TCONS_00067072 (transcript) - C. hemisphaerica

Overview
NameTCONS_00067072
Unique NameTCONS_00067072
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1092

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00067072 ID=TCONS_00067072|Name=TCONS_00067072|organism=Clytia hemisphaerica|type=transcript|length=1092bp
TGAGATGACAGAGAAGACAATAATTTTACATTAAACAAAATGACACCTAC
gttagtttctttggtcttgCTGAAGACATCGGTCAGAACATGTAGAAGGA
CACTGCTGGCAGCTGCTTCTCTATTCGCTGACTTTACTTTCAATTCTGCT
GAAGAAGAAGATCGCAATATTATGGGTGTCGAAAAAACTATCATCACTGA
AGGAAGTGGAGAAACACCGCCAGCTGGCTCCAAAGTCCAAGTCCATTATG
TCGGAACCCTGATGGATGGTAGCCAGTTCGATTCTTCCCGAGACCGTGGA
AAGTATTTCGAATTCAAATTGGGTGCCGGTCAAGTCATTAAAGGATGGGA
TGAAGGCGTTGCCAccatgaagaaaaatgaaaaggcAGTGTTGACATGTT
CGCCAGATTATGCATATGGCGCCCGTGGCTACCCACCAGTCATCCCTCCT
AACGCCACCTTAAAATTCGAAGTTGAACTCTTTGGGTGGAAATAAAATGA
AGAAACGCATTATTTGGATGAACGGgtttctttttgtaaattttcagttt
tgtatTTAATTTGTAttcaccattttgcatcaccTCCCAGGCTAACTTTT
TAGTTGCAAGTTTTTAAtcctacaaaataaaatttccgattttcaaaaat
ttaatgtTCTCTTTCGTATACTTCCAACCTGAAAAACGTACTTCTCGTTG
TCTTGTTCTTGGccaaaaacaacttttcaaATTGTTGATTTCAGATCTCT
TTGCTGGTTGTTGGAAgccaatacactcttctcgagatgcataaatttat
tgttgtcctcgttttcaaacagatttcattgctatgaaattacatacttt
aatcgtagaaatctTACCGAGACTAATTTTGGCGTTTTAGTGAGTTTTCt
ctatttttgatgaaataaatctcgctaaaacacgtcgaatcgacagatcg
ctaaaatttatccgcgcgaaatttctggttatattgccttgatacgtttt
taattaaatatttccctactataggggaatatttattaaaacggcctttt
tccgtttcttcttcttcgtccattttcgatgttaatgttttc
Run BLAST on NCBI

protein sequence of TCONS_00067072-protein

>TCONS_00067072-protein ID=TCONS_00067072-protein|Name=TCONS_00067072-protein|organism=Clytia hemisphaerica|type=polypeptide|length=151bp
MTPTLVSLVLLKTSVRTCRRTLLAAASLFADFTFNSAEEEDRNIMGVEKT
IITEGSGETPPAGSKVQVHYVGTLMDGSQFDSSRDRGKYFEFKLGAGQVI
KGWDEGVATMKKNEKAVLTCSPDYAYGARGYPPVIPPNATLKFEVELFGW
K
Run BLAST on NCBI

transcript from alignment at scaffold_463:1669..15435+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00067072 ID=TCONS_00067072|Name=TCONS_00067072|organism=Clytia hemisphaerica|type=transcript|length=13767bp|location=Sequence derived from alignment at scaffold_463:1669..15435+ (Clytia hemisphaerica)
TGAGATGACAGAGAAGACAATAATTTTACATTAAACAAAATGACACCTAC
gttagtttctttggtcttgCTGAAGACATCGGTCAGAACATGTAGAAGGT
ATTTCAACCAAACATATTGATTTTTCACAGGTGTCAACAAAAAGATTTGA
CTTTGACTGTTTTTCTTGTAATCCTTCTTGAGACAAAACCCTGAAGGAAG
GTCTTGTACAAAATGCGAGACTTGATGAATAAGCTTTGTTTTGTTATCTT
CAACATGTAGCTCCACGTAATaatatgttttgaaaacattgGAGTGGGGT
