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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00066866 ID=TCONS_00066866|Name=TCONS_00066866|organism=Clytia hemisphaerica|type=transcript|length=3231bp
TCTAAatctaaacttttttgtttgttcATTTAGATACAATTAAATAATCA
AAGAATGAATTacgaatgaaaaaaaatatttaaaagaaaCAACATAGAAA
CACAACTGATAAAAATGGACGAAACACGTTTGACTTACAATGATTCTTAC
ACAACTGACAAGGATGAACCTTTCACAGATGAGGAATTCATCCAGTCAAA
ACGACAAAAAGCCTACCAACATCTTGGTCATTTCAACTCTGGTAGTCCTG
GATCTGCTGATGTATGGGCCAATCATCACCAACAACCCAATACTACTGGA
tttaattatcatcatcatATATCAACTGCTGGTAGTAGACCTTTATCGAG
TGGTAGTGGTCTACCTCTTATCACTCCCAGTCTTGTTCCTGTCAGTCTTC
ATCAAGTTGCTCCAAGAACCGATGATACGGAAACCCTTATTACTCCGAGG
GATCATGACCCTGCTACCACCTCTCCTGATCCTGCACCTACCAGTAGTTA
TCAAGTTACAGTCGTACCTCCACTGCTCCATTCTTATTCATCATTCAGCA
TGATCGACCCAACCTCAAGGACAAATTCACGATGCCCTAAAATGGAATGG
AAGACTCACGCACAGGATCCACTTTACGCACCAAGTATACCGACCTACAA
TGAAACAAGTGGACCAAAGTTTGATATTCCTGAGGACATAACAATCAGAA
ATTTAGTACAACTTTACCTAACGGATGACCTCCTTGACGAACTAGTACAA
AACACTAATAAGTATGCTGCCCGAACAAAAGAGTCGGAAGGAAACAAACC
CTCTAGTAGAACAAAACAATGGAGGCCTGTTACCAGATCCGAGATTCTTC
AACATATAGCGCTTGGTGTACTTATGGGCATGCGCAGCCTACCGGGGATA
TCTGATTATTGGAGCAAGGATCCTTTGTTTCATAACCCAGTCTTTGGTGC
AGTAATGAGCCGAAACAGGTATCAGCTGATCTCAAAATTCGTTCATTTTG
CTGATGAGAATGGTCCCGTTACTGAATCCACCAAAACGACCAAACTCCAC
AAGATCTTAGCCGTTTTAAACCATCTAAACCAACGGTTTAAAGATACCTA
TAATCCAACAAAGGTTTTAAACATTGGTGAATTTGCTTTAACGTCTGAAC
GAAGTCGATGCAAGGAGCCCGGGTTTGAGCATAGTGGGAGCTTGAAATTT
GTATCGCTACACGACGAAACGGGTTACGTTCTAAACACTAGTATCCACGA
AGGGAAACGTCAATTTGATCCACTTACAGAAACAATGACCAAGGTGGAGC
CAGAACAAATCACATTACAACTTGTTGGACCGTTTCTCAACAAAGGGCAT
CAACTTTACGTCAATGATGTCACTGTATCTTTAGCCAGAAACCTGATTGC
AAATAACACCGGCATTTGTGGTGAGATAGCTCCCAAACACATACAAACCA
CATTCGTAGACAATTTCACCGAACAAGATTTGAACAAGGGTGAAACGACG
CATTTAACCAATAACAAGATGCTGGCTTTACGATACAATCACCATAAAGA
GAAAGACAAATTCTACTTGTCGACAGTACATGCGCCAGAGCTGTCAGCAG
CTACTACAAAAAGAGATCGAAATGGAAATTGGGTATCCAGACAAAAACTC
GTTTTAGATTACAATAAGAATTCAGTATTAGCCGACAAACAGTATCAATC
GATTCAACAATCATCGATGGTCCGGAACTCTCACAAATGGACTACCAAAG
TCGCTTACCATCTTTTTGAAATCGCCTTCGTCAACGCACACGTTCTATAC
AGTAGCCAACCCAAAAAATCACCAGTTTCTTACTTAGACTTTAAACTTTC
TTTCGTTCGTCAAGTCTTAAGTGATTGCCCAAGATTCCTCACGATTATGG
AGAACCCAACAGCACCGAATCCATCAAAATCTGGCGAAACACAGCATTTC
TTGATGACGGTTCCTACAAAGAATCCTAAATACCCGTTCCCAAGTAAAAG
ATGTCAATTATGTCATAAGAAAGGGAAACGTAGGGAGTCGAGATATCAAT
GTGATTCTTGTATTGGAAACCCAGGGTTTTGCGTTGATCCTTGTTTCAAA
GAACATCATCAGCAACGACAAAAACAACatgaacaacaacaacataaaca
acaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaac
atcaacaGAACAATGACATCAAAACACTTGCTCCAGTGTTCGCTAAGGAA
CCTTTAGAAAAAAACAGCATTTTAGAAGAATGATATATGGTTTTCCCATT
ACTGTATGTCTTGCGTTGCCCCGGAGTGGTTAACCCTTCGTTACTAATAC
CTGAAGGACtagttttattgatttttttgtttgtgttttcaACTGCCTTC
TTAGATATTTTATATAGtaaggtgaaaataaaaaatgtagtgttttcgga
atgcgggtgaagagaaagagctctcatgcggccagccggaaaaaaatttt
ttttcgccatttttgataacttaagatcattgaaatagaactttaaagat
aactttaatgtacaaacagtatgtatgaagtaagccctgaaaactaatgt
atcaactactaacgaaaaAAACTTAATTTATAAGCGGGAATATTTAGCGA
Tttaaccaaacgacgtttgataatttgaacggtcaacttgattttcttta
tgattaaCCATAtaaacccatagtctgcggccgggtcagaattttttttt
ttcactcggccggtttccggaaacactacattgtTTTATTTTCGCCTTGC
TATTACTCTTTTGATCAAAAATTTTAAGTACTTTTTTACTTTAGAAGATG
ACATAGAGGTGGACAAAACTATTTCAGTTtatgaactttttttatttatt
tacttttgttACTGTGTGGTTACATTTTCGACAACCAATATAGTTTTTGG
TTTGTGCACTGGTGGTATGTGTGGCCCGAAACTGCACTCCTAAAATTACA
CCACTTTTTTTACTCTTAAGTGAATTCGTATTTGGATGTCTTTTTATAAA
CTACCTTTTGTGATTTATGGTTtattaccttaagagaagaaattttgtgg
AATGAACCCATTCGCCAATTTTAGTGCAATGTggtggaatttattttggc
gatttaatgaaatttctaaatttggcgagaattaattttggcgaacgagT
TCAatattttagatgaaaaaagaggaaaaag Run BLAST on NCBI protein sequence of TCONS_00066866-protein >TCONS_00066866-protein ID=TCONS_00066866-protein|Name=TCONS_00066866-protein|organism=Clytia hemisphaerica|type=polypeptide|length=722bp
MDETRLTYNDSYTTDKDEPFTDEEFIQSKRQKAYQHLGHFNSGSPGSADV
WANHHQQPNTTGFNYHHHISTAGSRPLSSGSGLPLITPSLVPVSLHQVAP
RTDDTETLITPRDHDPATTSPDPAPTSSYQVTVVPPLLHSYSSFSMIDPT
SRTNSRCPKMEWKTHAQDPLYAPSIPTYNETSGPKFDIPEDITIRNLVQL
YLTDDLLDELVQNTNKYAARTKESEGNKPSSRTKQWRPVTRSEILQHIAL
GVLMGMRSLPGISDYWSKDPLFHNPVFGAVMSRNRYQLISKFVHFADENG
PVTESTKTTKLHKILAVLNHLNQRFKDTYNPTKVLNIGEFALTSERSRCK
EPGFEHSGSLKFVSLHDETGYVLNTSIHEGKRQFDPLTETMTKVEPEQIT
LQLVGPFLNKGHQLYVNDVTVSLARNLIANNTGICGEIAPKHIQTTFVDN
FTEQDLNKGETTHLTNNKMLALRYNHHKEKDKFYLSTVHAPELSAATTKR
DRNGNWVSRQKLVLDYNKNSVLADKQYQSIQQSSMVRNSHKWTTKVAYHL
FEIAFVNAHVLYSSQPKKSPVSYLDFKLSFVRQVLSDCPRFLTIMENPTA
PNPSKSGETQHFLMTVPTKNPKYPFPSKRCQLCHKKGKRRESRYQCDSCI
GNPGFCVDPCFKEHHQQRQKQHEQQQHKQQQQQQQQQQQQQQQQQHQQNN
DIKTLAPVFAKEPLEKNSILEE Run BLAST on NCBI transcript from alignment at scaffold_462:284632..288515+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00066866 ID=TCONS_00066866|Name=TCONS_00066866|organism=Clytia hemisphaerica|type=transcript|length=3884bp|location=Sequence derived from alignment at scaffold_462:284632..288515+ (Clytia hemisphaerica)
