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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00067058 ID=TCONS_00067058|Name=TCONS_00067058|organism=Clytia hemisphaerica|type=transcript|length=1837bp
TTAAAATCAGCTAAGAAAGATCTAAAAGTCTTATCATACTCATCGAAAAT
CGGAAAGTCATCGTGGTCAACGTTTAGGTGATTCATATGATCTCAATACA
AATAGTTTGTACGATAAACATCAATGTGATTGGCTCATAAACAAAAGAGG
AGCAGTCGTGGACGTTTTCAATAGTCACATCGTATCCGACACAAGGTTGG
TGGTTATCTGAAGAGCGGCCATCGGTTTAAAAATCGATTGAATCCATGTT
GGACGCTGCTATAGACGTTTGGTTTCCACAAATAATCAAATCAGAGCATT
AGTAATTAAGTTGCTTGGGTTTGATTTAACATGTGGTTTCTATACAACGT
TTGTTCATTATTGTTCATGATTCGGGGCGTGGCTGACGGTAATTTGGGTA
TCAATAAATCATAAGTTATAGTTTGAAAAATGGGTAAgcaatcaaatttt
aatttgatgaaAGGCTGCTCGCAAGCAGGTGTATCAAGTTTCAGTGAAAG
GTGCATACATTTGAAGAGTTTGAAATCAGCTacagtttgttttcaattca
caaagattgtttgttattgttataATTTATGTCCATTGTACCGTCGATAG
TGCGGCAACTAACTAAACGAGGAAATAATTGTCGTAGTTTTTCAAGTAAA
TCGTGGATTAATGCCTCAGCTGCCACTCGCCCAATGTCCGAACGTCCCGA
GAGGAAAATTGATTCGATAAATACGGTCGAAATAGTTGGTTTCTTGTCGT
ACATCGCTGCCAGACGTTCATTTTAGATTCTTAAGGCGATAATTTGAACT
TCTAGGTTTGTCTGAGCTTGGAATTGTGCGAAGGTAAACGCAACTAGGCA
AGCTAAGACAAAATGCAGAGTTTGTATATCGCTGAAAGAACTTGTAAGTG
GACTTGAGGTATTGAACTATGTCAAACTGTTCTAACAAGAACCACACCCA
CCATAGCGATTAAACAATTCTCCAACAATACAGAAAGTGTTTCATATTCT
ATTCAAGTACTCAGCATTCAAACAATTCGGTTCGATTTTCAGCTGTTGTA
TGTTGTAAATGTTGAAATTGTCgttgtattttttaaaaagttcggttttt
gaatttttccattttttcataGTACCTCTCCCTTATAATCTATCTCTCCA
TCAGGCTCATCATCTAAAGTTGAGCCCCCAGATGTCGTGGTGCGCCAGCC
GGTTACTAATGCTGGGCCCACGGCAacaacatttttatttaaaagttttt
ccccGGATTTCGGCCTGACTGCCGTTAGAAGACAGGAGATGGAGTTCATG
GAGTAGATCAAGGTGGGAGACACAAAATGTTGAAGTCTAATTTCATTCGA
TAACTCATTATACAATATCCAAACATACAGTTCCATAAAGCATAAAAATT
CAATAACGTTCAACACTTCGAGAAGACGGGAACGCACGATCGACTCTGCC
TAGCCGGTGTCATTTCCGAACGAACTCTTTACTCTTCCTGGTACCTGGAT
CTCTTCTCTCATGTTGATAACTCCCCGACGGGAGGACTTGCCTCGCCCGA
GGCTAAAAGCGAAGTGTTTTTTCTCCTAATAGAATTCCTATCTAACGTAC
TCAAGGTGAGCTTCCATTCAATGGTTACCATAACTACGAacataaacaat
aaaattgcgGAACTATGTCCTCATGACACTGTTTTAGCCACTGCATATAT
TAATCCTTACAGCTTTCACCCTTCCCAAAGTTTTTCATTGTAGTTAGATA
TTCACCCAacttaaaaatttacaaaagtttAGTCTAAAGATAGTTAAAAA
AAGTAATGTCTCTAGACAGAAGACCTGCATTAaaatt Run BLAST on NCBI transcript from alignment at scaffold_462:824268..826104 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00067058 ID=TCONS_00067058|Name=TCONS_00067058|organism=Clytia hemisphaerica|type=transcript|length=1837bp|location=Sequence derived from alignment at scaffold_462:824268..826104 (Clytia hemisphaerica)
aatttTAATGCAGGTCTTCTGTCTAGAGACATTACTTTTTTTAACTATCT
TTAGACTaaacttttgtaaatttttaagtTGGGTGAATATCTAACTACAA