TTGAATTTTCCGTTAATGTTTGTGTGAATGTGTATGATTGTCTTCAAAAC
CAAATTTCTGGAAAAGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNTCTAAAGCTCCATCAAATAGAAAACTTACTGTGTATCTTGAAGGAC
GATCGATTTCAATAAATCCATATATTCTTTTCAAAGACTGCTGGTGTTCT
TTTGAAATCGCTAAGGTATCAAGATTCTGTAAAATATGTTCGTCTTGAGG
TAGAATGGGATATAAAGGATGCCATAAGCTGTGATGTATTCCATTGGTCA
AACAAATATCAAACCACAAGTCACATTTCAACCCAGTATTTAAGTGAGAA
AACGCCTTAAATGAGCTAGAAAGGAGAGCTTTTTTTGCAGTTTGATTCAA
CGTTTTAACTTCTCTTGTTTCTTTGGATGAATGAAAAGAATTGAATATAG
CCAGGCTTGTATCAGCGTTGCCAAAGATCGTTTTCAGAATGTAAATATTG
CACGCCAAAATGAAAATCATACAGATGATGGCATAGAGATATCGCCATCG
TAAATTCATCCTCTTTCAACAAATCCATGGAGATGCagctgaaaaaaaag
agaaaacgaaTCTTTAAGTCCCTTAATGATAAATACAGTACTCTTATAAA
TTGGATAATTATTATAATTCAAAATTgccaatttgaaagaaatttagcaa
aataaaTAAGAGACTCTAATAGTTCTCATCTGGTTACTCGGAAGAaaata
aattccaaataaatgcatattttgtgaatttgaaattaaaatagtTGAAT
AAAAAGAATAACACAGTAATGAGGTgcatttcttttcttctttatatTAT
AATGAACATTTCCGATGGTAAGATGATTATGTATAGTTCACTTGGAAATT
CGATGTATGACTACTCCAATTTTGATacatgttttaattttattttatct
agATATTCAATTCAACTAAATATATTGCTAAGTAAAATCTCTATCTCCCT
ATTTGTATAGCAACTATTCTATACCAGCTTGAAACCAATGTTAATAGTTC
CAAAGCTTTTTTANtttaacattttcaattcaactaaatatattgttttt
aacattttgatttttggaaaatacatatttaTGAAGCACTACAACTGTAT
TGTGCACTCTTTGGATGTTTGCTACGCATTATTCATTGATAAATATATTG
CTAAGTAAAATCTCTATCTCCCTATTTGTATAGCAACTATTCTATACCAG
CTTGAAACCAATGTTAATAGTTCCAAAgcttttttaataaaagataTTCT
ACTTACTGCTACTTAAAGAACTGCACATCACTACATATCCTTTTGTCTCA
GGCAAGCTGATCAAACTTTCTAACCTTCAAAGAGTCAAAACCGCGGCTCC
GGCTTGCTTCGATCAAGAATTTAAATCACATGATCTTCTGATAAAAACTT
GGTAACTCGTTACTGGGAAATTAAATGCTTTTGGAAAACAAAATATACAG
TACAAAGAAAAGTTTCTATGACACAAAATTGTCATAAAATTAagtgacat
tttgatttttgagttttaataaaagtttttatttaatggTTTGCtcttca
aaagttttcccctGTCTAGCTTTTTTGGCTTCCTTTTTCAAATTACAGTG
AAAACAGCTTTCGTTCGATTACAATTATGTTCTATGAGAATTGTGTtcgt
tagagctttttagcctGGGCGTCCAAGCCCTTAAGTAACTGTAtaaaagc
gaataaaatctaatacaattgaaacAATTGAACGttatcgaacacaatcg
aatacaatcgaacataatttttgaagcaatcgaatggcaaatcctgggta
ccgtcaactgctctaacttgggactatctgacaaaacatgagACGGCAAT
TCGACCACCAtccaatgggattaacaaatagcgagtATGTAACTTGCCGc
acaagtgacgtcaaacgctccatcgttttgccactaatttggtcttcttc
attCTGGATGGACACTTgcgcgtgttccactacggattttttcatatttc
gatttaaaagcctttggtacgaaagagaaatcgtgtattttttaatatgg
ggttcattaaactcaaatcaaatgactttggaggttcggtgaaatggtga
tGGAAtacacaagtgtttcaaccggtattccaacaaagccacattttggt
ttgtacagaaattttgcccgcGCAAATCAtcacaacaaaatggtcaatct
cactaaagcaaaacattgcggccacgacatttccctggataaaaattctg
gtcacgtgaccatccgtgattttataccaatgaaaacgcttcatttccct