TCTAAatctaaacttttttgtttgttcATTTAGATACAATTAAATAATCA
AAGAATGAATTacgaatgaaaaaaaatatttaaaagaaaCAACATAGAAA
CACAACTGATAAAAATGGACGAAACACGTTTGACTTACAATGATTCTTAC
ACAACTGACAAGGATGAACCTTTCACAGATGAGGAATTCATCCAGTCAAA
ACGACAAAAAGCCTACCAACATCTTGGTCATTTCAACTCTGGTAGTCCTG
GATCTGCTGATGTATGGGCCAATCATCACCAACAACCCAATACTACTGGA
tttaattatcatcatcatATATCAACTGCTGGTAGTAGACCTTTATCGAG
TGGTAGTGGTCTACCTCTTATCACTCCCAGTCTTGTTCCTGTCAGTCTTC
ATCAAGGTTCTTCCAGTCTTGTTCCCTCGACCATACCCTCTAATCTCGTT
CCGTCTGACGGTCATCAAGCAACTATCACAAGACCTCCTGGTCTTCCTAC
AAATCCAACAACTGTGATACCTAGTACCATCAGACCTAGTCTAGTTCCCA
ACAGTCACTACACGTCTACACCTGTGCAAGGCTCCCATTCTTTTTCAGTT
GCTCCAAGAACCGATGATACGGAAACCCTTATTACTCCGAGGGATCATGA
CCCTGCTACCACCTCTCCTGATCCTGCACCTACCAGTAGTTATCAAGTTA
CAGTCGTACCTCCACTGCTCCATTCTTATTCATCATTCAGCATGATCGAC
CCAACCTCAAGGACAAATTCACGATGCCCTAAAATGGAATGGAAGACTCA
CGCACAGGATCCACTTTACGCACCAAGTATACCGACCTACAATGAAACAA
GTGGACCAAAGTTTGATATTCCTGAGGACATAACAATCAGAAATTTAGTA
CAACTTTACCTAACGGATGACCTCCTTGACGAACTAGTACAAAACACTAA
TAAGTATGCTGCCCGAACAAAAGAGTCGGAAGGAAACAAACCCTCTAGTA
GAACAAAACAATGGAGGCCTGTTACCAGATCCGAGATTCTTCAACATATA
GCGCTTGGTGTACTTATGGGCATGCGCAGCCTACCGGGGATATCTGATTA
TTGGAGCAAGGATCCTTTGTTTCATAACCCAGTCTTTGGTGCAGTAATGA
GCCGAAACAGGTATAATTTCTTTAACTTTCTTGTTTCGTGAATGGTATTG
AGGTTGGTTCAGTGTagtaattttatattttaggaATCTTTTATGGCATT
TTCTGTCATTTCCACCATTCCCACTCACGCAAATGGCAGCTTTAACCTTT
TATAGTATTGTCCTCAAAGNCACCATTCTCTCTCACGCAAATGGCAGCTT
TAACCTTTTATAGTATTGTCCTCAAAGAAAACGGAATTAAACTAAAAAGA
CTCTTGATCACCAGTTTGAGTGACGTTTTAGATACAGGCAAACACAAATC
TTTCCATAGCTTGATCATCTTAGGCTAAATAAGATTCCGAGTTATTGAGA
GTCATCTGAAcgattgacattttttttagaaatttatttttctaaagtaC
TTTGGAAGCCTTGGTCTCTAGGCGagtttttcctcaaaaaatgtCATGCG
TTTTTATCTTTGTATCTTTAGGTATCAGCTGATCTCAAAATTCGTTCATT
TTGCTGATGAGAATGGTCCCGTTACTGAATCCACCAAAACGACCAAACTC
CACAAGATCTTAGCCGTTTTAAACCATCTAAACCAACGGTTTAAAGATAC
CTATAATCCAACAAAGGTTTTAAACATTGGTGAATTTGCTTTAACGTCTG
AACGAAGTCGATGCAAGGAGCCCGGGTTTGAGCATAGTGGGAGCTTGAAA
TTTGTATCGCTACACGACGAAACGGGTTACGTTCTAAACACTAGTATCCA
CGAAGGGAAACGTCAATTTGATCCACTTACAGAAACAATGACCAAGGTGG
AGCCAGAACAAATCACATTACAACTTGTTGGACCGTTTCTCAACAAAGGG
CATCAACTTTACGTCAATGATGTCACTGTATCTTTAGCCAGAAACCTGAT
TGCAAATAACACCGGCATTTGTGGTGAGATAGCTCCCAAACACATACAAA
CCACATTCGTAGACAATTTCACCGAACAAGATTTGAACAAGGGTGAAACG
ACGCATTTAACCAATAACAAGATGCTGGCTTTACGATACAATCACCATAA
AGAGAAAGACAAATTCTACTTGTCGACAGTACATGCGCCAGAGCTGTCAG
CAGCTACTACAAAAAGAGATCGAAATGGAAATTGGGTATCCAGACAAAAA
