGTCGCCGATATAAAAAACTTCGCGCCGAGCTTG
TACTTTGAGATCGGCGTCGTGGGGCCGTATTGTATTCCGATCCTAAACTA
TCATCGCTCGTCGTTGAACTTCTGCGATCGGAGAAATTAATACGCGGAAA
TTTCGGCGAACGCGCCTGACGTACCATTTCGGAGAAAATCTTGCGGAAAc
ctttcttgtttttgttttccttgctttgcattttgttgttgttgttgtta
taatccgccattatggatcaTTTAAAATACTGAGGTATATTACTACCAAC
TACTACACCATAAAGTAAATGGAGCCAACTTTCTATGGttgtcttttttt
acaaaaatatgtttttgataaaGACAATCAGATGATCCGTCTTAaacttc
ttaatttttttaaatgctcaTTTTTTGTGATCGTCTTCAGAATTGATAAA
AGGAAGGTTTTTTGTATGATTAAAATATTTGTACC Run BLAST on NCBI protein sequence of TCONS_00067110-protein >TCONS_00067110-protein ID=TCONS_00067110-protein|Name=TCONS_00067110-protein|organism=Clytia hemisphaerica|type=polypeptide|length=273bp
MADYNNNNNKMQSKENKNKKGFRKIFSEMVRQARSPKFPRINFSDRRSST
TSDDSLGSEYNTAPRRRSQSTSSARSFLYRRRQSSLSNKELEKIAMKYKK
KSKSSSEIGNSPEVEQRDSNENGLDIDELQLPKLNGNLQPSRHTLLCKSY
SSDITTRAQQQNKHNELNIDKNDVRTIIQTETLRVIGTKKYVEELAPKWS
KEICTCVRDCIRLRTGKFVKIIVNAMLGTVSEKPKDSAANFQIVSSIYPT
DQFVVSVVQNEEIFISVWVLVSP Run BLAST on NCBI transcript from alignment at scaffold_463:98131..99415 Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00067110 ID=TCONS_00067110|Name=TCONS_00067110|organism=Clytia hemisphaerica|type=transcript|length=1285bp|location=Sequence derived from alignment at scaffold_463:98131..99415 (Clytia hemisphaerica)
GGTACAAATATTTTAATCATACAAAAAACCTTCCTTTTATCAATTCTGAA
GACGATCACAAAAAAtgagcatttaaaaaaattaagaagttTAAGACGGA
TCATCTGATTGTCtttatcaaaaacatatttttgtaaaaaaagacaaCCA
TAGAAAGTTGGCTCCATTTACTTTATGGTGTAGTAGTTGGTAGTAATATA
CCTCAGTATTTTAAAtgatccataatggcggattataacaacaacaacaa
caaaatgcaaagcaaggaaaacaaaaacaagaaaggTTTCCGCAAGATTT
TCTCCGAAATGGTACGTCAGGCGCGTTCGCCGAAATTTCCGCGTATTAAT
TTCTCCGATCGCAGAAGTTCAACGACGAGCGATGATAGTTTAGGATCGGA
ATACAATACGGCCCCACGACGCCGATCTCAAAGTACAAGCTCGGCGCGAA
GTTTTTTATATCGGCGACGACAGTCTAGTTTGAGCAACAAGGAGCTAGAG
AAGATTGCtatgaaatataaaaagaaatccaaatcGTCCTCAGAGATTGG
AAACTCGCCAGAAGTTGAACAAAGAGACTCGAATGAgaatggattagata
tcgatgaACTTCAACTTCCAAAACTAAACGGAAATCTTCAACCGTCAAGA
CATACACTATTGTGTAAAAGTTACTCATCAGACATTACTACAAGAgcaca
acaacaaaacaaacacAATGAACTTAACATCGATAAAAACGACGTTCGAA
CAATCATACAAACTGAAACATTGCGAGTTATTGGAACCAAAAAGTACGTA
GAAGAACTTGCTCCAAAATGGTCGAAAGAAATTTGCACCTGTGTAAGGGA
TTGTATACGCTTAAGAACTGGAAAATTTGTTAAGATCATCGTCAACGCGA
TGTTGGGAACTGTGTCGGAAAAACCTAAAGATTCAGCGGCGAATTTTCAG
ATCGTCAGTAGTATATATCCGACAGACCAATTCGTCGTGTCGGTGgttca
aaatgaagaaatattCATTTCAGTTTGGGTGCTTGTCTCACCGTGAATAT
ATAAACACAGATTCTTTTTATCTCATCTTTGAACACAGATTATCAAAACA
TTCTTTTCGATTACTGTCTCTCGTTATCATAAGTGAAATATTCCGAGTTT
CAGATACCATACATTTTTCGTTGTTGATCATTTTTttcgtaattcttttt
taagaaTGACGTAATGTGAGTTATGGTATGGTTAGTTATTACAATTTCTT
TCTCTCTTAACAAAACTGTATTAATTAATACCTCG Coding sequence (CDS) from alignment at scaffold_463:98131..99415 >TCONS_00067110 ID=TCONS_00067110|Name=TCONS_00067110|organism=Clytia hemisphaerica|type=CDS|length=822bp|location=Sequence derived from alignment at scaffold_463:98131..99415 (Clytia hemisphaerica)
atggcggattataacaacaacaacaacaaaatgcaaagcaaggaaaacaa
aaacaagaaaggTTTCCGCAAGATTTTCTCCGAAATGGTACGTCAGGCGC
GTTCGCCGAAATTTCCGCGTATTAATTTCTCCGATCGCAGAAGTTCAACG
ACGAGCGATGATAGTTTAGGATCGGAATACAATACGGCCCCACGACGCCG
ATCTCAAAGTACAAGCTCGGCGCGAAGTTTTTTATATCGGCGACGACAGT
CTAGTTTGAGCAACAAGGAGCTAGAGAAGATTGCtatgaaatataaaaag
aaatccaaatcGTCCTCAGAGATTGGAAACTCGCCAGAAGTTGAACAAAG
AGACTCGAATGAgaatggattagatatcgatgaACTTCAACTTCCAAAAC
TAAACGGAAATCTTCAACCGTCAAGACATACACTATTGTGTAAAAGTTAC
TCATCAGACATTACTACAAGAgcacaacaacaaaacaaacacAATGAACT
TAACATCGATAAAAACGACGTTCGAACAATCATACAAACTGAAACATTGC
GAGTTATTGGAACCAAAAAGTACGTAGAAGAACTTGCTCCAAAATGGTCG
AAAGAAATTTGCACCTGTGTAAGGGATTGTATACGCTTAAGAACTGGAAA
ATTTGTTAAGATCATCGTCAACGCGATGTTGGGAACTGTGTCGGAAAAAC
CTAAAGATTCAGCGGCGAATTTTCAGATCGTCAGTAGTATATATCCGACA
GACCAATTCGTCGTGTCGGTGgttcaaaatgaagaaatattCATTTCAGT
TTGGGTGCTTGTCTCACCGTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00067110-exon-scaffold_463-1491911889:98131..99415 | TCONS_00067110-exon-scaffold_463-1491911889:98131..99415 | Clytia hemisphaerica | exon |
| TCONS_00067110-exon-scaffold_463-1510915933:98131..99415 | TCONS_00067110-exon-scaffold_463-1510915933:98131..99415 | Clytia hemisphaerica | exon |
| TCONS_00067110-exon-scaffold_463-1575043694:98131..99415 | TCONS_00067110-exon-scaffold_463-1575043694:98131..99415 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_463 | supercontig | scaffold_463:98131..99415 . |
Blast
The following BLAST results are available for this feature:
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