Sequence
The following sequences are available for this feature:
polypeptide sequence
>TCONS_00067072-protein ID=TCONS_00067072-protein|Name=TCONS_00067072-protein|organism=Clytia hemisphaerica|type=polypeptide|length=151bp Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following
gene feature:
This polypeptide derives from the following
transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
Term Definition
IPR001179 PPIase_FKBP_dom
InterPro
Analysis Name:
InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
M T P T L V S L V L L K T S V R T C R R T L L A A A S L F A D F T F N S A E E E D R N I M G V E K T I I T E G S G E T P P A G S K V Q V H Y V G T L M D G S Q F D S S R D R G K Y F E F K L G A G Q V I K G W D E G V A T M K K N E K A V L T C S P D Y A Y G A R G Y P P V I P P N A T L K F E V E L F G W K 20 40 60 80 100 120 140 Expect = 1.2E-46 / Score = 157.8 Score = Expect = 1.8E-33 / Score = 114.7 Score = 30.559 Sequence G3DSA:3.10.50.40 SSF54534 PF00254 PS50059
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available GENE3D 3.10.50.40 coord: 28..151 None No IPR available SUPERFAMILY 54534 FKBP-like coord: 46..150 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain PFAM PF00254 FKBP_C coord: 59..147 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain PROSITE PS50059 FKBP_PPIASE coord: 63..151
Blast
BLAST of TCONS_00067072-protein vs. Swiss-Prot (Human)
Match:
FKB1A (Peptidyl-prolyl cis-trans isomerase FKBP1A OS=Homo sapiens GN=FKBP1A PE=1 SV=2)
HSP 1 Score: 120.939 bits (302), Expect = 1.975e-36
Identity = 60/105 (57.14%), Postives = 73/105 (69.52%), Query Frame = 0
Query: 45 MGVEKTIITEGSGET-PPAGSKVQVHYVGTLMDGSQFDSSRDRGKYFEFKLGAGQVIKGWDEGVATMKKNEKAVLTCSPDYAYGARGYPPVIPPNATLKFEVELF 148
MGV+ I+ G G T P G VHY G L DG +FDSSRDR K F+F LG +VI+GW+EGVA M ++A LT SPDYAYGA G+P +IPP+ATL F+VEL
Sbjct: 1 MGVQVETISPGDGRTFPKRGQTCVVHYTGMLEDGKKFDSSRDRNKPFKFMLGKQEVIRGWEEGVAQMSVGQRAKLTISPDYAYGATGHPGIIPPHATLVFDVELL 105
The following BLAST results are available for this feature:
BLAST of TCONS_00067072-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (
Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens) )
Total hits: 1
M T P T L V S L V L L K T S V R T C R R T L L A A A S L F A D F T F N S A E E E D R N I M G V E K T I I T E G S G E T P P A G S K V Q V H Y V G T L M D G S Q F D S S R D R G K Y F E F K L G A G Q V I K G W D E G V A T M K K N E K A V L T C S P D Y A Y G A R G Y P P V I P P N A T L K F E V E L F G W K 20 40 60 80 100 120 140 Expect = 1.98e-36 / Id = 57.14 Sequence FKB1A
Match Name E-value Identity Description
FKB1A 1.975e-36 57.14 Peptidyl-prolyl cis-trans isomerase FKBP1A OS=Homo... [more]
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