CTCGTTTTAGATTACAATAAGAATTCAGTATTAGCCGACAAACAGTATCA
ATCGATTCAACAATCATCGATGGTCCGGAACTCTCACAAATGGACTACCA
AAGTCGCTTACCATCTTTTTGAAATCGCCTTCGTCAACGCACACGTTCTA
TACAGTAGCCAACCCAAAAAATCACCAGTTTCTTACTTAGACTTTAAACT
TTCTTTCGTTCGTCAAGTCTTAAGTGATTGCCCAAGATTCCTCACGATTA
TGGAGAACCCAACAGCACCGAATCCATCAAAATCTGGCGAAACACAGCAT
TTCTTGATGACGGTTCCTACAAAGAATCCTAAATACCCGTTCCCAAGTAA
AAGATGTCAATTATGTCATAAGAAAGGGAAACGTAGGGAGTCGAGATATC
AATGTGATTCTTGTATTGGAAACCCAGGGTTTTGCGTTGATCCTTGTTTC
AAAGAACATCATCAGCAACGACAAAAACAACatgaacaacaacaacataa
acaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaac
aacatcaacaGAACAATGACATCAAAACACTTGCTCCAGTGTTCGCTAAG
GAACCTTTAGAAAAAAACAGCATTTTAGAAGAATGATATATGGTTTTCCC
ATTACTGTATGTCTTGCGTTGCCCCGGAGTGGTTAACCCTTCGTTACTAA
TACCTGAAGGACtagttttattgatttttttgtttgtgttttcaACTGCC
TTCTTAGATATTTTATATAGtaaggtgaaaataaaaaatgtagtgttttc
ggaatgcgggtgaagagaaagagctctcatgcggccagccggaaaaaaat
tttttttcgccatttttgataacttaagatcattgaaatagaactttaaa
gataactttaatgtacaaacagtatgtatgaagtaagccctgaaaactaa
tgtatcaactactaacgaaaaAAACTTAATTTATAAGCGGGAATATTTAG
CGATttaaccaaacgacgtttgataatttgaacggtcaacttgattttct
ttatgattaaCCATAtaaacccatagtctgcggccgggtcagaatttttt
tttttcactcggccggtttccggaaacactacattgtTTTATTTTCGCCT
TGCTATTACTCTTTTGATCAAAAATTTTAAGTACTTTTTTACTTTAGAAG
ATGACATAGAGGTGGACAAAACTATTTCAGTTtatgaactttttttattt
atttacttttgttACTGTGTGGTTACATTTTCGACAACCAATATAGTTTT
TGGTTTGTGCACTGGTGGTATGTGTGGCCCGAAACTGCACTCCTAAAATT
ACACCACTTTTTTTACTCTTAAGTGAATTCGTATTTGGATGTCTTTTTAT
AAACTACCTTTTGTGATTTATGGTTtattaccttaagagaagaaattttg
tggAATGAACCCATTCGCCAATTTTAGTGCAATGTggtggaatttatttt
ggcgatttaatgaaatttctaaatttggcgagaattaattttggcgaacg
agTTCAatattttagatgaaaaaagaggaaaaag Coding sequence (CDS) from alignment at scaffold_462:284632..288515+ >TCONS_00066866 ID=TCONS_00066866|Name=TCONS_00066866|organism=Clytia hemisphaerica|type=CDS|length=6507bp|location=Sequence derived from alignment at scaffold_462:284632..288515+ (Clytia hemisphaerica)
ATGGACGAAACACGTTTGACTTACAATGATTCTTACACAACTGACAAGGA
TGAACCTTTCACAGATGAGGAATTCATCCAGTCAAAACGACAAAAAGCCT
ACCAACATCTTGGTCATTTCAACTCTGGTAGTCCTGGATCTGCTGATGTA
TGGGCCAATCATCACCAACAACCCAATACTACTGGAtttaattatcatca
tcatATATCAACTGCTGGTAGTAGACCTTTATCGAGTGGTAGTGGTCTAC
CTCTTATCACTCCCAGTCTTGTTCCTGTCAGTCTTCATCAAGTTGCTCCA
AGAACCGATGATACGGAAACCCTTATTACTCCGAGGGATCATGACCCTGC
TACCACCTCTCCTGATCCTGCACCTACCAGTAGTTATCAAGTTACAGTCG
TACCTCCACTGCTCCATTCTTATTCATCATTCAGCATGATCGACCCAACC
TCAAGGACAAATTCACGATGCCCTAAAATGGAATGGAAGACTCACGCACA
