|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00067026 ID=TCONS_00067026|Name=TCONS_00067026|organism=Clytia hemisphaerica|type=transcript|length=1230bp
tcaggcaaattgaccgacgggtatgtgcggcggttaagggtatgtttttc
aaaatatcagaaatgcactgtaagggtggacttttgataaatgcactgta
agggtggaactttcagcaaatctgggaaaaattgcaaatttttgctcgaa
aatgttgatttttttttgctctaaaagagtttaaaNtatatcagcataat
ataacaaaaggcagacactgccctgatatgaaatatgtgtctgatataaa
acgggaacacttatgtaaaaataaaacctttaaagtaacTTTGGGGATGA
ACTAATTTTTTGGGTTTGGAAAACAGTTCAGTTAGTTCTCCTGATATTTT
GATACAttcttttgttatatttttagaGAATTATTTTAGAAAgtgaaagt
ttttaaaaaaaacttttgacaccaaattaagaaatttaaaaCGACATTAT
TAGgacaatatttatttttaaattaagaTATTTTGATTCGAACCCACGGA
ATGGATTATGACATTTTGCTACGTCTCACTAAAGGTTAAAGTTTAACTTG
ACAAAATCTAAAGTTAGGTGCATCGGCAGTGTTGTTGGTTTGAAAATAGA
AGAAGTTTCAAAACAGTTTTTGAAACGGCCTTGGCATTGCAGGAAAAACT
CTATGACTACGATGACATTGCTATGATTAAGATAAAGTTCTTTTACAGTT
ATTTTTTAAACGCAGTAGATTGTTTGAAAACATCCAGCGTTGAAGACCGA
ATTTAAATTTactgtttttctcaaaaatatttgaaagccCCCATATCAAA
AACCCGCCTGCGGTGGCTGCAACCCTTCTCTGCTCTGGAGAAATTGACTA
AAGACGTTCACTAGGAGAAAATTTCTGAACTTTCTAACTAccaaaaaaac
taaaagaaaagtAACAGATGCTAAATTAAATTCTCACTGGGTTACTGAGA
CAAAAGCTGCACTCGATCTAATCCGTAAAATCAGGAAACGTTTGTAAAGG
TCTAGTAGCCTAGGATGAAGAGTTCTATGATTGAGCAAGCAAAGCGTCCT
AGCCTCATCCCTGGTATAACTCAACGATACGATAGGTTTAGTTTTATATG
AACTATCTATctattattgtattattttatCAATTCTTCAGTTAAGTCGT
TTTTAAGTCTCTATTAATGATACTAGGCATTATGTTATTTAATGAGAAAT
ATAAAGAGATTATTTTATCTTATGTTATAA Run BLAST on NCBI transcript from alignment at scaffold_462:122890..124119 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00067026 ID=TCONS_00067026|Name=TCONS_00067026|organism=Clytia hemisphaerica|type=transcript|length=1230bp|location=Sequence derived from alignment at scaffold_462:122890..124119 (Clytia hemisphaerica)
TTATAACATAAGATAAAATAATCTCTTTATATTTCTCATTAAATAACATA
ATGCCTAGTATCATTAATAGAGACTTAAAAACGACTTAACTGAAGAATTG
ataaaataatacaataatagATAGATAGTTCATATAAAACTAAACCTATC
GTATCGTTGAGTTATACCAGGGATGAGGCTAGGACGCTTTGCTTGCTCAA
TCATAGAACTCTTCATCCTAGGCTACTAGACCTTTACAAACGTTTCCTGA
TTTTACGGATTAGATCGAGTGCAGCTTTTGTCTCAGTAACCCAGTGAGAA
TTTAATTTAGCATCTGTTacttttcttttagtttttttggTAGTTAGAAA
GTTCAGAAATTTTCTCCTAGTGAACGTCTTTAGTCAATTTCTCCAGAGCA
GAGAAGGGTTGCAGCCACCGCAGGCGGGTTTTTGATATGGGggctttcaa
atatttttgagaaaaacagtAAATTTAAATTCGGTCTTCAACGCTGGATG
TTTTCAAACAATCTACTGCGTTTAAAAAATAACTGTAAAAGAACTTTATC
TTAATCATAGCAATGTCATCGTAGTCATAGAGTTTTTCCTGCAATGCCAA
GGCCGTTTCAAAAACTGTTTTGAAACTTCTTCTATTTTCAAACCAACAAC
ACTGCCGATGCACCTAACTTTAGATTTTGTCAAGTTAAACTTTAACCTTT
AGTGAGACGTAGCAAAATGTCATAATCCATTCCGTGGGTTCGAATCAAAA
TAtcttaatttaaaaataaatattgtcCTAATAATGTCGttttaaatttc
ttaatttggtgtcaaaagttttttttaaaaactttcacTTTCTAAAATAA
TTCtctaaaaatataacaaaagaaTGTATCAAAATATCAGGAGAACTAAC
TGAACTGTTTTCCAAACCCAAAAAATTAGTTCATCCCCAAAgttacttta
aaggttttatttttacataagtgttcccgttttatatcagacacatattt
catatcagggcagtgtctgccttttgttatattatgctgatataNtttaa
actcttttagagcaaaaaaaaatcaacattttcgagcaaaaatttgcaat
ttttcccagatttgctgaaagttccacccttacagtgcatttatcaaaag
tccacccttacagtgcatttctgatattttgaaaaacatacccttaaccg
ccgcacatacccgtcggtcaatttgcctga
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00067026-exon-scaffold_462-1491911889:122890..124119 | TCONS_00067026-exon-scaffold_462-1491911889:122890..124119 | Clytia hemisphaerica | exon |
| TCONS_00067026-exon-scaffold_462-1510915933:122890..124119 | TCONS_00067026-exon-scaffold_462-1510915933:122890..124119 | Clytia hemisphaerica | exon |
| TCONS_00067026-exon-scaffold_462-1575043694:122890..124119 | TCONS_00067026-exon-scaffold_462-1575043694:122890..124119 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_462 | supercontig | scaffold_462:122890..124119 . |
Blast
The following BLAST results are available for this feature:
|
