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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00067107 ID=TCONS_00067107|Name=TCONS_00067107|organism=Clytia hemisphaerica|type=transcript|length=745bp
CTGCTGGCTATCAAAAAGCAACACTTCAACTCAACAAACTTGTACCTAGT
TTGGAAGGTGGCGAATCCTATGTTATGGAAGTAACAATCCAGTTGTCGNC
AGCAAGTCATTTAAGCAAGTTTTCAACTTCACTTGCCCTCGGTCGGTTAA
GCACTCACGGTCAGTCTTCACGTAGCAGGCTGAAATCCAGCTGGGCTACG
TGTTCGTCGATGGCTGTCTTTACGGTTCCCGAAGGAATACCTCCCGCCAG
ATCTTAACGTTGTTCATTACTTTTAAGAGTATACTCTTTTGagtaatgac
gtaatgtttcggtatcaaaaatacacattatttcaatacagttttactgt
attttatatatcaaaaacaTACTATTTCAAAGTCTGACCCTAACCCAAAG
CTGCACTTAAACCAAACCATTTCACACATTCGGAttgcttgattttatta
atGTAACATTAGAATAATTATCTTTGCCTTACATGCTGAGAACAAAActa
atgataattttatggatgttttttgaaagtaattactcttttttttatgt
ttttagaattttgcacGATTTCAAACTCTAGTAATTGCATTTACTAagtt
atttcttcatttttatcatttttcgtcATTGTACATAtgtatattttttc
attgtAAAAGTTAGATATAATATTAGATCATAAAACATTCGGGATTCACA
AAATCCCAAATTAGGCTATAGGAGAGATACAGAAATGAATTTTNN Run BLAST on NCBI transcript from alignment at scaffold_463:213276..215125- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00067107 ID=TCONS_00067107|Name=TCONS_00067107|organism=Clytia hemisphaerica|type=transcript|length=1850bp|location=Sequence derived from alignment at scaffold_463:213276..215125- (Clytia hemisphaerica)
CTGCTGGCTATCAAAAAGCAACACTTCAACTCAACAAAGTAAGTCAACTT
GTAATTTATCAAACAAATCCAAGTATTTATATTGTTTTGTAGCTGAAAAT
AGTTGGTGGGCTAGTCTGTCACTTATACCACTTATACACAACAATTGACA
TATGCAGCCGGCGGAGAGATTTTTTAGAAATATGTGTTCTTATCTTCTAG
GAGACCACATGTTATGAACTTCGATTTTCTTATNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNAACTTTTTGATATACTTGTAAGATATTTGATTTT
TTCCACGAAAAATGTGTTCTGAAACTTTCTAGGGTTACCAGGCAACAATA
TCAAATAATTATTATCTATACTATACCCCCTATCTACTTAAAAGATGTGT
TCTGAAGCTTTCTAGGGTTACCAAGACAATACTGTAAGAACACGTTTGAT
GACCTTGGTTATACCCCTGTCTCGTCAGAACACACCATTATTTCTAGCTG
ATTAATTTTCGAAGATCTTATCAGAACAGATCAAAATTTCTAGCTGAAAC
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNCGAACAGTTTTTCTCGTTCCTTTGA
GAAAAACTAGGCTGTTTTTCTTCTCTAAAACTCGAACACCCCATAACTCG
AACGACTACGTAGTCGTAGTATACTGGACTCTGCTTGAGCCACAATAACT
GGACTGTTGTACCAAAACTCATTACTTTTTCTACTTTTCACAGCTTGTAC
CTAGTTTGGAAGGTGGCGAATCCTATGTTATGGAAGTAACAATCCAGTTG
TCGNCAGCAAGTCATTTAAGCAAGTTTTCAACTTCACTTGCCCTCGGTCG
GTTAAGCACTCACGGTCAGTCTTCACGTAGCAGGCTGAAATCCAGCTGGG
CTACGTGTTCGTCGATGGCTGTCTTTACGGTTCCCGAAGGAATACCTCCC
GCCAGATCTTAACGTTGTTCATTACTTTTAAGAGTATACTCTTTTGAGTA
ATGACGTAATGTTTCGGTATCAAAAATACACATTATTTCAATACAGTTTT
ACTGTATTTTATATATCAAAAACATACTATTTCAAAGTCTGACCCTAACC
CAAAGCTGCACTTAAACCAAACCATTTCACACATTCGGATTGCTTGATTT
TATTAATGTAACATTAGAATAATTATCTTTGCCTTACATGCTGAGAACAA
AACTAATGATAATTTTATGGATGTTTTTTGAAAGTAATTACTCTTTTTTT
TATGTTTTTAGAATTTTGCACGATTTCAAACTCTAGTAATTGCATTTACT
AAGTTATTTCTTCATTTTTATCATTTTTCGTCATTGTACATATGTATATT
TTTTCATTGTAAAAGTTAGATATAATATTAGATCATAAAACATTCGGGAT
TCACAAAATCCCAAATTAGGCTATAGGAGAGATACAGAAATGAATTTTNN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00067107-exon-scaffold_463-1575043694:215088..215125 | TCONS_00067107-exon-scaffold_463-1575043694:215088..215125 | Clytia hemisphaerica | exon |
| TCONS_00067107-exon-scaffold_463-1575043694:213276..213982 | TCONS_00067107-exon-scaffold_463-1575043694:213276..213982 | Clytia hemisphaerica | exon |
| TCONS_00067107-exon-scaffold_463-1510915933:215088..215125 | TCONS_00067107-exon-scaffold_463-1510915933:215088..215125 | Clytia hemisphaerica | exon |
| TCONS_00067107-exon-scaffold_463-1510915933:213276..213982 | TCONS_00067107-exon-scaffold_463-1510915933:213276..213982 | Clytia hemisphaerica | exon |
| TCONS_00067107-exon-scaffold_463-1491911889:215088..215125 | TCONS_00067107-exon-scaffold_463-1491911889:215088..215125 | Clytia hemisphaerica | exon |
| TCONS_00067107-exon-scaffold_463-1491911889:213276..213982 | TCONS_00067107-exon-scaffold_463-1491911889:213276..213982 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_463 | supercontig | scaffold_463:213276..215125 - |
Blast
The following BLAST results are available for this feature:
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