GGATCCACTTTACGCACCAAGTATACCGACCTACAATGAAACAAGTGGAC
CAAAGTTTGATATTCCTGAGGACATAACAATCAGAAATTTAGTACAACTT
TACCTAACGGATGACCTCCTTGACGAACTAGTACAAAACACTAATAAGTA
TGCTGCCCGAACAAAAGAGTCGGAAGGAAACAAACCCTCTAGTAGAACAA
AACAATGGAGGCCTGTTACCAGATCCGAGATTCTTCAACATATAGCGCTT
GGTGTACTTATGGGCATGCGCAGCCTACCGGGGATATCTGATTATTGGAG
CAAGGATCCTTTGTTTCATAACCCAGTCTTTGGTGCAGTAATGAGCCGAA
ACAGGTATCAGCTGATCTCAAAATTCGTTCATTTTGCTGATGAGAATGGT
CCCGTTACTGAATCCACCAAAACGACCAAACTCCACAAGATCTTAGCCGT
TTTAAACCATCTAAACCAACGGTTTAAAGATACCTATAATCCAACAAAGG
TTTTAAACATTGGTGAATTTGCTTTAACGTCTGAACGAAGTCGATGCAAG
GAGCCCGGGTTTGAGCATAGTGGGAGCTTGAAATTTGTATCGCTACACGA
CGAAACGGGTTACGTTCTAAACACTAGTATCCACGAAGGGAAACGTCAAT
TTGATCCACTTACAGAAACAATGACCAAGGTGGAGCCAGAACAAATCACA
TTACAACTTGTTGGACCGTTTCTCAACAAAGGGCATCAACTTTACGTCAA
TGATGTCACTGTATCTTTAGCCAGAAACCTGATTGCAAATAACACCGGCA
TTTGTGGTGAGATAGCTCCCAAACACATACAAACCACATTCGTAGACAAT
TTCACCGAACAAGATTTGAACAAGGGTGAAACGACGCATTTAACCAATAA
CAAGATGCTGGCTTTACGATACAATCACCATAAAGAGAAAGACAAATTCT
ACTTGTCGACAGTACATGCGCCAGAGCTGTCAGCAGCTACTACAAAAAGA
GATCGAAATGGAAATTGGGTATCCAGACAAAAACTCGTTTTAGATTACAA
TAAGAATTCAGTATTAGCCGACAAACAGTATCAATCGATTCAACAATCAT
CGATGGTCCGGAACTCTCACAAATGGACTACCAAAGTCGCTTACCATCTT
TTTGAAATCGCCTTCGTCAACGCACACGTTCTATACAGTAGCCAACCCAA
AAAATCACCAGTTTCTTACTTAGACTTTAAACTTTCTTTCGTTCGTCAAG
TCTTAAGTGATTGCCCAAGATTCCTCACGATTATGGAGAACCCAACAGCA
CCGAATCCATCAAAATCTGGCGAAACACAGCATTTCTTGATGACGGTTCC
TACAAAGAATCCTAAATACCCGTTCCCAAGTAAAAGATGTCAATTATGTC
ATAAGAAAGGGAAACGTAGGGAGTCGAGATATCAATGTGATTCTTGTATT
GGAAACCCAGGGTTTTGCGTTGATCCTTGTTTCAAAGAACATCATCAGCA
ACGACAAAAACAACatgaacaacaacaacataaacaacaacaacaacaac
aacaacaacaacaacaacaacaacaacaacaacaacatcaacaGAACAAT
GACATCAAAACACTTGCTCCAGTGTTCGCTAAGGAACCTTTAGAAAAAAA
CAGCATTTTAGAAGAATGAATGGACGAAACACGTTTGACTTACAATGATT
CTTACACAACTGACAAGGATGAACCTTTCACAGATGAGGAATTCATCCAG
TCAAAACGACAAAAAGCCTACCAACATCTTGGTCATTTCAACTCTGGTAG
TCCTGGATCTGCTGATGTATGGGCCAATCATCACCAACAACCCAATACTA
CTGGAtttaattatcatcatcatATATCAACTGCTGGTAGTAGACCTTTA
TCGAGTGGTAGTGGTCTACCTCTTATCACTCCCAGTCTTGTTCCTGTCAG
TCTTCATCAAGTTGCTCCAAGAACCGATGATACGGAAACCCTTATTACTC
CGAGGGATCATGACCCTGCTACCACCTCTCCTGATCCTGCACCTACCAGT
AGTTATCAAGTTACAGTCGTACCTCCACTGCTCCATTCTTATTCATCATT
CAGCATGATCGACCCAACCTCAAGGACAAATTCACGATGCCCTAAAATGG
AATGGAAGACTCACGCACAGGATCCACTTTACGCACCAAGTATACCGACC
TACAATGAAACAAGTGGACCAAAGTTTGATATTCCTGAGGACATAACAAT
CAGAAATTTAGTACAACTTTACCTAACGGATGACCTCCTTGACGAACTAG
TACAAAACACTAATAAGTATGCTGCCCGAACAAAAGAGTCGGAAGGAAAC