ggattaaagttgtgtctacactaacaggcgggaaatggctagaaaaagag
agacaAAACTGgcggtcaaattaaatttttctcctttcttgcggcaaaca
taaaagactttaagagaccatatttatttaagaaagaggtattatatcat
aaataaattatgtaagtaagtgatattctaaataaaaagttcattaacaa
ttttattttgaagtttgtttttaaaaacaaaacccctgtgctagatgata
atctcattttcttaacttatggacccatttggaagtatttgtaatacaga
tcatttggcagtgtagttgcagcctttatatacaagaattggaatctaaa
gtctgaagtcgtaacttccttgccagtgaccccgcagagaaatttttagt
tgacagacactgactttaggttggtttggaaatcgttttattttgaaata
caaCAACCTGTCATATGAAATGCACATTCAAACAATCACTGACAGAGTCA
AGGGTATAAGTGCCTGGATATACAGAACCTTCAAGTCCAGAGATAAATCA
GTAATGATCACTCTTTGGAAGACATTGGTACTTCAACATCNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNccagccataaaaacaatgatagagccatg
cataattactgtatcatgcatattgtataTAGTGATTATGcttggtttta
tcattgtttttctgctggactacataattattcaacagggtggcctattt
gaaaaaaaggtctatccaatgtgttaccaagaaaaatatgtgacatgacc
aaatgttccaaaaattccttcaaaaaacaacttgatcaatttctgCATGA
TGTTCCCGACCAGCCACTGCTCCCTGTCTATCTCCCTTACAGGATGGCTG
ACTCGAatacgaccctggacaccgccgtacattgtacggtgtTGTACGGT
GGGTGTACGGTGGGTACGGTGGGGTGTACGGTGGATTTCGAGTTAACCTA
TTTCACCACCGTAccaaattgatttcagtttcAGAAAGCATGCAAAGTTT
TAGATATTCAACTGTGGTCCGACTTACTGAAAAACTTCTAAGTCGGAAAA
ACTTTCTGTGGTACATTAAGTTTGACCACGGAACTTGTCTATCGCGATCT
TATTCCCACCGTACTATTGTACGGTTGGAAATTTAATGTACAGTGGGAAA
ATGTACGGTGTTTTCATAGTTAACCTTTAATTCCCACCGGACATTTAAAT
CAAGCCCCACCGTACAacaccgtacaatgtacggcggtgtccagggtcgt
actcgaattcaattgttgaaatggtcaaacaccgGACCCCCCGGGTTGAG
AGAgcagagaatttgctgaaacacatcaaaggtaatcaaaggtaagtgaa
atgtaatcttcactttagatgaatactttaatttatttggattcatgaaa
ggttcaaggtttgtttactttttatgtcaaattatttcattggttTATTG
AGCTataatagctgattgaaaaacaaagatttttgatagttatcagcgtg
ggcttggctgNGCCAAATTCTAACTATGGTGAAGGGGAAGGCGGTATTTA
TTCATATACAAACCAACGCCTGGGAAGAAAATGCCACCTCAAACCAGTGA
ATACAACGAACAAGAACATTTNCCTCCTGTACttggcaatttagaggttg
ttcgtaattcgcgatttggcttacgcgtaacacttgtggtGAATagccgt
cccatgttgcgtaatgTAAGTTAGTCCCAAGCTGGAGCAGGGGACGGTAC
CTGGAATATTTCTAGCTCTTAATTGTGTATaattacaaaatgaaaaagtg
attggaatttaaaaaattttctagattttgagTGGCTGTGACTTGATGAT
TCAACACACACCCACACCCACACGCACCTGCCAAAAAcactgtaaaaaaa
acaaaaatNttccagccataaaaacaatgatagagccatgcataattact
gtatcatgcatattgtaatgaTTATGCTTGGTTttcgcgcgctcaagggg
aaaaggaaagtgatcgatattctttgaaggaaaaacgtcagaaacaaacc
caaagaccaaaagatgtattttgttgttgacaatcgNATTCAACACACAC
CCACACCCACACGCACCTGCCAAAAAcactgtaaaaaaaacaaaaataaa
aaaattacaaacaactcACCTTCATATATATAGTCTAATCGTTTATGAGT
AAAATAGCAACTACGTGGATAAATATAGTTCAACCAGCTGTTGTTAAACT
ACTtcctaatcttaatttttttgtcgTGTAAGTGTGATCTGATGATCAGA
