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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00067075 ID=TCONS_00067075|Name=TCONS_00067075|organism=Clytia hemisphaerica|type=transcript|length=560bp
ATAAATTCGAATAGCTTTTAAAGGACCAACCAAGTTAATTTTAAGTAAGT
GAAAGAATAAAAGCAGAGACGACTTCTTGTGTGTCAAATCCAAGTTGTTT
GTATACCAAAAAAACCGAGCTGTTTGTCAAAGCCGAACAAACCTGATAAT
CAATATGAAGTTTCTGGTGAAATTCTTTCTATTAACAACACTCTAGGTTC
CTGTCTTCGAAGCGAATGGGGCTGGAAACAACATCAACTGCCCACGAGGA
GATCCCAAACTTTATTCACTCCCTTACCCTATGTTTAATTACATACCAAG
TGCACAGAATTTCCAGACCGCTAAATCGTGCGAGTTTGTGGACCTCAATA
GTGACGGATTCGTAGACTTCGCTTGCAGTTTTTGTGAGGGAGATGTACTT
TCATATTGTCTTACAGATTCTCCTTTTTCTCACCCTCTACAATGTACCTA
CATGAACACGAAATGTGGTTGGGTTCTGGCTGAGGAATATAAATATGGAA
CTGATTACTGTTCCTAATAGGCTGTTTTTGTCTTAGTTGTAAAGATgtct
taaatttttt Run BLAST on NCBI transcript from alignment at scaffold_463:45112..46369+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00067075 ID=TCONS_00067075|Name=TCONS_00067075|organism=Clytia hemisphaerica|type=transcript|length=1258bp|location=Sequence derived from alignment at scaffold_463:45112..46369+ (Clytia hemisphaerica)
ATAAATTCGAATAGCTTTTAAAGGACCAACCAAGTTAATTTTAAGTAAGT
GAAAGAATAAAAGCAGAGACGACTTCTTGTGTGTCAAATCCAAGTTGTTT
GTATACCAAAAAAACCGGTAAGTAGCCGAAGTAGCATTGTTCTCTTCAGC
CTGTACCAGACTCTTCTTTGttgactgaaaagataacggGAGATATAAAA
AACGCCCGTGTGGCGGCGGGGTGGTACAGGCTATGTTCTCTTGAAAGTTA
TAAAGTTTAACTGTAAGTGGCGGGTTTCTCTCATACTCTTGCGAAAAAGT
TAAAATTCTTATCGTTCTGCGATTCAGACTTTTTTGTTTGTGTGGGGGAT
GGGGGCGAGAGGTTTCAAGAAATGCTTATTTATTCTCGGAAAACAAAACA
CTATATACTCTTCATTTCGCTCGCGGATGTGATTTTGATTTGAACGGTTT
GTGAACTGTGTGACTGGTACACCAATGTCGAAGATACTGGTATAAACGTT
GACACACCTTAGTCAGCTTTGgacctagacgatgctatcgtccgtgtaat
atattattatgatattacGATATTACATATTTGTATGCGGAAAAAAGAGT
CTATGTTTACGACATTGAGCCCCTCAGACTATTTTTCGCCCGCGCAGACT
AAATTTCCGCCCGACTGCTAATTTGCGTGTTTGAGGTTAATCTTTTATAT
TcgaattcgtcttagactatagaaTAGCCTACTTTGGACCGCGAGGCCGA
TTATTTTACATACTAATTTCAACAATaaccaaaaaataaatataatgtcT
TCCTTTCATTTATAGAGCTGTTTGTCAAAGCCGAACAAACCTGATAATCA
ATATGAAGTTTCTGGTGAAATTCTTTCTATTAACAACACTCTAGGTTCCT
GTCTTCGAAGCGAATGGGGCTGGAAACAACATCAACTGCCCACGAGGAGA
TCCCAAACTTTATTCACTCCCTTACCCTATGTTTAATTACATACCAAGTG
CACAGAATTTCCAGACCGCTAAATCGTGCGAGTTTGTGGACCTCAATAGT
GACGGATTCGTAGACTTCGCTTGCAGTTTTTGTGAGGGAGATGTACTTTC
ATATTGTCTTACAGATTCTCCTTTTTCTCACCCTCTACAATGTACCTACA
TGAACACGAAATGTGGTTGGGTTCTGGCTGAGGAATATAAATATGGAACT
GATTACTGTTCCTAATAGGCTGTTTTTGTCTTAGTTGTAAAGATgtctta
aatttttt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00067075-exon-scaffold_463-1491911889:45112..45228 | TCONS_00067075-exon-scaffold_463-1491911889:45112..45228 | Clytia hemisphaerica | exon |
| TCONS_00067075-exon-scaffold_463-1510915933:45112..45228 | TCONS_00067075-exon-scaffold_463-1510915933:45112..45228 | Clytia hemisphaerica | exon |
| TCONS_00067075-exon-scaffold_463-1575043694:45112..45228 | TCONS_00067075-exon-scaffold_463-1575043694:45112..45228 | Clytia hemisphaerica | exon |
| TCONS_00067075-exon-scaffold_463-1491911889:45927..46369 | TCONS_00067075-exon-scaffold_463-1491911889:45927..46369 | Clytia hemisphaerica | exon |
| TCONS_00067075-exon-scaffold_463-1510915933:45927..46369 | TCONS_00067075-exon-scaffold_463-1510915933:45927..46369 | Clytia hemisphaerica | exon |
| TCONS_00067075-exon-scaffold_463-1575043694:45927..46369 | TCONS_00067075-exon-scaffold_463-1575043694:45927..46369 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_463 | supercontig | scaffold_463:45112..46369 + |
Blast
The following BLAST results are available for this feature:
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