AAACCCTCTAGTAGAACAAAACAATGGAGGCCTGTTACCAGATCCGAGAT
TCTTCAACATATAGCGCTTGGTGTACTTATGGGCATGCGCAGCCTACCGG
GGATATCTGATTATTGGAGCAAGGATCCTTTGTTTCATAACCCAGTCTTT
GGTGCAGTAATGAGCCGAAACAGGTATCAGCTGATCTCAAAATTCGTTCA
TTTTGCTGATGAGAATGGTCCCGTTACTGAATCCACCAAAACGACCAAAC
TCCACAAGATCTTAGCCGTTTTAAACCATCTAAACCAACGGTTTAAAGAT
ACCTATAATCCAACAAAGGTTTTAAACATTGGTGAATTTGCTTTAACGTC
TGAACGAAGTCGATGCAAGGAGCCCGGGTTTGAGCATAGTGGGAGCTTGA
AATTTGTATCGCTACACGACGAAACGGGTTACGTTCTAAACACTAGTATC
CACGAAGGGAAACGTCAATTTGATCCACTTACAGAAACAATGACCAAGGT
GGAGCCAGAACAAATCACATTACAACTTGTTGGACCGTTTCTCAACAAAG
GGCATCAACTTTACGTCAATGATGTCACTGTATCTTTAGCCAGAAACCTG
ATTGCAAATAACACCGGCATTTGTGGTGAGATAGCTCCCAAACACATACA
AACCACATTCGTAGACAATTTCACCGAACAAGATTTGAACAAGGGTGAAA
CGACGCATTTAACCAATAACAAGATGCTGGCTTTACGATACAATCACCAT
AAAGAGAAAGACAAATTCTACTTGTCGACAGTACATGCGCCAGAGCTGTC
AGCAGCTACTACAAAAAGAGATCGAAATGGAAATTGGGTATCCAGACAAA
AACTCGTTTTAGATTACAATAAGAATTCAGTATTAGCCGACAAACAGTAT
CAATCGATTCAACAATCATCGATGGTCCGGAACTCTCACAAATGGACTAC
CAAAGTCGCTTACCATCTTTTTGAAATCGCCTTCGTCAACGCACACGTTC
TATACAGTAGCCAACCCAAAAAATCACCAGTTTCTTACTTAGACTTTAAA
CTTTCTTTCGTTCGTCAAGTCTTAAGTGATTGCCCAAGATTCCTCACGAT
TATGGAGAACCCAACAGCACCGAATCCATCAAAATCTGGCGAAACACAGC
ATTTCTTGATGACGGTTCCTACAAAGAATCCTAAATACCCGTTCCCAAGT
AAAAGATGTCAATTATGTCATAAGAAAGGGAAACGTAGGGAGTCGAGATA
TCAATGTGATTCTTGTATTGGAAACCCAGGGTTTTGCGTTGATCCTTGTT
TCAAAGAACATCATCAGCAACGACAAAAACAACatgaacaacaacaacat
aaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaaca
acaacatcaacaGAACAATGACATCAAAACACTTGCTCCAGTGTTCGCTA
AGGAACCTTTAGAAAAAAACAGCATTTTAGAAGAATGAATGGACGAAACA
CGTTTGACTTACAATGATTCTTACACAACTGACAAGGATGAACCTTTCAC
AGATGAGGAATTCATCCAGTCAAAACGACAAAAAGCCTACCAACATCTTG
GTCATTTCAACTCTGGTAGTCCTGGATCTGCTGATGTATGGGCCAATCAT
CACCAACAACCCAATACTACTGGAtttaattatcatcatcatATATCAAC
TGCTGGTAGTAGACCTTTATCGAGTGGTAGTGGTCTACCTCTTATCACTC
CCAGTCTTGTTCCTGTCAGTCTTCATCAAGTTGCTCCAAGAACCGATGAT
ACGGAAACCCTTATTACTCCGAGGGATCATGACCCTGCTACCACCTCTCC
TGATCCTGCACCTACCAGTAGTTATCAAGTTACAGTCGTACCTCCACTGC
TCCATTCTTATTCATCATTCAGCATGATCGACCCAACCTCAAGGACAAAT
TCACGATGCCCTAAAATGGAATGGAAGACTCACGCACAGGATCCACTTTA
CGCACCAAGTATACCGACCTACAATGAAACAAGTGGACCAAAGTTTGATA
TTCCTGAGGACATAACAATCAGAAATTTAGTACAACTTTACCTAACGGAT
GACCTCCTTGACGAACTAGTACAAAACACTAATAAGTATGCTGCCCGAAC
AAAAGAGTCGGAAGGAAACAAACCCTCTAGTAGAACAAAACAATGGAGGC
CTGTTACCAGATCCGAGATTCTTCAACATATAGCGCTTGGTGTACTTATG
GGCATGCGCAGCCTACCGGGGATATCTGATTATTGGAGCAAGGATCCTTT