CATTGTTTCCTTTCTCCGCCATTCTTTCGCCATTcacacttcattttttt
ttttgattttgttaatCCGATTTCTAACATTGTACCCGAATAACAATCCC
GTTTAATCTTTGGCGCcataatgacgtcatatttcATGCgggaaaaatac
caaaaaatggtCACTTTCACTAGCATTCGAAATTGTTAGAATGGAGCTAT
GATTCTCTTTAGCAAGCAACCACGAATGTAGAGCATCTCCCGCGGGCTTC
ATGGTTTTCGAGTAAATTTTTAAGTTCTTTTTCTCTTCGCAAGGACACTG
CTGGCAGCTGCTTCTCTATTCGCTGACTTTACTTTCAATTCTGCTGAAGA
AGAAGATCGCAATATTATGGGTGTCGAAAAAACTATCATCACTGAAGGAA
GTGGTATGTATTGTAAATTATTTAAGTCATTCTTGTTGTCCTCAACCAAG
GGCAATGTATTGATGTTAACTCTGTCCCCTCATCCATCAGGCGACTCTGT
GACCCACAATCCACAGTGGTTGGGCTCAAACTTTTTTGGGCAacatttct
cagtacagccctcactaattTGTCATTATTATATTTGTTTCTTTTCTGAC
TTCCGTTGGGTGGACAGGGCAAAATTTTTCCTAAGCTGGCAACAAAAGTC
CATACGGTACTAATCGATAAGGCGGCGCGGTCAtcaaaaaaatgctctgt
tcgcgtcgcaacgggtgttcaaaatgcatgcgggcggacgggNATTTGAT
TATagaagtaattgataatgttaatgatcgaagtaatcgaatgACCAttt
atcgattaacaatcgaatttgataacaaaattagttttagtttttttagt
tttagttttatATTTGCATAAGACAAAAAATGCCTAATCTCccaaattaa
aattaaattgtgAGTCCTTGATCACTTTCttaaggcggtcatcgaaataA
TGCTCTGTTCGcatcgcaacgggtgttaaaaaatgcatgcgggcggacaa
aaacattcccgggttttttttaatcaaaccagTAAaatcaggggcgggtg
gtaacgcgagcaagACAAAATTTCGATGGTCGTCatagagcaattgagaa
aaagctatactttaaaagaacaaattgcttttcccagatttttttccgca
tctccgcaccggaaaatagCGGAAAATTTGTGGCGGGCGTGTGACGCAAA
TAAAACAATTGCCGTTgaagtactttgattgttattgattactttcgata
actttgacaacttcgataaccaattgattGCTTCATTAACCAATTACTAT
GACATATctttaaagggacccctcgcttaaaaatgataacaagacaCTCA
CTTCATAATCACATGAAAAGAAACTTCCCAAAGTATTACCATGCAAAACT
CTTTCTTCGCTCcataattataaattttgatgttcactcaACTCAGAAAT
TTCAACTGGCTTCTGAAGGCCTTAGAGTTTTCTCGCCCTCTTGTCGCACC
AAGTTGTCAACACAATGCGCCAGGAAATTACAGTACGAGTGTAGAGGCCA
GCTCTGGTTCGACCAGTCTATAATCCGCGCTCTTCTCCTAAGAAAAACCC
TTTGCGCGGAGTCGAGCTGCGGGTTTATGGAGAATCGGTATCGGCTTCAG
AACTCCCAATGAGCCCCGGttgtgttggtttcagtcagacgGAGACGCCA
TACTGTTTTCAGAGCAATTTTTCGAATATGTTGTTCGGGGTTTTTGGACG
AATATAGTTTGATTTCCTAAAGATAACAAACAAGCAAGGggtcactttaa
aaaaaaaactaaaaaaaactgacctaaaaccaaagcacaaaaagaagacC
TGTCATCCTAAAGATTGACGTCCTTATTTCCCACCCACTTTGCCTGCCAT
TTTGTGTGCCTTtgccctgggtttcctcaagtaactcGTATTGcgcattc
tgattggtcggagaaGATGAAAGTGGTTTTTGTGTGttctgattggtcgg
agaaaacaaaagtggttttTGCGCCTGAACGCGTGTTTTAATTGGCCAAA
ATAaacttggtttcagattattttgacgcGCTGCTACTGGAAAcgtattc
aatatgatcgaaagTGATTGAAAGTAATCAAACAGTAATCAAAACGATCA
AACGAATCGAAAATGGTTGATAAAAATGCCATGATTTAGAGTTgagtgag
tattcgatcactGATAGAATCGATAAGTGGTCTTATTAATGATTATAAAA
AAGAATGGATGACTTTGCTGTCGATGTCTTGAATCATGATGAGAAATAAG
AGTGGGCTGGGTACTAACCCTTGTAGAACACCTGATAACTTTGTTTCTGC
