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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00066852 ID=TCONS_00066852|Name=TCONS_00066852|organism=Clytia hemisphaerica|type=transcript|length=1182bp
TTagcttttttctttcagtttgtgTATGCTATGCGTTAAAAAAGTGGTGC
ATCGATatttacaatttaaaaaatataatataaacgAGAcgtgtgaaaaa
aaatttcataaatagtTTTTTTAGGTGTGAATAAGAAAGTGAATAATGCT
GATATGCATGTTCTTTTACAGCAGGATAAAGTagatataaatatttataa
tacgCCACCCGGTCGGGGGCATGACGCATGACCTTGACAACCGACGGGGT
CGTGccgttggagtttgaaaagtggactcTGTCAGATATAAATTTTTGgt
aaataaatttgaaatccTGTCAGAGCGTCCTcaacttctcacagacctgg
taagACTTTTTCAGTAATTGTGGGTAAAACAACGGAATAAATTAAACTTG
ATATTCCCAAATGTTCTTTTATGGCTCCCGGTTTGAATTTcatattgttt
tcaagtcagataATTTTGTGGGGATagaaaaaaatagcacaatatctGTT
CTGNaatttttttcaagtcagatAATTTTGTGGGGATagaaaaaaatagc
acaatatctGTTCTGTGGGAACAAATGTTGGACAAATGTTGGAGTGTAAT
TTCCACtgaggacgatattttggccgatttttccCGTGGGAGAAGCTCTT
ACCGGGTCCGTGAGAAGAGAGTGTCTTTATGTTACAAATTTCAGTATAAA
AATGGTCACCTAAAGGTCACCCAGCAAACGATTAAGATGGATATTTTATT
TACAAcatgaaatcttcaaaaaaagctGCAATGAAAATTCCACGTACGTA
AGTTTTAGAGGCAATGCTATCTAGCAAGGtaaaaaaatcgggaaatttca
acattttcgcgagcataaactcgAATTGCCTTGTAAAGAATTTTGTTGAA
CGACGTGTCAAAGAGATTCATTATGAATGAATACTATTGGTCATTCGCTA
GACTCTGGTGGCGGATGAATAGTCACTGTGGTTGAATGTTGCTCCCCAGG
ATCATCATTGGCCACCGTATTTTCTGGCTGATGTGAATCGTTAGTTTCAC
TTCTGTTAGTTACCGGTGGCTCATCAATGTCATCATTATTGCGTTCTGTT
TCCTGTATGAAATCATCGTCGTCCTCATCGtcgttttgatgaaaaatgaa
ttgCGTAATTTCCGTTGTATTTTCGTCGACAT Run BLAST on NCBI transcript from alignment at scaffold_461:13309..14490 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00066852 ID=TCONS_00066852|Name=TCONS_00066852|organism=Clytia hemisphaerica|type=transcript|length=1182bp|location=Sequence derived from alignment at scaffold_461:13309..14490 (Clytia hemisphaerica)
ATGTCGACGAAAATACAACGGAAATTACGcaattcatttttcatcaaaac
gaCGATGAGGACGACGATGATTTCATACAGGAAACAGAACGCAATAATGA
TGACATTGATGAGCCACCGGTAACTAACAGAAGTGAAACTAACGATTCAC
ATCAGCCAGAAAATACGGTGGCCAATGATGATCCTGGGGAGCAACATTCA
ACCACAGTGACTATTCATCCGCCACCAGAGTCTAGCGAATGACCAATAGT
ATTCATTCATAATGAATCTCTTTGACACGTCGTTCAACAAAATTCTTTAC
AAGGCAATTcgagtttatgctcgcgaaaatgttgaaatttcccgattttt
ttaCCTTGCTAGATAGCATTGCCTCTAAAACTTACGTACGTGGAATTTTC
ATTGCagctttttttgaagatttcatgTTGTAAATAAAATATCCATCTTA
ATCGTTTGCTGGGTGACCTTTAGGTGACCATTTTTATACTGAAATTTGTA
ACATAAAGACACTCTCTTCTCACGGACCCGGTAAGAGCTTCTCCCACGgg
aaaaatcggccaaaatatcgtcctcaGTGGAAATTACACTCCAACATTTG
TCCAACATTTGTTCCCACAGAACagatattgtgctatttttttctATCCC
CACAAAATTatctgacttgaaaaaaattNCAGAACagatattgtgctatt
tttttctATCCCCACAAAATtatctgacttgaaaacaatatgAAATTCAA
ACCGGGAGCCATAAAAGAACATTTGGGAATATCAAGTTTAATTTATTCCG
TTGTTTTACCCACAATTACTGAAAAAGTcttaccaggtctgtgagaagtt
gAGGACGCTCTGACAggatttcaaatttatttacCAAAAATTTATATCTG
ACAgagtccacttttcaaactccaacggCACGACCCCGTCGGTTGTCAAG
GTCATGCGTCATGCCCCCGACCGGGTGGcgtattataaatatttatatct
ACTTTATCCTGCTGTAAAAGAACATGCATATCAGCATTATTCACTTTCTT
ATTCACACCTAAAAAAactatttatgaaattttttttcacacgTCTcgtt
tatattatattttttaaattgtaaatATCGATGCACCACTTTTTTAACGC
ATAGCATAcacaaactgaaagaaaaaagctAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00066852-exon-scaffold_461-1491911889:13309..14490 | TCONS_00066852-exon-scaffold_461-1491911889:13309..14490 | Clytia hemisphaerica | exon |
| TCONS_00066852-exon-scaffold_461-1510915933:13309..14490 | TCONS_00066852-exon-scaffold_461-1510915933:13309..14490 | Clytia hemisphaerica | exon |
| TCONS_00066852-exon-scaffold_461-1575043694:13309..14490 | TCONS_00066852-exon-scaffold_461-1575043694:13309..14490 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_461 | supercontig | scaffold_461:13309..14490 . |
Blast
The following BLAST results are available for this feature:
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