GTTTCATAACCCAGTCTTTGGTGCAGTAATGAGCCGAAACAGGTATCAGC
TGATCTCAAAATTCGTTCATTTTGCTGATGAGAATGGTCCCGTTACTGAA
TCCACCAAAACGACCAAACTCCACAAGATCTTAGCCGTTTTAAACCATCT
AAACCAACGGTTTAAAGATACCTATAATCCAACAAAGGTTTTAAACATTG
GTGAATTTGCTTTAACGTCTGAACGAAGTCGATGCAAGGAGCCCGGGTTT
GAGCATAGTGGGAGCTTGAAATTTGTATCGCTACACGACGAAACGGGTTA
CGTTCTAAACACTAGTATCCACGAAGGGAAACGTCAATTTGATCCACTTA
CAGAAACAATGACCAAGGTGGAGCCAGAACAAATCACATTACAACTTGTT
GGACCGTTTCTCAACAAAGGGCATCAACTTTACGTCAATGATGTCACTGT
ATCTTTAGCCAGAAACCTGATTGCAAATAACACCGGCATTTGTGGTGAGA
TAGCTCCCAAACACATACAAACCACATTCGTAGACAATTTCACCGAACAA
GATTTGAACAAGGGTGAAACGACGCATTTAACCAATAACAAGATGCTGGC
TTTACGATACAATCACCATAAAGAGAAAGACAAATTCTACTTGTCGACAG
TACATGCGCCAGAGCTGTCAGCAGCTACTACAAAAAGAGATCGAAATGGA
AATTGGGTATCCAGACAAAAACTCGTTTTAGATTACAATAAGAATTCAGT
ATTAGCCGACAAACAGTATCAATCGATTCAACAATCATCGATGGTCCGGA
ACTCTCACAAATGGACTACCAAAGTCGCTTACCATCTTTTTGAAATCGCC
TTCGTCAACGCACACGTTCTATACAGTAGCCAACCCAAAAAATCACCAGT
TTCTTACTTAGACTTTAAACTTTCTTTCGTTCGTCAAGTCTTAAGTGATT
GCCCAAGATTCCTCACGATTATGGAGAACCCAACAGCACCGAATCCATCA
AAATCTGGCGAAACACAGCATTTCTTGATGACGGTTCCTACAAAGAATCC
TAAATACCCGTTCCCAAGTAAAAGATGTCAATTATGTCATAAGAAAGGGA
AACGTAGGGAGTCGAGATATCAATGTGATTCTTGTATTGGAAACCCAGGG
TTTTGCGTTGATCCTTGTTTCAAAGAACATCATCAGCAACGACAAAAACA
ACatgaacaacaacaacataaacaacaacaacaacaacaacaacaacaac
aacaacaacaacaacaacaacaacatcaacaGAACAATGACATCAAAACA
CTTGCTCCAGTGTTCGCTAAGGAACCTTTAGAAAAAAACAGCATTTTAGA
AGAATGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00066866-exon-scaffold_462-1491911889:284632..285037 | TCONS_00066866-exon-scaffold_462-1491911889:284632..285037 | Clytia hemisphaerica | exon |
| TCONS_00066866-exon-scaffold_462-1510915933:284632..285037 | TCONS_00066866-exon-scaffold_462-1510915933:284632..285037 | Clytia hemisphaerica | exon |
| TCONS_00066866-exon-scaffold_462-1575043694:284632..285037 | TCONS_00066866-exon-scaffold_462-1575043694:284632..285037 | Clytia hemisphaerica | exon |
| TCONS_00066866-exon-scaffold_462-1491911889:285230..285791 | TCONS_00066866-exon-scaffold_462-1491911889:285230..285791 | Clytia hemisphaerica | exon |
| TCONS_00066866-exon-scaffold_462-1510915933:285230..285791 | TCONS_00066866-exon-scaffold_462-1510915933:285230..285791 | Clytia hemisphaerica | exon |
| TCONS_00066866-exon-scaffold_462-1575043694:285230..285791 | TCONS_00066866-exon-scaffold_462-1575043694:285230..285791 | Clytia hemisphaerica | exon |