CGACAAACTTGAAATTACTGAGACTCTTCGAGTTTGATTTGTCAGAAAAG
ATCGGATACATAGACCTTTTCGCAAATTTCAACATCACTTGCATCGTTTT
CAAACAATTACTATGGTGATtgtgtcccttgagacattgaatgatttttt
tatgaaaagaaaataaattaaaatccgCGTTAATCACCATGGCAATAATT
TCCAAACGAGGCAAATGATGTTCGTTGACGTAATTTATGAAAAGGTCTAT
TTGGGGAGTTTTCAAGATATTTAATTTCTGTGGAGTTTATGCAATAAGAT
TGTATGATCCACCCAGTTAAGGGCTTTGCTAAAGTCAAGGTATACGATGT
CACTATTGTTTCCTTTTACTATGTAGTGGATCAACTGTTTCCTTTTTTAT
CTTGGTTGATTTTTCGCATTTTATAGCAATTAAAAGGCTGGGAAAAGCAT
CTGAATAATATAATAATAATCAGAAATGAAAAATGAATTTGTAAATAACT
GATGTCACAGTAAATAAAAATATAATTAATTTACTTCTTTTTTTTTCAGG
AGAAACACCGCCAGCTGGCTCCAAAGTCCAAGTCCATTATGTCGGTGAGT
TTATGTAACGCTTAAAAGTCCTGTCTGAATTTGAACGCTATGTATCAACT
AGTCTAGATCTAGACTACTAAAACTTTATACTTAAAAGCTACTAAGATTA
TTTCAAACTAAAAAGAGACGCGCTCCAGAGAGAGGAAGAATTATTATTGT
GTAAACTCTCTCACGCCCAGTTTTTTTATGACAGACATACTCTCTTTCCA
TACATAGCTTCAGCCCCCCTTACTTTCGGGGGGGCTAAAAAATATTTTGG
CCTTTAAAGACCTTTAGTGTTAGGGGACCTAGCACAAGGCAAATTTTTGG
GGGAAGGCAGAAACCTGGCTGAAGCTATATGCTTTCAGCTTTGTGACAGC
ATAGTCCGTATAAAAAACCCTGGTCTGGAAGCCTTTTGTCTCTTTCCATT
GTTTCTTACTTGAACTTGCGTTTGAGAaattagtttgttttgctcacttt
ttgatcatgtgattttAATCTTAAACCAATTCCAAGAGGAATACTTGGta
atgtgatcaaaaactgagcaaatagatttttatcttttgtaattaacaaa
ggaaaaagctaacaaaaagttaaaacaataagcttccagaccagagtttt
ttatacggactatggtgaCAGAGCTACccttataccttatcgggggaaag
tgaagaaaattgagggatgacgaaatttttccccgacattttatcacccg
accaaaccTTGTACCTGATTTTTTTTTATCCCCAACCAAAACATTTACCG
GAAATTTTATaccgcaaccaaaattcaaatctaatttcTTTACACCTTGA
TTTACCAAAATTGATTAGTGCTTTAAACATCAAATTACAAGGCCAATTTT
CAAGCTAGTAAAGATaaccatttcttttggacagtttagtcTGGTGAANA
ACTAAAAAAAACtgacctaaaaccaaagcacaaaaagaagacCTGTCATC
CTAAAGATTGACGTCCTTATTTCCCACCCACTTTGCCTGCCATTTTGTGT
GCCTTtgccctgggtttcctcaagtaactcGTATTGcgcattctgattgg
tcggagaaGATGAAAGTGGTTTTTGTGTGttctgattggtcggagaaaac
aaaagtggttttTGCGCCTGAACGCGTGTTTTAATTGGCCAAAATAaact
tggtttcagattattttgacgcGCTGCTACTGGAAACGTATTCAATATga
tagaaagtgattgaaagtAATCAAACAGTAATCAAAACGATCAAACGAAT
CGAAAATGGTTGATAAAAATGCCATGATTTAGAGTTgagtgagtattcga
tcactGATAGAATCGATAAGTGGTCTTATTAATGATTATAAAAAAGAATG
GATGACTTTGCTGTCGATGTCTTGAATCATGATGAGAAATAAGAGTGGGC
TGGGTACTAACCCTTGTAGAACACCTGATAACTTTGTTTCTGCCGACAAA
CTTGAAATTACTGAGACTCTTCGAGTTTGATTTGTCAGAAAAGATCGGAT
ACATAGACCTTTTCGCAAATTTCAACATCACTTGCATCGTTTTCAAACAA
TTACTATGGTGATtgtgtcccttgagacattgaatgatttttttatgaaa
agaaaataaattaaaatccgcgagttaatcaccatggcaataatttccaA
ACGAGGCAAATGATGTTCgttgacgtaatttatgaaaaggtctatttggg
gagttttcaagatatttaatttctgTGGAGTTTATGCAATAAGATTGTAT
GATCCACCCAGTTAAGGGCTTTGCTAAAGTCAAGGTATACGATGTCACTA