TGAAAAACTTTGGGAAGGGTGAAAGCTGTAAGGATTAATATATGCAGTGG
CTAAAACAGTGTCATGAGGACATAGTTCcgcaattttattgtttatgtTC
GTAGTTATGGTAACCATTGAATGGAAGCTCACCTTGAGTACGTTAGATAG
GAATTCTATTAGGAGAAAAAACACTTCGCTTTTAGCCTCGGGCGAGGCAA
GTCCTCCCGTCGGGGAGTTATCAACATGAGAGAAGAGATCCAGGTACCAG
GAAGAGTAAAGAGTTCGTTCGGAAATGACACCGGCTAGGCAGAGTCGATC
GTGCGTTCCCGTCTTCTCGAAGTGTTGAACGTTATTGAATTTTTATGCTT
TATGGAACTGTATGTTTGGATATTGTATAATGAGTTATCGAATGAAATTA
GACTTCAACATTTTGTGTCTCCCACCTTGATCTACTCCATGAACTCCATC
TCCTGTCTTCTAACGGCAGTCAGGCCGAAATCCggggaaaaacttttaaa
taaaaatgttgtTGCCGTGGGCCCAGCATTAGTAACCGGCTGGCGCACCA
CGACATCTGGGGGCTCAACTTTAGATGATGAGCCTGATGGAGAGATAGAT
TATAAGGGAGAGGTACtatgaaaaaatggaaaaattcaaaaaccgaactt
tttaaaaaatacaacGACAATTTCAACATTTACAACATACAACAGCTGAA
AATCGAACCGAATTGTTTGAATGCTGAGTACTTGAATAGAATATGAAACA
CTTTCTGTATTGTTGGAGAATTGTTTAATCGCTATGGTGGGTGTGGTTCT
TGTTAGAACAGTTTGACATAGTTCAATACCTCAAGTCCACTTACAAGTTC
TTTCAGCGATATACAAACTCTGCATTTTGTCTTAGCTTGCCTAGTTGCGT
TTACCTTCGCACAATTCCAAGCTCAGACAAACCTAGAAGTTCAAATTATC
GCCTTAAGAATCTAAAATGAACGTCTGGCAGCGATGTACGACAAGAAACC
AACTATTTCGACCGTATTTATCGAATCAATTTTCCTCTCGGGACGTTCGG
ACATTGGGCGAGTGGCAGCTGAGGCATTAATCCACGATTTACTTGAAAAA
CTACGACAATTATTTCCTCGTTTAGTTAGTTGCCGCACTATCGACGGTAC
AATGGACATAAATtataacaataacaaacaatctttgtgaattgaaaaca
aactgtAGCTGATTTCAAACTCTTCAAATGTATGCACCTTTCACTGAAAC
TTGATACACCTGCTTGCGAGCAGCCTttcatcaaattaaaatttgattgc
TTACCCATTTTTCAAACTATAACTTATGATTTATTGATACCCAAATTACC
GTCAGCCACGCCCCGAATCATGAACAATAATGAACAAACGTTGTATAGAA
ACCACATGTTAAATCAAACCCAAGCAACTTAATTACTAATGCTCTGATTT
GATTATTTGTGGAAACCAAACGTCTATAGCAGCGTCCAACATGGATTCAA
TCGATTTTTAAACCGATGGCCGCTCTTCAGATAACCACCAACCTTGTGTC
GGATACGATGTGACTATTGAAAACGTCCACGACTGCTCCTCTTTTGTTTA
TGAGCCAATCACATTGATGTTTATCGTACAAACTATTTGTATTGAGATCA
TATGAATCACCTAAACGTTGACCACGATGACTTTCCGATTTTCGATGAGT
ATGATAAGACTTTTAGATCTTTCTTAGCTGATTTTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00067058-exon-scaffold_462-1491911889:824268..826104 | TCONS_00067058-exon-scaffold_462-1491911889:824268..826104 | Clytia hemisphaerica | exon |
| TCONS_00067058-exon-scaffold_462-1510915933:824268..826104 | TCONS_00067058-exon-scaffold_462-1510915933:824268..826104 | Clytia hemisphaerica | exon |
| TCONS_00067058-exon-scaffold_462-1575043694:824268..826104 | TCONS_00067058-exon-scaffold_462-1575043694:824268..826104 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_462 | supercontig | scaffold_462:824268..826104 . |
Blast
The following BLAST results are available for this feature:
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