| TCONS_00066866-exon-scaffold_462-1491911889:286253..288515 | TCONS_00066866-exon-scaffold_462-1491911889:286253..288515 | Clytia hemisphaerica | exon |
| TCONS_00066866-exon-scaffold_462-1510915933:286253..288515 | TCONS_00066866-exon-scaffold_462-1510915933:286253..288515 | Clytia hemisphaerica | exon |
| TCONS_00066866-exon-scaffold_462-1575043694:286253..288515 | TCONS_00066866-exon-scaffold_462-1575043694:286253..288515 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_462 | supercontig | scaffold_462:284632..288515 + |
Annotated Terms
The following terms have been associated with this transcript:
Blast
BLAST of TCONS_00066866 vs. Swiss-Prot (Human)
Match: PGBD4 (PiggyBac transposable element-derived protein 4 OS=Homo sapiens GN=PGBD4 PE=2 SV=3) HSP 1 Score: 152.14 bits (383), Expect = 2.856e-38 Identity = 132/523 (25.24%), Postives = 235/523 (44.93%), Query Frame = 1
Query: 592 MEWKTHAQDPLYAPSIPTYNETSGPKFDIPEDITIRNLVQLYLTDDLLDELVQNTNKYAAR-TKESEGNKPSSRTKQWRPVTRSEILQHIALGVLMGMRSLPGISDYWSKDPLFHNPVFGAVMSRNRYQLISKFVHFADENG-PVTESTKTTKLHKILAVLNHLNQRFKDTYNPTKVLNIGEFALTSERSRCKE---PGFEHSGSLK-FVSLHDETGYVLNTSIHEGKRQFDPLTETMTKVEPEQITLQLVGPFLNKGHQLYVNDVTVS--LARNLIANNTGICGEIAPKHIQTTFVDNFTEQDLNKGETTHLTNNKMLALRYNHHKEKDKFYLSTVHAPELSAATTKRDRNGNWVSRQKLVLDYNKNSVLADKQYQSIQQSSMVRNSHK-WTTKVAYHLFEIAFVNAHVLYSSQPKKSPVSYLDFKLSFVRQVLSD--CPRFLTIMENPTAPNPSK---SGETQHFLMTVPTKNPKYPFPSKRCQLC----HKKGK--RRESRYQCDSCIGNPGFCVDPCFK 2100
M+W A P + T G K D+ + +L+ T++L+ ++ + TN AA + G K SR +W+ E+ A+ +L G+ P + +WS PL P +M+ R+ L+ + +HF + + +S L KI V + L +F Y P + + + E + + + P LK +V ++GYV N +H G L ++ ++ +I L LV L +G+ +++++ +S L R L N T G Q + N ++ + KG T +++AL++ KE LST H + +RNG R ++++DYN+N D Q + R HK W K +HL I +N+++L+ + +S+++F+L+ + ++L P + P + + + SG +HF ++P + K P+ RC++C K GK R+E+RY C C + CV PCF+
Sbjct: 73 MKWSARAMIPRQRYD---FTGTPGRKVDVSDITDPLQYFELFFTEELVSKITRETNAQAALLASKPPGPKGFSRMDKWKDTDNDELKVFFAVMLLQGIVQKPELEMFWSTRPLLDTPYLRQIMTGERFLLLFRCLHFVNNSSISAGQSKAQISLQKIKPVFDFLVNKFSTVYTPNRNIAVDESLMLFKGPLAMKQYLPTKRVRFGLKLYVLCESQSGYVWNALVHTGPGM--NLKDSADGLKSSRIVLTLVNDLLGQGYCVFLDNFNISPMLFRELHQNRTDAVGTARLNRKQ---IPNDLKKRIAKGTTVARFCGELMALKWCDGKEVT--MLSTFHNDTVIEVN---NRNGKKTKRPRVIVDYNENMGAVDSADQMLTSYPSERKRHKVWYKKFFHHLLHITVLNSYILFKKDNPEHTMSHINFRLALIERMLEKHHKPGQQHLRGRPCSDDVTPLRLSG--RHFPKSIPATSGKQN-PTGRCKICCSQYDKDGKKIRKETRYFCAEC--DVPLCVVPCFE 577
The following BLAST results are available for this feature:
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