TTGTTTCCTTTTACTATGTAGTGGATCAACTGTTTCCTTTTTTATCTTGG
TTGATTTTTCGCATTTTATAGCAATTAAAAGGCTGGGAAAAGCATCtgaa
taatataataataatcagaaatgaaaaatgaatttgtaAATAACTGATGT
CACagtaaataaaaatataattaatttacttctttttttttcaggagaAA
CACCGCCAGCTGGCTCCAAAGTCAAAGTCCATTATGTCGGTGAGTTTATG
TAACGCTTAAAAGTCCTGTCTGAATTTGAACGCTATGTATCAACTAGTCT
AGATCTAGACTACTAAAACTTTATACTTAAAAGCTACTAAGATTATTTCA
AACTAAAAAGAGACGCGCTCCAGAGAGAGGAAGAATTATTATTGTGTAAA
CTCTCTCACGCCCAGTTTTTTTATGACAGACATACTCTCTTTCCATACAT
AGCTTCAGCCCCCCTTACTTTCGGGGGggctaaaaaatattttggccttt
aaagacCTTTAgtgttaggggacctagcacaaggcaaaTTTTTGGGGGAA
GgcagaaacctggctgaagctataTGCTTTCAGCTTTGTGACagcatagt
ccgtataaaaaaccctggtctggaagccttttgtctctttccattgtttc
ttacttgaacttgcgtttgagaaattagtttgttttgctcactttttgat
catgtgattttAATCTTAAACCAATTCCAAGAGGAATACTTGGtaatgtg
atcaaaaactgagcaaatagatttttatcttttgtaattaacaaaggaaa
aagctaacaaaaagttaaaacaataagcttccagaccagagttttttata
cggactatggtgaCAGAGCTACccttataccttatcgggggaaaGTGAAG
AAAATTGAGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTGCTCAGAGtcttttt
agatttagattctATTTATTTGATGAATTTCATCTGTAACATTCCGGAAT
GACGTATTTTTCCTGCTGTTTTTTTTAGGAACCCTGATGGATGGTAGCCA
GTTCGATTCTTCCCGAGACCGTGGAAAGTATTTCGAATTCAAATTGGGTG
CCGGTCAAGTCATTAAAGGATGGGATGAAGGCGTTGCCAccatgaagaaa
aatgaaaaggcAGTGTTGACATGTTCGCCAGATTATGCATATGGCGCCCG
TGGCTACCCACCAGTCATCCCTCCTAACGCCACCTTAAAATTCGAAGTTG
AACTCTTTGGGTGGAAATAAAATGAAGAAACGCATTATTTGGATGAACGG
gtttctttttgtaaattttcagttttgtatTTAATTTGTAttcaccattt
tgcatcaccTCCCAGGCTAACTTTTTAGTTGCAAGTTTTTAAtcctacaa
aataaaatttccgattttcaaaaatttaatgtTCTCTTTCGTATACTTCC
AACCTGAAAAACGTACTTCTCGTTGTCTTGTTCTTGGccaaaaacaactt
ttcaaATTGTTGATTTCAGATCTCTTTGCTGGTTGTTGGAAgccaataca
ctcttctcgagatgcataaatttattgttgtcctcgttttcaaacagatt
tcattgctatgaaattacatactttaatcgtagaaatctTACCGAGACTA
ATTTTGGCGTTTTAGTGAGTTTTCtctatttttgatgaaataaatctcgc
taaaacacgtcgaatcgacagatcgctaaaatttatccgcgcgaaatttc
tggttatattgccttgatacgtttttaattaaatatttccctactatagg
ggaatatttattaaaacggcctttttccgtttcttcttcttcgtccattt
tcgatgttaatgttttc

Coding sequence (CDS) from alignment at scaffold_463:1669..15435+

>TCONS_00067072 ID=TCONS_00067072|Name=TCONS_00067072|organism=Clytia hemisphaerica|type=CDS|length=1824bp|location=Sequence derived from alignment at scaffold_463:1669..15435+ (Clytia hemisphaerica)
ATGACACCTACgttagtttctttggtcttgCTGAAGACATCGGTCAGAAC
ATGTAGAAGGACACTGCTGGCAGCTGCTTCTCTATTCGCTGACTTTACTT
TCAATTCTGCTGAAGAAGAAGATCGCAATATTATGGGTGTCGAAAAAACT
ATCATCACTGAAGGAAGTGGAGAAACACCGCCAGCTGGCTCCAAAGTCCA
AGTCCATTATGTCGGAACCCTGATGGATGGTAGCCAGTTCGATTCTTCCC
GAGACCGTGGAAAGTATTTCGAATTCAAATTGGGTGCCGGTCAAGTCATT
AAAGGATGGGATGAAGGCGTTGCCAccatgaagaaaaatgaaaaggcAGT
GTTGACATGTTCGCCAGATTATGCATATGGCGCCCGTGGCTACCCACCAG
TCATCCCTCCTAACGCCACCTTAAAATTCGAAGTTGAACTCTTTGGGTGG
AAATAAATGACACCTACgttagtttctttggtcttgCTGAAGACATCGGT
CAGAACATGTAGAAGGACACTGCTGGCAGCTGCTTCTCTATTCGCTGACT
TTACTTTCAATTCTGCTGAAGAAGAAGATCGCAATATTATGGGTGTCGAA
AAAACTATCATCACTGAAGGAAGTGGAGAAACACCGCCAGCTGGCTCCAA
AGTCCAAGTCCATTATGTCGGAACCCTGATGGATGGTAGCCAGTTCGATT
CTTCCCGAGACCGTGGAAAGTATTTCGAATTCAAATTGGGTGCCGGTCAA
GTCATTAAAGGATGGGATGAAGGCGTTGCCAccatgaagaaaaatgaaaa
ggcAGTGTTGACATGTTCGCCAGATTATGCATATGGCGCCCGTGGCTACC
CACCAGTCATCCCTCCTAACGCCACCTTAAAATTCGAAGTTGAACTCTTT
GGGTGGAAATAAATGACACCTACgttagtttctttggtcttgCTGAAGAC
ATCGGTCAGAACATGTAGAAGGACACTGCTGGCAGCTGCTTCTCTATTCG
CTGACTTTACTTTCAATTCTGCTGAAGAAGAAGATCGCAATATTATGGGT
GTCGAAAAAACTATCATCACTGAAGGAAGTGGAGAAACACCGCCAGCTGG
CTCCAAAGTCCAAGTCCATTATGTCGGAACCCTGATGGATGGTAGCCAGT
TCGATTCTTCCCGAGACCGTGGAAAGTATTTCGAATTCAAATTGGGTGCC
GGTCAAGTCATTAAAGGATGGGATGAAGGCGTTGCCAccatgaagaaaaa
tgaaaaggcAGTGTTGACATGTTCGCCAGATTATGCATATGGCGCCCGTG
GCTACCCACCAGTCATCCCTCCTAACGCCACCTTAAAATTCGAAGTTGAA
CTCTTTGGGTGGAAATAAATGACACCTACgttagtttctttggtcttgCT
GAAGACATCGGTCAGAACATGTAGAAGGACACTGCTGGCAGCTGCTTCTC
TATTCGCTGACTTTACTTTCAATTCTGCTGAAGAAGAAGATCGCAATATT
ATGGGTGTCGAAAAAACTATCATCACTGAAGGAAGTGGAGAAACACCGCC
AGCTGGCTCCAAAGTCCAAGTCCATTATGTCGGAACCCTGATGGATGGTA
GCCAGTTCGATTCTTCCCGAGACCGTGGAAAGTATTTCGAATTCAAATTG
GGTGCCGGTCAAGTCATTAAAGGATGGGATGAAGGCGTTGCCAccatgaa
gaaaaatgaaaaggcAGTGTTGACATGTTCGCCAGATTATGCATATGGCG
CCCGTGGCTACCCACCAGTCATCCCTCCTAACGCCACCTTAAAATTCGAA
GTTGAACTCTTTGGGTGGAAATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_041911XLOC_041911Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00067072-exon-scaffold_463-1491911889:1669..1766TCONS_00067072-exon-scaffold_463-1491911889:1669..1766Clytia hemisphaericaexon
TCONS_00067072-exon-scaffold_463-1510915933:1669..1766TCONS_00067072-exon-scaffold_463-1510915933:1669..1766Clytia hemisphaericaexon
TCONS_00067072-exon-scaffold_463-1575043694:1669..1766TCONS_00067072-exon-scaffold_463-1575043694:1669..1766Clytia hemisphaericaexon
TCONS_00067072-exon-scaffold_463-1491911889:8212..8321TCONS_00067072-exon-scaffold_463-1491911889:8212..8321Clytia hemisphaericaexon
TCONS_00067072-exon-scaffold_463-1510915933:8212..8321TCONS_00067072-exon-scaffold_463-1510915933:8212..8321Clytia hemisphaericaexon
TCONS_00067072-exon-scaffold_463-1575043694:8212..8321TCONS_00067072-exon-scaffold_463-1575043694:8212..8321Clytia hemisphaericaexon
TCONS_00067072-exon-scaffold_463-1491911889:10818..10862TCONS_00067072-exon-scaffold_463-1491911889:10818..10862Clytia hemisphaericaexon
TCONS_00067072-exon-scaffold_463-1510915933:10818..10862TCONS_00067072-exon-scaffold_463-1510915933:10818..10862Clytia hemisphaericaexon
TCONS_00067072-exon-scaffold_463-1575043694:10818..10862TCONS_00067072-exon-scaffold_463-1575043694:10818..10862Clytia hemisphaericaexon
TCONS_00067072-exon-scaffold_463-1491911889:14597..15435TCONS_00067072-exon-scaffold_463-1491911889:14597..15435Clytia hemisphaericaexon
TCONS_00067072-exon-scaffold_463-1510915933:14597..15435TCONS_00067072-exon-scaffold_463-1510915933:14597..15435Clytia hemisphaericaexon
TCONS_00067072-exon-scaffold_463-1575043694:14597..15435TCONS_00067072-exon-scaffold_463-1575043694:14597..15435Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00067072-proteinTCONS_00067072-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_463supercontigscaffold_463:1669..15435 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.22003	1.23232	2.12037	0.677764	77.13	55.3352	150.64	182.793	207.098	250.354	295.616	271.87	340.577	386.013	0	0.287782	0.639526	0	1.92683	0	0.52499	0	0.666061	1.82102	560.009	582.924	2.261	1.5872	0.622654	0.636416
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001179PPIase_FKBP_dom
Blast
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BLAST of TCONS_00067072 vs. Swiss-Prot (Human)
Match: FKB1A (Peptidyl-prolyl cis-trans isomerase FKBP1A OS=Homo sapiens GN=FKBP1A PE=1 SV=2)

HSP 1 Score: 121.324 bits (303), Expect = 4.398e-33
Identity = 60/105 (57.14%), Postives = 73/105 (69.52%), Query Frame = 1 
Query:  172 MGVEKTIITEGSGET-PPAGSKVQVHYVGTLMDGSQFDSSRDRGKYFEFKLGAGQVIKGWDEGVATMKKNEKAVLTCSPDYAYGARGYPPVIPPNATLKFEVELF 483
            MGV+   I+ G G T P  G    VHY G L DG +FDSSRDR K F+F LG  +VI+GW+EGVA M   ++A LT SPDYAYGA G+P +IPP+ATL F+VEL 
Sbjct:    1 MGVQVETISPGDGRTFPKRGQTCVVHYTGMLEDGKKFDSSRDRNKPFKFMLGKQEVIRGWEEGVAQMSVGQRAKLTISPDYAYGATGHPGIIPPHATLVFDVELL 105
The following BLAST results are available for this feature:
BLAST of TCONS_00067072 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FKB1A4.398e-3357.14Peptidyl-prolyl cis-trans isomerase FKBP1A OS=Homo... [more]
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